Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is ywzG [H]

Identifier: 159897264

GI number: 159897264

Start: 843895

End: 844230

Strand: Reverse

Name: ywzG [H]

Synonym: Haur_0735

Alternate gene names: 159897264

Gene position: 844230-843895 (Counterclockwise)

Preceding gene: 159897284

Following gene: 159897263

Centisome position: 13.3

GC content: 52.38

Gene sequence:

>336_bases
ATGTTTGAACGTGAACTTCTTAAAGGTAGCCTCGGTTTGATGCTAATGGCGCTCGTCGAGCAAGGCCCAATGTATGGCTA
CCTGATCGCGAAGGAAATTCGTGCGCTCACCGACGATGTAATTGATCTCAAAGAGGGGTCGTTATATCCGGCGCTCCATC
GGTTGGAAAAAGAAGGGATGATCGAAGGCTTTTGGCAACGGCGCGAAGATGGTGTTGATCGCCGCTACTATCGCATAACA
GCGGCTGGTCAGGCTGTCCTAGACGAACGCCGTGCCCAATGGAGTCGATTTAGTGCCGCAGTTTCAAAGGTGGTCTCCGA
TGCACCGTCCCAATGA

Upstream 100 bases:

>100_bases
ATGGTTAATCATGGGCCAAATTTGCATGTTTGACAAGCAGCCTTCAGATCTATTATTCTATACCTTGTATTACAAAGTAT
CCTTTATCGCAAGGTAGCCT

Downstream 100 bases:

>100_bases
TAGCTATTTTGCTGAACTCGAACAAGAATTAGCAGCGCTCAGCCTTGCCGAACGTGAAGCGATTTTGCGCGAATTACGCT
CGCACTACGACGATGCTGCC

Product: PadR-like family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MFERELLKGSLGLMLMALVEQGPMYGYLIAKEIRALTDDVIDLKEGSLYPALHRLEKEGMIEGFWQRREDGVDRRYYRIT
AAGQAVLDERRAQWSRFSAAVSKVVSDAPSQ

Sequences:

>Translated_111_residues
MFERELLKGSLGLMLMALVEQGPMYGYLIAKEIRALTDDVIDLKEGSLYPALHRLEKEGMIEGFWQRREDGVDRRYYRIT
AAGQAVLDERRAQWSRFSAAVSKVVSDAPSQ
>Mature_111_residues
MFERELLKGSLGLMLMALVEQGPMYGYLIAKEIRALTDDVIDLKEGSLYPALHRLEKEGMIEGFWQRREDGVDRRYYRIT
AAGQAVLDERRAQWSRFSAAVSKVVSDAPSQ

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 12667; Mature: 12667

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFERELLKGSLGLMLMALVEQGPMYGYLIAKEIRALTDDVIDLKEGSLYPALHRLEKEGM
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH
IEGFWQRREDGVDRRYYRITAAGQAVLDERRAQWSRFSAAVSKVVSDAPSQ
HHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFERELLKGSLGLMLMALVEQGPMYGYLIAKEIRALTDDVIDLKEGSLYPALHRLEKEGM
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH
IEGFWQRREDGVDRRYYRITAAGQAVLDERRAQWSRFSAAVSKVVSDAPSQ
HHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]