| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897284
Identifier: 159897284
GI number: 159897284
Start: 858261
End: 859337
Strand: Reverse
Name: 159897284
Synonym: Haur_0755
Alternate gene names: NA
Gene position: 859337-858261 (Counterclockwise)
Preceding gene: 159897285
Following gene: 159897264
Centisome position: 13.54
GC content: 50.42
Gene sequence:
>1077_bases ATGGATTCCTATCAACCAAGTAGCGATGAACGGCAAGCGATGCGGGCATTTCTGCAACGCGCCGAGGTGCGCATCTCGAC CATGCACCGGATTGCTGGGGTGTTTTTGAATGGGGCTGGCTTGTTGATTTTGTTGCCAGTGTTTTTTCGCGATGCGATCA GCGATATCAACAAAATCGTGCTGACCCAGATTGAGCAATTGTACAATCTCTGGCAGGCGGGCCAATTTTCATGGTCGGCA ACCGCCGATTTGGGCTTGTATATCTTGCTGTTTATTCCGTTTATCGCCACCTTGGGCATCCCGCTGTATGCTTTTTTGCT GTTGCTCAAGGATATTGTCTATTTCTATTTTGCCAACCAAAGCCCAGGCTTTACCCACAAATTGTTTAACCCGCGCTTTA TTCTTTCGGGCTTGGCCTTCTCCACCGACGAAGCGCCAGCAGTCAAACGCCTGGTAATTCAGCATCAATATAATTCCGAT TTGCTGGAGTTTATTTTGCCTTTCGAGCGCCACGAAGCCGCTTTTTATGATCATGTCTATCAGCAAAGCGCGGGCTTGAT CGTGCCGCCCAGCCGTGATCCAGCCCAGCTTGCCAGCCAAGGAGTTAATCAAAGTCAAGTCAGTCAGCAGGCGATCGATC GCTTTAACACGGCTTTGGGTTTATCGGGCTTTTTGGATCGCACGTTGATCGAAGAGGTAGCGCGAACTGAAATTTCAGTT GTCCGCTATGCCTTGTGTTTGCGGCGCTTGGTGTTGCGCTACATCAAAGCCTTGTTGATGTTCGTCTGGACAACCTTGCT TTCGTTCATTCTGGTTTCGTTTCTGCAACATCTGCAACCGCTGGTGATTCTGGCGGTGGGCTATGTGGTTTGGTCGGCGC TCACGCCCTTGGTGGTGCGTATGCCCACCGACTGGATTTGGCAGGCCTTGCGCGAGGATGTTAATCTCAAAGGCGTGGCG CGTGATGAAGAAATTACCCGTTTCGAACGCTATGTGATTCGGGTTTGTCGGCTCACGCTGGCAATCGCCATCTTGACCCT ACTTAGTGAAATTGGGCGTTTGATTGTACATGTTTAG
Upstream 100 bases:
>100_bases CGCTGCCAACCGAAGAAGGCGCGGAGTAGCTTTCGCTCAACACACGAACCAGCCTCTAGCAGCAATGCTAGGGGCTTTTT GAATTAAAGGGTCAGATCCA
Downstream 100 bases:
>100_bases GCATATCATGACCTCATCCACAACCTAAACCTTTCAAAGATTGGGTTTTAACAATCATTGTAGATCACCACCCTTCCGTC CCGCCTCAAGGCGGGAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MDSYQPSSDERQAMRAFLQRAEVRISTMHRIAGVFLNGAGLLILLPVFFRDAISDINKIVLTQIEQLYNLWQAGQFSWSA TADLGLYILLFIPFIATLGIPLYAFLLLLKDIVYFYFANQSPGFTHKLFNPRFILSGLAFSTDEAPAVKRLVIQHQYNSD LLEFILPFERHEAAFYDHVYQQSAGLIVPPSRDPAQLASQGVNQSQVSQQAIDRFNTALGLSGFLDRTLIEEVARTEISV VRYALCLRRLVLRYIKALLMFVWTTLLSFILVSFLQHLQPLVILAVGYVVWSALTPLVVRMPTDWIWQALREDVNLKGVA RDEEITRFERYVIRVCRLTLAIAILTLLSEIGRLIVHV
Sequences:
>Translated_358_residues MDSYQPSSDERQAMRAFLQRAEVRISTMHRIAGVFLNGAGLLILLPVFFRDAISDINKIVLTQIEQLYNLWQAGQFSWSA TADLGLYILLFIPFIATLGIPLYAFLLLLKDIVYFYFANQSPGFTHKLFNPRFILSGLAFSTDEAPAVKRLVIQHQYNSD LLEFILPFERHEAAFYDHVYQQSAGLIVPPSRDPAQLASQGVNQSQVSQQAIDRFNTALGLSGFLDRTLIEEVARTEISV VRYALCLRRLVLRYIKALLMFVWTTLLSFILVSFLQHLQPLVILAVGYVVWSALTPLVVRMPTDWIWQALREDVNLKGVA RDEEITRFERYVIRVCRLTLAIAILTLLSEIGRLIVHV >Mature_358_residues MDSYQPSSDERQAMRAFLQRAEVRISTMHRIAGVFLNGAGLLILLPVFFRDAISDINKIVLTQIEQLYNLWQAGQFSWSA TADLGLYILLFIPFIATLGIPLYAFLLLLKDIVYFYFANQSPGFTHKLFNPRFILSGLAFSTDEAPAVKRLVIQHQYNSD LLEFILPFERHEAAFYDHVYQQSAGLIVPPSRDPAQLASQGVNQSQVSQQAIDRFNTALGLSGFLDRTLIEEVARTEISV VRYALCLRRLVLRYIKALLMFVWTTLLSFILVSFLQHLQPLVILAVGYVVWSALTPLVVRMPTDWIWQALREDVNLKGVA RDEEITRFERYVIRVCRLTLAIAILTLLSEIGRLIVHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40851; Mature: 40851
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSYQPSSDERQAMRAFLQRAEVRISTMHRIAGVFLNGAGLLILLPVFFRDAISDINKIV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LTQIEQLYNLWQAGQFSWSATADLGLYILLFIPFIATLGIPLYAFLLLLKDIVYFYFANQ HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPGFTHKLFNPRFILSGLAFSTDEAPAVKRLVIQHQYNSDLLEFILPFERHEAAFYDHVY CCCCHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHH QQSAGLIVPPSRDPAQLASQGVNQSQVSQQAIDRFNTALGLSGFLDRTLIEEVARTEISV HHCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRYALCLRRLVLRYIKALLMFVWTTLLSFILVSFLQHLQPLVILAVGYVVWSALTPLVVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPTDWIWQALREDVNLKGVARDEEITRFERYVIRVCRLTLAIAILTLLSEIGRLIVHV CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDSYQPSSDERQAMRAFLQRAEVRISTMHRIAGVFLNGAGLLILLPVFFRDAISDINKIV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LTQIEQLYNLWQAGQFSWSATADLGLYILLFIPFIATLGIPLYAFLLLLKDIVYFYFANQ HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPGFTHKLFNPRFILSGLAFSTDEAPAVKRLVIQHQYNSDLLEFILPFERHEAAFYDHVY CCCCHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHH QQSAGLIVPPSRDPAQLASQGVNQSQVSQQAIDRFNTALGLSGFLDRTLIEEVARTEISV HHCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRYALCLRRLVLRYIKALLMFVWTTLLSFILVSFLQHLQPLVILAVGYVVWSALTPLVVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPTDWIWQALREDVNLKGVARDEEITRFERYVIRVCRLTLAIAILTLLSEIGRLIVHV CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA