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The map label for this gene is oppB [H]

Identifier: 159897753

GI number: 159897753

Start: 1416654

End: 1417661

Strand: Direct

Name: oppB [H]

Synonym: Haur_1224

Alternate gene names: 159897753

Gene position: 1416654-1417661 (Clockwise)

Preceding gene: 159897752

Following gene: 159897754

Centisome position: 22.32

GC content: 46.53

Gene sequence:

>1008_bases
ATGATTGGCTTTATAATTCGTCGCGTCTTGGCGATGATTCCGGTGTTGTTTCTCGTGGCACTCATTACTTTTTTTATGAT
GAAACAGGCCAAAGGTGGGCCATTTGATCAAGAAAAGGAAGTTGCCCCGTCAACGATTGCCCTGCTGAATCGCAAATTTG
GTTTAGATAAACCCGCTTGGCTCAATTCGGCAGAATTTAGTAATCGCTTGAGTACCGAAGGTAACCCCTTTTTGGCGCTG
CGTGGCTTGTTCGATAGCCAATTTGGCAACTATCTGATCAATGCCGTCCAAGGCGATTTAGGCCCCACCTATGCTTCGAA
AGGCACCGAAACAGTTCAAGATAAAATCAAAGAAACGTTTCCAATTTCGTTGCGCCTTGGCATGATTTCGTTGGCCTTTG
CGCTGTTGGTGGGCTTTCCCCTCGGCATTTTGGGGGCTTTGCGCCAAAATACGATCTTCGATTACTTTAGCCTGATCATC
TCAACCATCGGCTTTTCGGTGCCAACCTTTGTAACTGGTTTGCTATTGCTGCTGGTTATGAGCAAGGTGTTTGATGTTGC
TCCGATCAAAGATCCCTCGGTTTGGCAAGGCTTTAGTACCTCGTATATTCCACCAGCAATCATTTTGGGCTTAGGCACAA
TGGCTTATATTACTCGTTTGACCCGCAGTAGTGTGCTTGAGGTCAAGCGTCAAGATTATATTCGCACTGCTCGGGCTAAA
GGTCTCGGTGATCGTGTGGTGATTTTGCGCCATATCTTGCGCAATAGCTTGATTCCAGTAATTACGATTCTCGGTCCAGC
AGTGGCGGGCTTGGTAACTGGCTCATTTATTATCGAATCAGTTTTCCGTGTGCCGGGCATTGGCAGTGAATTTATTGGAG
CAATTGGCAGCCGCGATTACTCGATGATTATGGGTTCAACCCTGTTTTTCTCATTGCTGGTGGCTTTAGGCAATATTATG
GTCGATCTTTCGTATGGCTTGATTGATCCGCGGATTCGTAACAGCTAG

Upstream 100 bases:

>100_bases
TAGCTCCCACTCATTAATTCTTTGCAAGCACCCTGTTAAATTGCAATCAAGGCTCGCGAGGCAACACCCCGGCACGCTCT
CGCGCCAATGGAGGCATGGC

Downstream 100 bases:

>100_bases
GAGACCCGAACGTATGGCAACCGCATCGAATGTGGCAGGCAAAAGCCCTGCCCAGGCTCAAGAATTTACGCGGCCTGTTC
GGAGTCTTTGGAGCGATGCT

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KB [H]

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MIGFIIRRVLAMIPVLFLVALITFFMMKQAKGGPFDQEKEVAPSTIALLNRKFGLDKPAWLNSAEFSNRLSTEGNPFLAL
RGLFDSQFGNYLINAVQGDLGPTYASKGTETVQDKIKETFPISLRLGMISLAFALLVGFPLGILGALRQNTIFDYFSLII
STIGFSVPTFVTGLLLLLVMSKVFDVAPIKDPSVWQGFSTSYIPPAIILGLGTMAYITRLTRSSVLEVKRQDYIRTARAK
GLGDRVVILRHILRNSLIPVITILGPAVAGLVTGSFIIESVFRVPGIGSEFIGAIGSRDYSMIMGSTLFFSLLVALGNIM
VDLSYGLIDPRIRNS

