| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is ywzG [H]
Identifier: 159897264
GI number: 159897264
Start: 843895
End: 844230
Strand: Reverse
Name: ywzG [H]
Synonym: Haur_0735
Alternate gene names: 159897264
Gene position: 844230-843895 (Counterclockwise)
Preceding gene: 159897284
Following gene: 159897263
Centisome position: 13.3
GC content: 52.38
Gene sequence:
>336_bases ATGTTTGAACGTGAACTTCTTAAAGGTAGCCTCGGTTTGATGCTAATGGCGCTCGTCGAGCAAGGCCCAATGTATGGCTA CCTGATCGCGAAGGAAATTCGTGCGCTCACCGACGATGTAATTGATCTCAAAGAGGGGTCGTTATATCCGGCGCTCCATC GGTTGGAAAAAGAAGGGATGATCGAAGGCTTTTGGCAACGGCGCGAAGATGGTGTTGATCGCCGCTACTATCGCATAACA GCGGCTGGTCAGGCTGTCCTAGACGAACGCCGTGCCCAATGGAGTCGATTTAGTGCCGCAGTTTCAAAGGTGGTCTCCGA TGCACCGTCCCAATGA
Upstream 100 bases:
>100_bases ATGGTTAATCATGGGCCAAATTTGCATGTTTGACAAGCAGCCTTCAGATCTATTATTCTATACCTTGTATTACAAAGTAT CCTTTATCGCAAGGTAGCCT
Downstream 100 bases:
>100_bases TAGCTATTTTGCTGAACTCGAACAAGAATTAGCAGCGCTCAGCCTTGCCGAACGTGAAGCGATTTTGCGCGAATTACGCT CGCACTACGACGATGCTGCC
Product: PadR-like family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MFERELLKGSLGLMLMALVEQGPMYGYLIAKEIRALTDDVIDLKEGSLYPALHRLEKEGMIEGFWQRREDGVDRRYYRIT AAGQAVLDERRAQWSRFSAAVSKVVSDAPSQ
Sequences:
>Translated_111_residues MFERELLKGSLGLMLMALVEQGPMYGYLIAKEIRALTDDVIDLKEGSLYPALHRLEKEGMIEGFWQRREDGVDRRYYRIT AAGQAVLDERRAQWSRFSAAVSKVVSDAPSQ >Mature_111_residues MFERELLKGSLGLMLMALVEQGPMYGYLIAKEIRALTDDVIDLKEGSLYPALHRLEKEGMIEGFWQRREDGVDRRYYRIT AAGQAVLDERRAQWSRFSAAVSKVVSDAPSQ
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005149 - InterPro: IPR011991 [H]
Pfam domain/function: PF03551 PadR [H]
EC number: NA
Molecular weight: Translated: 12667; Mature: 12667
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFERELLKGSLGLMLMALVEQGPMYGYLIAKEIRALTDDVIDLKEGSLYPALHRLEKEGM CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH IEGFWQRREDGVDRRYYRITAAGQAVLDERRAQWSRFSAAVSKVVSDAPSQ HHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFERELLKGSLGLMLMALVEQGPMYGYLIAKEIRALTDDVIDLKEGSLYPALHRLEKEGM CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH IEGFWQRREDGVDRRYYRITAAGQAVLDERRAQWSRFSAAVSKVVSDAPSQ HHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]