| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is ppc [H]
Identifier: 159897337
GI number: 159897337
Start: 912985
End: 915711
Strand: Direct
Name: ppc [H]
Synonym: Haur_0808
Alternate gene names: 159897337
Gene position: 912985-915711 (Clockwise)
Preceding gene: 159897328
Following gene: 159897339
Centisome position: 14.39
GC content: 52.7
Gene sequence:
>2727_bases ATGGCCAATTTGCCAAGCTACGATTTTGCCGATTTAATCAAAGCTGACCATGATGCTGAATTTGTTTTGACATGTTTCGC TGAAGTATTACAAGAATTAGGCGAGGCTGAACTCGCTGCCTATCTTGGGTTGCCCACAACCGCCTCAATTAACCAAACAA TTACGCCTGAACGAGCGATTCAAGCGGCATCGCTCAGCTTTCAATTGCTGAATATGGTCGAGGAAAATGCCGCTGCCCAA CAACGCCGCATCCGCGAAGCTGCCGAAGGCTTTAATGCTGAAGTTGGGCTTTGGGGCAATACCTTGCAAAGCCTGAGCCA AGCTGGCTTCAGCGCCGAGCAGATTGGCGCTGCCTTAGGCCAGATTTATGTTGAACCAGTCCTGACCGCCCACCCCACCG AGGCCAAACGGGCGACCATGCTTGAGCATTATCGACGTTTATATTTGCTGTTGGTCAAGCGCGAAAACCCCATTTGGACT CCGCTGGAGCAACAGGCGCTGCGCGATGAGATTAAAGTTGAGCTTGAGCGGCTTTGGCGCACTGGTGAGATTTTCCTTGA AAAGCCGAGCGTCGCCGATGAATTGCGCAATATTTTGCATTATTTGCGTCATGTGTTTCCCGCCAGTTTGGTAACGCTCG ATTTGCGTTTGCAACAGGCTTGGCAATTGCAAGGCTTTGATCGGCGGTTGTTACCAACAACCGAGCAATTACCGCATGTG CAGTTTGGTACATGGGTTGGCGGCGATCGCGATGGACATCCCTTGGTTACGGCGGCGGTCACGCGCTTTGCTTTGCAGGA GTTGCGCCGCAATGCGCTTGAGGTTTTGCACGAACAATTAGTTCAACTAGTGATCAAATTAAGCTTATCTGATCGCTTGC AACCACCGCACGCCGCCTTGCTTGAAGCCCTCGATGCTAGTGCGGCTGCGTTGGGCCAACGGGGGCAAATGGCCTTGGCA CGGAATCCCGAGGAGCCATGGCGACAATGGATCAACTTAATCATAGCGCGATTGCCCGAATCAGGCCAACTACGCCAGCC TTGGCAGTATCGCAGTAGCAGCGAAACTGTGGCTGACCTGCAATTTTTGGCCGAGCAACTGCATGCTGTTGGCGCACAAC GGCTTGTTTTGAATGATCTTCAGCCTGTGATTCGCAGTGTGCAAACTTTGGGCTTTCACAGCGCCGTGCTCGATATTCGC CAAAACAGCAAATTCCACGATTTGGCGGTAGAACAATTGCTGCAAGCTGCTGGATTCAGCGATTATCAATTTAGTAGTTG GCCCGAGGAACAACGGCTCGAATTGCTCAATCGCGAGTTGCAAAGTGCCCGCCCATTTGCCCACCCTAGCCTTGAGTTGG GCAACGAAGCGAGCGCTGTGCGCGATTGCTATCGTGTGTTGGCCGATGAAATTGCCCAGCATGGCACGGCAGGCCTTGGC TCGTTGATTATCAGCATGACCCGCAGCCTCTCGGATTTGCTGGTGGTGTATTTGTTGGCACGTGAAGCTAGCTTGTTATA CGTTACTGAGGCTGGTTTGGCGTGTGTGCTGCCAGTTGTGCCATTATTCGAAACGATCGAAGATTTGGAAATTAGCCCTG GTATTCTCGATGCGTTTTTGGCGCATCCGGTCAGCCAAGCGAGCCGAGCGTTGCGCCAAACTAGCGTGCAACAGGTGATG GTTGGCTATAGCGATAGCAACAAAGATGGCGGCATTTTGGCCAGTTTGTGGAGCTTGTATCGGTCGCAAGGCACGCTAGC AGCGGTCGGAGCCAAGCATCATGTGCGAGTACGTTTCTTCCACGGTCGTGGCGGCACAATCAGCCGTGGCGCTGGTCCAA CCCACCGTTTCTTGAACGCGCTACCAGCAGCGGCCTTGGCAGGCGATTTGCGCATGACCGAGCAAGGCGAAACCATCGCC CAAAAATATGCCAACCATATCACGGCGGTCTATAATTTAGAATTAATGGTGGCGGGCGTAACCGAAGCCACTTTGCTTGG CTCGCAGCGTGATCAAACGCCCCACAGCCTTGCCCCAATCATGGATGTACTGACTGCCTACAGCCGCCAACGCTACGAAA CCTTGATTCAAACACCTGGTTTTATTCAGTTTTTTGGTCAAGCCACGCCGATTGATGTGATTGAGCAAGGCAAAATCGGC TCACGCCCTGCCCGCCGCACTGGCCAACGCACCCTTGGCGATTTGCGGGCAATTCCATGGGTATTTAGCTGGAGCCAAGC CCGCTTTTTTCTTTCTGGTTGGTATGGGGTTGGCAGCAGCTTGGCATGGCTCGCCGAGCAACATCCTGAACAGTTTGACC AACTCAAACAAGCGGCCTTTGAATGGTATCCGTTGAAATATTTATTAACCAATGTCAGCACCAGCATGCTCTCGGCTGAT CTGGCAACCATGCAAGCCTATAGCCAGTTGGTCGAAGATCCAAGCGTGCGCCAGCCGATTATGGCGGCCATTGAGGCTGA GTTTAAGCAAACCCAACAGCAACTAGAGCTGATTTTTGGCGGGAGTTTGGCCGAACGTCGCCCACGGATTTATCGTATGT TGCAAGGTCGTCAGTCACGATTAAGCCAATTGCATCAGCAACAAATCAATTTGCTGCATACATGGCGCAGCCTGCCCAGC GAGCAAATTCCAGAGCGTGAGCGATTGCTAACCCAGTTGTTGCTCACGGTCAATGCGATTGCTAGCGGCCTACGCACGAC TGGCTAA
Upstream 100 bases:
>100_bases TATAGTTCTTTTGGGCTAGCCACAGTGGCGATCTTTGCTATACTTGGCGTGCAGCGTTGCACCACGAGAGCGAAGATTCC TGTAGTTCGAGGTATTTGCC
Downstream 100 bases:
>100_bases AAATCATGGTTCGTAAAATTCCCTCACCCCCTTACAAGGGTAGGTTGTTACCAATCCATTGATCACCACCCTTCCGTCCC GCCTCAAGGCGGGAAACGCA
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 908; Mature: 907
Protein sequence:
>908_residues MANLPSYDFADLIKADHDAEFVLTCFAEVLQELGEAELAAYLGLPTTASINQTITPERAIQAASLSFQLLNMVEENAAAQ QRRIREAAEGFNAEVGLWGNTLQSLSQAGFSAEQIGAALGQIYVEPVLTAHPTEAKRATMLEHYRRLYLLLVKRENPIWT PLEQQALRDEIKVELERLWRTGEIFLEKPSVADELRNILHYLRHVFPASLVTLDLRLQQAWQLQGFDRRLLPTTEQLPHV QFGTWVGGDRDGHPLVTAAVTRFALQELRRNALEVLHEQLVQLVIKLSLSDRLQPPHAALLEALDASAAALGQRGQMALA RNPEEPWRQWINLIIARLPESGQLRQPWQYRSSSETVADLQFLAEQLHAVGAQRLVLNDLQPVIRSVQTLGFHSAVLDIR QNSKFHDLAVEQLLQAAGFSDYQFSSWPEEQRLELLNRELQSARPFAHPSLELGNEASAVRDCYRVLADEIAQHGTAGLG SLIISMTRSLSDLLVVYLLAREASLLYVTEAGLACVLPVVPLFETIEDLEISPGILDAFLAHPVSQASRALRQTSVQQVM VGYSDSNKDGGILASLWSLYRSQGTLAAVGAKHHVRVRFFHGRGGTISRGAGPTHRFLNALPAAALAGDLRMTEQGETIA QKYANHITAVYNLELMVAGVTEATLLGSQRDQTPHSLAPIMDVLTAYSRQRYETLIQTPGFIQFFGQATPIDVIEQGKIG SRPARRTGQRTLGDLRAIPWVFSWSQARFFLSGWYGVGSSLAWLAEQHPEQFDQLKQAAFEWYPLKYLLTNVSTSMLSAD LATMQAYSQLVEDPSVRQPIMAAIEAEFKQTQQQLELIFGGSLAERRPRIYRMLQGRQSRLSQLHQQQINLLHTWRSLPS EQIPERERLLTQLLLTVNAIASGLRTTG
Sequences:
>Translated_908_residues MANLPSYDFADLIKADHDAEFVLTCFAEVLQELGEAELAAYLGLPTTASINQTITPERAIQAASLSFQLLNMVEENAAAQ QRRIREAAEGFNAEVGLWGNTLQSLSQAGFSAEQIGAALGQIYVEPVLTAHPTEAKRATMLEHYRRLYLLLVKRENPIWT PLEQQALRDEIKVELERLWRTGEIFLEKPSVADELRNILHYLRHVFPASLVTLDLRLQQAWQLQGFDRRLLPTTEQLPHV QFGTWVGGDRDGHPLVTAAVTRFALQELRRNALEVLHEQLVQLVIKLSLSDRLQPPHAALLEALDASAAALGQRGQMALA RNPEEPWRQWINLIIARLPESGQLRQPWQYRSSSETVADLQFLAEQLHAVGAQRLVLNDLQPVIRSVQTLGFHSAVLDIR QNSKFHDLAVEQLLQAAGFSDYQFSSWPEEQRLELLNRELQSARPFAHPSLELGNEASAVRDCYRVLADEIAQHGTAGLG SLIISMTRSLSDLLVVYLLAREASLLYVTEAGLACVLPVVPLFETIEDLEISPGILDAFLAHPVSQASRALRQTSVQQVM VGYSDSNKDGGILASLWSLYRSQGTLAAVGAKHHVRVRFFHGRGGTISRGAGPTHRFLNALPAAALAGDLRMTEQGETIA QKYANHITAVYNLELMVAGVTEATLLGSQRDQTPHSLAPIMDVLTAYSRQRYETLIQTPGFIQFFGQATPIDVIEQGKIG SRPARRTGQRTLGDLRAIPWVFSWSQARFFLSGWYGVGSSLAWLAEQHPEQFDQLKQAAFEWYPLKYLLTNVSTSMLSAD LATMQAYSQLVEDPSVRQPIMAAIEAEFKQTQQQLELIFGGSLAERRPRIYRMLQGRQSRLSQLHQQQINLLHTWRSLPS EQIPERERLLTQLLLTVNAIASGLRTTG >Mature_907_residues ANLPSYDFADLIKADHDAEFVLTCFAEVLQELGEAELAAYLGLPTTASINQTITPERAIQAASLSFQLLNMVEENAAAQQ RRIREAAEGFNAEVGLWGNTLQSLSQAGFSAEQIGAALGQIYVEPVLTAHPTEAKRATMLEHYRRLYLLLVKRENPIWTP LEQQALRDEIKVELERLWRTGEIFLEKPSVADELRNILHYLRHVFPASLVTLDLRLQQAWQLQGFDRRLLPTTEQLPHVQ FGTWVGGDRDGHPLVTAAVTRFALQELRRNALEVLHEQLVQLVIKLSLSDRLQPPHAALLEALDASAAALGQRGQMALAR NPEEPWRQWINLIIARLPESGQLRQPWQYRSSSETVADLQFLAEQLHAVGAQRLVLNDLQPVIRSVQTLGFHSAVLDIRQ NSKFHDLAVEQLLQAAGFSDYQFSSWPEEQRLELLNRELQSARPFAHPSLELGNEASAVRDCYRVLADEIAQHGTAGLGS LIISMTRSLSDLLVVYLLAREASLLYVTEAGLACVLPVVPLFETIEDLEISPGILDAFLAHPVSQASRALRQTSVQQVMV GYSDSNKDGGILASLWSLYRSQGTLAAVGAKHHVRVRFFHGRGGTISRGAGPTHRFLNALPAAALAGDLRMTEQGETIAQ KYANHITAVYNLELMVAGVTEATLLGSQRDQTPHSLAPIMDVLTAYSRQRYETLIQTPGFIQFFGQATPIDVIEQGKIGS RPARRTGQRTLGDLRAIPWVFSWSQARFFLSGWYGVGSSLAWLAEQHPEQFDQLKQAAFEWYPLKYLLTNVSTSMLSADL ATMQAYSQLVEDPSVRQPIMAAIEAEFKQTQQQLELIFGGSLAERRPRIYRMLQGRQSRLSQLHQQQINLLHTWRSLPSE QIPERERLLTQLLLTVNAIASGLRTTG
Specific function: Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=880, Percent_Identity=30.2272727272727, Blast_Score=278, Evalue=1e-75,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 101412; Mature: 101281
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLPSYDFADLIKADHDAEFVLTCFAEVLQELGEAELAAYLGLPTTASINQTITPERAI CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHH QAASLSFQLLNMVEENAAAQQRRIREAAEGFNAEVGLWGNTLQSLSQAGFSAEQIGAALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH QIYVEPVLTAHPTEAKRATMLEHYRRLYLLLVKRENPIWTPLEQQALRDEIKVELERLWR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHC TGEIFLEKPSVADELRNILHYLRHVFPASLVTLDLRLQQAWQLQGFDRRLLPTTEQLPHV CCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC QFGTWVGGDRDGHPLVTAAVTRFALQELRRNALEVLHEQLVQLVIKLSLSDRLQPPHAAL EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LEALDASAAALGQRGQMALARNPEEPWRQWINLIIARLPESGQLRQPWQYRSSSETVADL HHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHH QFLAEQLHAVGAQRLVLNDLQPVIRSVQTLGFHSAVLDIRQNSKFHDLAVEQLLQAAGFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC DYQFSSWPEEQRLELLNRELQSARPFAHPSLELGNEASAVRDCYRVLADEIAQHGTAGLG CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH SLIISMTRSLSDLLVVYLLAREASLLYVTEAGLACVLPVVPLFETIEDLEISPGILDAFL HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH AHPVSQASRALRQTSVQQVMVGYSDSNKDGGILASLWSLYRSQGTLAAVGAKHHVRVRFF HCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEEEEEE HGRGGTISRGAGPTHRFLNALPAAALAGDLRMTEQGETIAQKYANHITAVYNLELMVAGV ECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECC TEATLLGSQRDQTPHSLAPIMDVLTAYSRQRYETLIQTPGFIQFFGQATPIDVIEQGKIG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHCCCCCC SRPARRTGQRTLGDLRAIPWVFSWSQARFFLSGWYGVGSSLAWLAEQHPEQFDQLKQAAF CCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHH EWYPLKYLLTNVSTSMLSADLATMQAYSQLVEDPSVRQPIMAAIEAEFKQTQQQLELIFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GSLAERRPRIYRMLQGRQSRLSQLHQQQINLLHTWRSLPSEQIPERERLLTQLLLTVNAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH ASGLRTTG HHHHCCCC >Mature Secondary Structure ANLPSYDFADLIKADHDAEFVLTCFAEVLQELGEAELAAYLGLPTTASINQTITPERAI CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHH QAASLSFQLLNMVEENAAAQQRRIREAAEGFNAEVGLWGNTLQSLSQAGFSAEQIGAALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH QIYVEPVLTAHPTEAKRATMLEHYRRLYLLLVKRENPIWTPLEQQALRDEIKVELERLWR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHC TGEIFLEKPSVADELRNILHYLRHVFPASLVTLDLRLQQAWQLQGFDRRLLPTTEQLPHV CCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC QFGTWVGGDRDGHPLVTAAVTRFALQELRRNALEVLHEQLVQLVIKLSLSDRLQPPHAAL EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LEALDASAAALGQRGQMALARNPEEPWRQWINLIIARLPESGQLRQPWQYRSSSETVADL HHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHH QFLAEQLHAVGAQRLVLNDLQPVIRSVQTLGFHSAVLDIRQNSKFHDLAVEQLLQAAGFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC DYQFSSWPEEQRLELLNRELQSARPFAHPSLELGNEASAVRDCYRVLADEIAQHGTAGLG CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH SLIISMTRSLSDLLVVYLLAREASLLYVTEAGLACVLPVVPLFETIEDLEISPGILDAFL HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH AHPVSQASRALRQTSVQQVMVGYSDSNKDGGILASLWSLYRSQGTLAAVGAKHHVRVRFF HCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCEEEEEEE HGRGGTISRGAGPTHRFLNALPAAALAGDLRMTEQGETIAQKYANHITAVYNLELMVAGV ECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEECC TEATLLGSQRDQTPHSLAPIMDVLTAYSRQRYETLIQTPGFIQFFGQATPIDVIEQGKIG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHCCCCCC SRPARRTGQRTLGDLRAIPWVFSWSQARFFLSGWYGVGSSLAWLAEQHPEQFDQLKQAAF CCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHH EWYPLKYLLTNVSTSMLSADLATMQAYSQLVEDPSVRQPIMAAIEAEFKQTQQQLELIFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GSLAERRPRIYRMLQGRQSRLSQLHQQQINLLHTWRSLPSEQIPERERLLTQLLLTVNAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH ASGLRTTG HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9168622; 7961516 [H]