Sequences:

>Translated_335_residues
MIGFIIRRVLAMIPVLFLVALITFFMMKQAKGGPFDQEKEVAPSTIALLNRKFGLDKPAWLNSAEFSNRLSTEGNPFLAL
RGLFDSQFGNYLINAVQGDLGPTYASKGTETVQDKIKETFPISLRLGMISLAFALLVGFPLGILGALRQNTIFDYFSLII
STIGFSVPTFVTGLLLLLVMSKVFDVAPIKDPSVWQGFSTSYIPPAIILGLGTMAYITRLTRSSVLEVKRQDYIRTARAK
GLGDRVVILRHILRNSLIPVITILGPAVAGLVTGSFIIESVFRVPGIGSEFIGAIGSRDYSMIMGSTLFFSLLVALGNIM
VDLSYGLIDPRIRNS
>Mature_335_residues
MIGFIIRRVLAMIPVLFLVALITFFMMKQAKGGPFDQEKEVAPSTIALLNRKFGLDKPAWLNSAEFSNRLSTEGNPFLAL
RGLFDSQFGNYLINAVQGDLGPTYASKGTETVQDKIKETFPISLRLGMISLAFALLVGFPLGILGALRQNTIFDYFSLII
STIGFSVPTFVTGLLLLLVMSKVFDVAPIKDPSVWQGFSTSYIPPAIILGLGTMAYITRLTRSSVLEVKRQDYIRTARAK
GLGDRVVILRHILRNSLIPVITILGPAVAGLVTGSFIIESVFRVPGIGSEFIGAIGSRDYSMIMGSTLFFSLLVALGNIM
VDLSYGLIDPRIRNS

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=334, Percent_Identity=35.6287425149701, Blast_Score=216, Evalue=1e-57,
Organism=Escherichia coli, GI1789965, Length=366, Percent_Identity=32.5136612021858, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1787053, Length=335, Percent_Identity=34.3283582089552, Blast_Score=191, Evalue=5e-50,
Organism=Escherichia coli, GI1789888, Length=340, Percent_Identity=30, Blast_Score=154, Evalue=6e-39,
Organism=Escherichia coli, GI1788504, Length=387, Percent_Identity=27.906976744186, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1787550, Length=262, Percent_Identity=29.0076335877863, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1787761, Length=353, Percent_Identity=28.8951841359773, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36582; Mature: 36582

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFIIRRVLAMIPVLFLVALITFFMMKQAKGGPFDQEKEVAPSTIALLNRKFGLDKPAW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHCCCCCCCC
LNSAEFSNRLSTEGNPFLALRGLFDSQFGNYLINAVQGDLGPTYASKGTETVQDKIKETF
CCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHC
PISLRLGMISLAFALLVGFPLGILGALRQNTIFDYFSLIISTIGFSVPTFVTGLLLLLVM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SKVFDVAPIKDPSVWQGFSTSYIPPAIILGLGTMAYITRLTRSSVLEVKRQDYIRTARAK
HHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGDRVVILRHILRNSLIPVITILGPAVAGLVTGSFIIESVFRVPGIGSEFIGAIGSRDY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCH
SMIMGSTLFFSLLVALGNIMVDLSYGLIDPRIRNS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC
>Mature Secondary Structure
MIGFIIRRVLAMIPVLFLVALITFFMMKQAKGGPFDQEKEVAPSTIALLNRKFGLDKPAW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHCCCCCCCC
LNSAEFSNRLSTEGNPFLALRGLFDSQFGNYLINAVQGDLGPTYASKGTETVQDKIKETF
CCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHC
PISLRLGMISLAFALLVGFPLGILGALRQNTIFDYFSLIISTIGFSVPTFVTGLLLLLVM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SKVFDVAPIKDPSVWQGFSTSYIPPAIILGLGTMAYITRLTRSSVLEVKRQDYIRTARAK
HHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGDRVVILRHILRNSLIPVITILGPAVAGLVTGSFIIESVFRVPGIGSEFIGAIGSRDY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCH
SMIMGSTLFFSLLVALGNIMVDLSYGLIDPRIRNS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]