| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897356
Identifier: 159897356
GI number: 159897356
Start: 935902
End: 937839
Strand: Direct
Name: 159897356
Synonym: Haur_0827
Alternate gene names: NA
Gene position: 935902-937839 (Clockwise)
Preceding gene: 159897355
Following gene: 159897357
Centisome position: 14.75
GC content: 54.28
Gene sequence:
>1938_bases ATGGCTGGTGCTGAGATTGTCAGCGTCGCAATTTATCCTCCGGTTGGCTTTGCCCGCGTCGGAAATAGCCCAAATGAATT TTTTTATGGCCCCGAAGTGCTGGGTGCGCCCCAAGTTGACCCCGATTTGTTTCGCGATCCTAGTGGCGCGATCAAACGCC AAGCGGCGCGGTTTCGAGTTTATGGCTTGAATGCCGCTGGTGAGGTGATTTGCGAGTTAAACCAAACCAATCCTGATCTG CAAGAAATTGTCTGGACAGCGCAGCTCGCCAATCAAAAAGCCGCGTGGTATGAATTTATCCAAGCGCTGGATATTCCGGC CTCTGCTGATGGCAAAATTGTTAGCAAGCGCCGCAATGCCGATGTAACCGAGCGCGATCAATTGACGATCGATGGTGGCA CACGCAGCATTTGTGGTTTGAATGTTAACCCTCAGGGCCAAGAGGCGATCTATGCCTTTGATCAGGGCACATTCTTTGGT AAGCACGTTTATTTGGGCGAATTGCGCACCGACGAACAGGGCAATTTGATTGTGCTGGGCGGGCGTGGTCACTCAGCTTC GGCCCATGGCAAGCCCTTAACCACCTTTGCCGATAACGATGATTGGCATGATGATACTGCCGATGGCCCGATTGAGGCCG TGGTCAAATTGAGTGATGGACGTGTTTTGCAGGCGACTCATGCGTGGGTGATTGTTGCGCCGCCTGATTATGCGCCAGGC ACAAATTCGATTATGACAGGCTACGATTTGCTGTTTGAAGTGGCGATGCAGCTTGATCCGACGCTTGCGCCAGCTAAGCC CCGTTTTAGCAGCGAAATTTACCCGTTGCTCTCACGTTTTAGCCAATTGCAATGGGTTAATGCTGGCTTTGCGCGGAGTT TTGGTTGGGGCAGCCCCAGCGATTTCAATAATCCTGAGTTGATCGCTCGTTTGGGCGATCCTAGTGCTGCGAGCGAACCA TTGCGCCAAGCGGTTTTGGCTCAAATGCGCAATCCCAGCAATCCCTATATCGATCCCGAAGGCTTGCCATTGTTTTATGG CGATGCGATTACGCTCAACACCAAAACCACCGATCCCCAAGAGTGGCAAGCAATTTTGCCCAGCCAATATCGTTGGCTAG AGCAATGGGCCAATGGCGATTTTATTGCCGATGGTTTGCCCGTGGTCAGGCCGTGGGCGCAGCTTGATCCTGCTGAACAG GCCTACAACCTAACGCGGGCGGCGCTTGATGCAACCTTGGGCGGGCCGTTTCACCCGGGCTGCGAATTCACTTGGCCGCT ACGCCATACCTCGATGTATGCAGCACCATTTCGGCTCAAACGTCGTACTAGCCCTGAGCCAGATTGGGGCGATACGCTCG ATGCGGCTACCGCCTTAGCACCCGATGGGATGTTGTATGCCAGCGATGCGGGCGCGATCACCCGTTGGATGGCCGTGCCT TGGCAAACCGATACCTCAAGCTGTCTCTCGGCCTATATGGGCTATGCCGGAACCTATCTGCCAACTTTTTGGCCCGCTCG TGTGCCCAACGATGTGCTTAGCCAAGAGAGCTACCAGATTATTATGAACCCTGATGCTACGCCTGAAGAGCGTGCCCAAG CCTTCGCGCCGACGGCCCGCCGCAAGTGGCTGCGCGGCATGGTCTACACCGAGAGCATTCCACCAGGCCACATTCCAACC GTGCCAGCAATTACTAAATTTACCAACGAATGGGATACCGTGGGCATTATCATCGCCCAAACTGGGCCTGAACATAGCGC TAGCTTCCCGCAAACGCTTTGGGTTGAAACAGGCCGACACGTTGAATCCGAGGCTCCCCAATTAACCCGTAGCCTAGCCG CCGAGCCAGAAACTGATCTAGTTGATAGCGACCTCAATTGGCCGCAACAACGCCTCAAGCGAGGACGCAAAAATGCCGCC GAAGCCAATAACGATTGA
Upstream 100 bases:
>100_bases TGAAAGAAGATTGCTAGGGGTGGGGAAACAATGGTGTTTGTTACTGCAATAAACCAGTACATCTAAATATTAATTAAAAG GTTTACAAGGAGATATGATT
Downstream 100 bases:
>100_bases TTGTTTGATCGTTGGCGGCGGAATTGCTGGCTGCGCCTGTGCCGTGCATCTCGCACGGCATGGGTGGCAGGTGCTTGTGC TCGAACGCCCGCCTGTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 645; Mature: 644
Protein sequence:
>645_residues MAGAEIVSVAIYPPVGFARVGNSPNEFFYGPEVLGAPQVDPDLFRDPSGAIKRQAARFRVYGLNAAGEVICELNQTNPDL QEIVWTAQLANQKAAWYEFIQALDIPASADGKIVSKRRNADVTERDQLTIDGGTRSICGLNVNPQGQEAIYAFDQGTFFG KHVYLGELRTDEQGNLIVLGGRGHSASAHGKPLTTFADNDDWHDDTADGPIEAVVKLSDGRVLQATHAWVIVAPPDYAPG TNSIMTGYDLLFEVAMQLDPTLAPAKPRFSSEIYPLLSRFSQLQWVNAGFARSFGWGSPSDFNNPELIARLGDPSAASEP LRQAVLAQMRNPSNPYIDPEGLPLFYGDAITLNTKTTDPQEWQAILPSQYRWLEQWANGDFIADGLPVVRPWAQLDPAEQ AYNLTRAALDATLGGPFHPGCEFTWPLRHTSMYAAPFRLKRRTSPEPDWGDTLDAATALAPDGMLYASDAGAITRWMAVP WQTDTSSCLSAYMGYAGTYLPTFWPARVPNDVLSQESYQIIMNPDATPEERAQAFAPTARRKWLRGMVYTESIPPGHIPT VPAITKFTNEWDTVGIIIAQTGPEHSASFPQTLWVETGRHVESEAPQLTRSLAAEPETDLVDSDLNWPQQRLKRGRKNAA EANND
Sequences:
>Translated_645_residues MAGAEIVSVAIYPPVGFARVGNSPNEFFYGPEVLGAPQVDPDLFRDPSGAIKRQAARFRVYGLNAAGEVICELNQTNPDL QEIVWTAQLANQKAAWYEFIQALDIPASADGKIVSKRRNADVTERDQLTIDGGTRSICGLNVNPQGQEAIYAFDQGTFFG KHVYLGELRTDEQGNLIVLGGRGHSASAHGKPLTTFADNDDWHDDTADGPIEAVVKLSDGRVLQATHAWVIVAPPDYAPG TNSIMTGYDLLFEVAMQLDPTLAPAKPRFSSEIYPLLSRFSQLQWVNAGFARSFGWGSPSDFNNPELIARLGDPSAASEP LRQAVLAQMRNPSNPYIDPEGLPLFYGDAITLNTKTTDPQEWQAILPSQYRWLEQWANGDFIADGLPVVRPWAQLDPAEQ AYNLTRAALDATLGGPFHPGCEFTWPLRHTSMYAAPFRLKRRTSPEPDWGDTLDAATALAPDGMLYASDAGAITRWMAVP WQTDTSSCLSAYMGYAGTYLPTFWPARVPNDVLSQESYQIIMNPDATPEERAQAFAPTARRKWLRGMVYTESIPPGHIPT VPAITKFTNEWDTVGIIIAQTGPEHSASFPQTLWVETGRHVESEAPQLTRSLAAEPETDLVDSDLNWPQQRLKRGRKNAA EANND >Mature_644_residues AGAEIVSVAIYPPVGFARVGNSPNEFFYGPEVLGAPQVDPDLFRDPSGAIKRQAARFRVYGLNAAGEVICELNQTNPDLQ EIVWTAQLANQKAAWYEFIQALDIPASADGKIVSKRRNADVTERDQLTIDGGTRSICGLNVNPQGQEAIYAFDQGTFFGK HVYLGELRTDEQGNLIVLGGRGHSASAHGKPLTTFADNDDWHDDTADGPIEAVVKLSDGRVLQATHAWVIVAPPDYAPGT NSIMTGYDLLFEVAMQLDPTLAPAKPRFSSEIYPLLSRFSQLQWVNAGFARSFGWGSPSDFNNPELIARLGDPSAASEPL RQAVLAQMRNPSNPYIDPEGLPLFYGDAITLNTKTTDPQEWQAILPSQYRWLEQWANGDFIADGLPVVRPWAQLDPAEQA YNLTRAALDATLGGPFHPGCEFTWPLRHTSMYAAPFRLKRRTSPEPDWGDTLDAATALAPDGMLYASDAGAITRWMAVPW QTDTSSCLSAYMGYAGTYLPTFWPARVPNDVLSQESYQIIMNPDATPEERAQAFAPTARRKWLRGMVYTESIPPGHIPTV PAITKFTNEWDTVGIIIAQTGPEHSASFPQTLWVETGRHVESEAPQLTRSLAAEPETDLVDSDLNWPQQRLKRGRKNAAE ANND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70930; Mature: 70799
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAEIVSVAIYPPVGFARVGNSPNEFFYGPEVLGAPQVDPDLFRDPSGAIKRQAARFRV CCCCEEEEEEEECCCCHHHCCCCCCCCEECCCCCCCCCCCHHHHCCCCHHHHHHHHEEEE YGLNAAGEVICELNQTNPDLQEIVWTAQLANQKAAWYEFIQALDIPASADGKIVSKRRNA EEECCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEHHCCCC DVTERDQLTIDGGTRSICGLNVNPQGQEAIYAFDQGTFFGKHVYLGELRTDEQGNLIVLG CCCCCCEEEECCCCCEEEECCCCCCCCCEEEEEECCCEEECEEEEECCCCCCCCCEEEEE GRGHSASAHGKPLTTFADNDDWHDDTADGPIEAVVKLSDGRVLQATHAWVIVAPPDYAPG CCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEECEEEEEECCCCCCC TNSIMTGYDLLFEVAMQLDPTLAPAKPRFSSEIYPLLSRFSQLQWVNAGFARSFGWGSPS CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC DFNNPELIARLGDPSAASEPLRQAVLAQMRNPSNPYIDPEGLPLFYGDAITLNTKTTDPQ CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEECCCCCHH EWQAILPSQYRWLEQWANGDFIADGLPVVRPWAQLDPAEQAYNLTRAALDATLGGPFHPG HHHHHCCHHHHHHHHHCCCCEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCC CEFTWPLRHTSMYAAPFRLKRRTSPEPDWGDTLDAATALAPDGMLYASDAGAITRWMAVP CCEEECCCCCEEEECCHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCEEHEEECC WQTDTSSCLSAYMGYAGTYLPTFWPARVPNDVLSQESYQIIMNPDATPEERAQAFAPTAR CCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHHCCHHH RKWLRGMVYTESIPPGHIPTVPAITKFTNEWDTVGIIIAQTGPEHSASFPQTLWVETGRH HHHHHCCEEECCCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCC VESEAPQLTRSLAAEPETDLVDSDLNWPQQRLKRGRKNAAEANND CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AGAEIVSVAIYPPVGFARVGNSPNEFFYGPEVLGAPQVDPDLFRDPSGAIKRQAARFRV CCCEEEEEEEECCCCHHHCCCCCCCCEECCCCCCCCCCCHHHHCCCCHHHHHHHHEEEE YGLNAAGEVICELNQTNPDLQEIVWTAQLANQKAAWYEFIQALDIPASADGKIVSKRRNA EEECCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEHHCCCC DVTERDQLTIDGGTRSICGLNVNPQGQEAIYAFDQGTFFGKHVYLGELRTDEQGNLIVLG CCCCCCEEEECCCCCEEEECCCCCCCCCEEEEEECCCEEECEEEEECCCCCCCCCEEEEE GRGHSASAHGKPLTTFADNDDWHDDTADGPIEAVVKLSDGRVLQATHAWVIVAPPDYAPG CCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEECEEEEEECCCCCCC TNSIMTGYDLLFEVAMQLDPTLAPAKPRFSSEIYPLLSRFSQLQWVNAGFARSFGWGSPS CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC DFNNPELIARLGDPSAASEPLRQAVLAQMRNPSNPYIDPEGLPLFYGDAITLNTKTTDPQ CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEECCCCCHH EWQAILPSQYRWLEQWANGDFIADGLPVVRPWAQLDPAEQAYNLTRAALDATLGGPFHPG HHHHHCCHHHHHHHHHCCCCEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCC CEFTWPLRHTSMYAAPFRLKRRTSPEPDWGDTLDAATALAPDGMLYASDAGAITRWMAVP CCEEECCCCCEEEECCHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCEEHEEECC WQTDTSSCLSAYMGYAGTYLPTFWPARVPNDVLSQESYQIIMNPDATPEERAQAFAPTAR CCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHHCCHHH RKWLRGMVYTESIPPGHIPTVPAITKFTNEWDTVGIIIAQTGPEHSASFPQTLWVETGRH HHHHHCCEEECCCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCC VESEAPQLTRSLAAEPETDLVDSDLNWPQQRLKRGRKNAAEANND CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA