| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897402
Identifier: 159897402
GI number: 159897402
Start: 994531
End: 995148
Strand: Direct
Name: 159897402
Synonym: Haur_0873
Alternate gene names: NA
Gene position: 994531-995148 (Clockwise)
Preceding gene: 159897401
Following gene: 159897403
Centisome position: 15.67
GC content: 46.93
Gene sequence:
>618_bases ATGATGAAGCCACTCGAACTCATTCAGGCCATTCGAATGATTAAACGCCAAGCCCTTGCGCAATCGACCCAACTTGCCCA ACTAAGGCAAGCTTTGATTGCCTTTGTCTCGGAGCCAGCCAATCGCCAAGTTAATCTTACGAATACTAGTTGTGGATTGT ATACGCGGATCTTGCTTAATTCCTTTGATGATGATTTTCAAATTGTGGTTGTGTTGTGGGGACCCCAAAGTGCCAGCCCA ATTCATGATCATAATGGAACTGTTGGGGCGGTTGCTGCCTTAGCTGGACATACCATCGAAGCAAAATATCAGATTCTCCG CACCGAAGCTCAGCGTGCATGGCTCCAAAAGCAAGAAACAAGCGTATTAGAGGCCACCTATGTAACCCCGATCTTACCTG ATGAAACGAGCCAACTCCACGATATGGTCAACGCAACTGATACCTGGGCAGCAACAGTTCATATTTATCTTACGCCGATC ACCGATTTTTATATTTACGAGCCCCAGCCTGATGGAACATATATCATGGTCGAGCGCAAACTCTGGTTCGATGGTGATAA TGCTTGGCAAACTTGGCAGACTCCACTTCAGCAAGAAGTCTTGGGATCAGGCTCCTAG
Upstream 100 bases:
>100_bases TTGGCAAATTCACAAACCCAATGGCTAGCGTTAATCCATGCGTGGGTTGATGCAGGCCTCAGGGTGCTGAACGTTGGTGG CTCTAAACAAAAGGAGTTGC
Downstream 100 bases:
>100_bases CGAAGGAACTATAGCGTATGACGTATGGCCCACCAGCGCACACAAGTTTTGATCATTCAAGCATTACGCATCAACAACAG GCCGTTCGGCAGGTCGTTGA
Product: cysteine dioxygenase type I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MMKPLELIQAIRMIKRQALAQSTQLAQLRQALIAFVSEPANRQVNLTNTSCGLYTRILLNSFDDDFQIVVVLWGPQSASP IHDHNGTVGAVAALAGHTIEAKYQILRTEAQRAWLQKQETSVLEATYVTPILPDETSQLHDMVNATDTWAATVHIYLTPI TDFYIYEPQPDGTYIMVERKLWFDGDNAWQTWQTPLQQEVLGSGS
Sequences:
>Translated_205_residues MMKPLELIQAIRMIKRQALAQSTQLAQLRQALIAFVSEPANRQVNLTNTSCGLYTRILLNSFDDDFQIVVVLWGPQSASP IHDHNGTVGAVAALAGHTIEAKYQILRTEAQRAWLQKQETSVLEATYVTPILPDETSQLHDMVNATDTWAATVHIYLTPI TDFYIYEPQPDGTYIMVERKLWFDGDNAWQTWQTPLQQEVLGSGS >Mature_205_residues MMKPLELIQAIRMIKRQALAQSTQLAQLRQALIAFVSEPANRQVNLTNTSCGLYTRILLNSFDDDFQIVVVLWGPQSASP IHDHNGTVGAVAALAGHTIEAKYQILRTEAQRAWLQKQETSVLEATYVTPILPDETSQLHDMVNATDTWAATVHIYLTPI TDFYIYEPQPDGTYIMVERKLWFDGDNAWQTWQTPLQQEVLGSGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23086; Mature: 23086
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKPLELIQAIRMIKRQALAQSTQLAQLRQALIAFVSEPANRQVNLTNTSCGLYTRILLN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH SFDDDFQIVVVLWGPQSASPIHDHNGTVGAVAALAGHTIEAKYQILRTEAQRAWLQKQET CCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH SVLEATYVTPILPDETSQLHDMVNATDTWAATVHIYLTPITDFYIYEPQPDGTYIMVERK HHHHHHEECCCCCCCHHHHHHHHCCCCCEEEEEEEEEEECCEEEEECCCCCCCEEEEEEE LWFDGDNAWQTWQTPLQQEVLGSGS EEECCCCCCHHHCCHHHHHHHCCCC >Mature Secondary Structure MMKPLELIQAIRMIKRQALAQSTQLAQLRQALIAFVSEPANRQVNLTNTSCGLYTRILLN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH SFDDDFQIVVVLWGPQSASPIHDHNGTVGAVAALAGHTIEAKYQILRTEAQRAWLQKQET CCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH SVLEATYVTPILPDETSQLHDMVNATDTWAATVHIYLTPITDFYIYEPQPDGTYIMVERK HHHHHHEECCCCCCCHHHHHHHHCCCCCEEEEEEEEEEECCEEEEECCCCCCCEEEEEEE LWFDGDNAWQTWQTPLQQEVLGSGS EEECCCCCCHHHCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA