| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897355
Identifier: 159897355
GI number: 159897355
Start: 934621
End: 935634
Strand: Direct
Name: 159897355
Synonym: Haur_0826
Alternate gene names: NA
Gene position: 934621-935634 (Clockwise)
Preceding gene: 159897354
Following gene: 159897356
Centisome position: 14.73
GC content: 52.96
Gene sequence:
>1014_bases ATGAGTTCAGATCATGCTCACGATTGTCCATGTGCTGATCCTATCACCCAATTACGCCAGCTCTTTGTCAACAAAACTAT GGGCACGCGGATTAACGCCGGACAAGATCCGGTTCGACGGGCGGTGTTTCTTAAGCCGCACGGTGGGGCCAAAGCCACGT GGTGGGTTCGCCCCCATTTGCCAGCTGAGCTACGGGTTGGCTTGTTGGCCTACGATCAGCTGGCGGCTTGGCTGCGCTTT TCCAGCGATACCGTGCCGTTTGCCAGCGACCTTGGCACAACCTTGGGGGTAGGTATCAAGCTGTTTGGCGTACATGGTCG TAAGTTATTAACTGGTGAAGAAGCTGCATTAACTCACGATTTGGTCTTGCAAAATTATCCAGTCTTTTTTGTCGATACCG CCAAGGATATGTGCGAATTTACCTACGAAGGCTTGGTGGGTGATGGCTATGATGCATATCTCGCCAAACACCCCAAAACC CGCAAAATTCTCGATCTCATGCAGCAAAATCTGGCTAGTGTCTTCGATGCAGTCTATTGGAGCGGCTTGCCCTATGCATT TGGCCAAGGCCGTTACGTCAAATATCGCTTAGCGCTTGAAGCACTCAATCCACAGCCACCCGGCAACCCACAGCTCAACC CCAACTTTTTGCACGATGATCTGCGTAGTCGCTTGTTGGCCGGCCCAATTGATTTGCACTTTAGCATTCAACTGCGCACC AACCCTAAACTGATGCCGTTGGATGCAGCAACCGTCGAATGGTCAAGCGAGCTAGCGCCGCCGCTGCATGTGGCAACCCT AACTCTGCCCCAACAAGATATTGATGCACCTGGCCAAGCCGCCTACGTCGAAAATCTGGCCTTCAATCCTTGGCACGCGC TGCCCGAACACGCTCCAGTTGGCAGCATCAGTGAAGCTCGCAAAGTGGTCTATCAAGCTTCGGCGGAGTTGCGTCGCCAA CGCAATGGCATTCCGATTGTGGAGCCACGTCAACCTCGTCACGATTTAACCTAG
Upstream 100 bases:
>100_bases AATAGTCTAATTAACCAGCCCTTCCTACGTTAATTAACTAAGCAGCCAATTGCTAGGCGATTGGCTGCCCTCATCGATCA CGCTGCACTGAGGAGCTTGT
Downstream 100 bases:
>100_bases CGCATAAGGGGTTTCTGCTGCAAACCATGGAATCCATGGTTTATCGGTGGATGGTTGCCCACCATTTCATGAACTTTAGG GGGTGCAGGGGGATTAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSSDHAHDCPCADPITQLRQLFVNKTMGTRINAGQDPVRRAVFLKPHGGAKATWWVRPHLPAELRVGLLAYDQLAAWLRF SSDTVPFASDLGTTLGVGIKLFGVHGRKLLTGEEAALTHDLVLQNYPVFFVDTAKDMCEFTYEGLVGDGYDAYLAKHPKT RKILDLMQQNLASVFDAVYWSGLPYAFGQGRYVKYRLALEALNPQPPGNPQLNPNFLHDDLRSRLLAGPIDLHFSIQLRT NPKLMPLDAATVEWSSELAPPLHVATLTLPQQDIDAPGQAAYVENLAFNPWHALPEHAPVGSISEARKVVYQASAELRRQ RNGIPIVEPRQPRHDLT
Sequences:
>Translated_337_residues MSSDHAHDCPCADPITQLRQLFVNKTMGTRINAGQDPVRRAVFLKPHGGAKATWWVRPHLPAELRVGLLAYDQLAAWLRF SSDTVPFASDLGTTLGVGIKLFGVHGRKLLTGEEAALTHDLVLQNYPVFFVDTAKDMCEFTYEGLVGDGYDAYLAKHPKT RKILDLMQQNLASVFDAVYWSGLPYAFGQGRYVKYRLALEALNPQPPGNPQLNPNFLHDDLRSRLLAGPIDLHFSIQLRT NPKLMPLDAATVEWSSELAPPLHVATLTLPQQDIDAPGQAAYVENLAFNPWHALPEHAPVGSISEARKVVYQASAELRRQ RNGIPIVEPRQPRHDLT >Mature_336_residues SSDHAHDCPCADPITQLRQLFVNKTMGTRINAGQDPVRRAVFLKPHGGAKATWWVRPHLPAELRVGLLAYDQLAAWLRFS SDTVPFASDLGTTLGVGIKLFGVHGRKLLTGEEAALTHDLVLQNYPVFFVDTAKDMCEFTYEGLVGDGYDAYLAKHPKTR KILDLMQQNLASVFDAVYWSGLPYAFGQGRYVKYRLALEALNPQPPGNPQLNPNFLHDDLRSRLLAGPIDLHFSIQLRTN PKLMPLDAATVEWSSELAPPLHVATLTLPQQDIDAPGQAAYVENLAFNPWHALPEHAPVGSISEARKVVYQASAELRRQR NGIPIVEPRQPRHDLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020835 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase [H]
EC number: NA
Molecular weight: Translated: 37475; Mature: 37344
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDHAHDCPCADPITQLRQLFVNKTMGTRINAGQDPVRRAVFLKPHGGAKATWWVRPHL CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCC PAELRVGLLAYDQLAAWLRFSSDTVPFASDLGTTLGVGIKLFGVHGRKLLTGEEAALTHD CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHCCCEEEEEECCCEEECCCHHHHHHH LVLQNYPVFFVDTAKDMCEFTYEGLVGDGYDAYLAKHPKTRKILDLMQQNLASVFDAVYW HHHHCCCEEEEECHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH SGLPYAFGQGRYVKYRLALEALNPQPPGNPQLNPNFLHDDLRSRLLAGPIDLHFSIQLRT CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECC NPKLMPLDAATVEWSSELAPPLHVATLTLPQQDIDAPGQAAYVENLAFNPWHALPEHAPV CCCEEECCCCCCCCHHHCCCCEEEEEEECCHHHCCCCCCHHHHHHCCCCCCCCCCCCCCC GSISEARKVVYQASAELRRQRNGIPIVEPRQPRHDLT CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SSDHAHDCPCADPITQLRQLFVNKTMGTRINAGQDPVRRAVFLKPHGGAKATWWVRPHL CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCC PAELRVGLLAYDQLAAWLRFSSDTVPFASDLGTTLGVGIKLFGVHGRKLLTGEEAALTHD CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHCCCEEEEEECCCEEECCCHHHHHHH LVLQNYPVFFVDTAKDMCEFTYEGLVGDGYDAYLAKHPKTRKILDLMQQNLASVFDAVYW HHHHCCCEEEEECHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH SGLPYAFGQGRYVKYRLALEALNPQPPGNPQLNPNFLHDDLRSRLLAGPIDLHFSIQLRT CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECC NPKLMPLDAATVEWSSELAPPLHVATLTLPQQDIDAPGQAAYVENLAFNPWHALPEHAPV CCCEEECCCCCCCCHHHCCCCEEEEEEECCHHHCCCCCCHHHHHHCCCCCCCCCCCCCCC GSISEARKVVYQASAELRRQRNGIPIVEPRQPRHDLT CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]