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The map label for this gene is yezE [H]

Identifier: 159897245

GI number: 159897245

Start: 822171

End: 822818

Strand: Reverse

Name: yezE [H]

Synonym: Haur_0716

Alternate gene names: 159897245

Gene position: 822818-822171 (Counterclockwise)

Preceding gene: 159897262

Following gene: 159897244

Centisome position: 12.96

GC content: 48.92

Gene sequence:

>648_bases
ATGATCATTGACTTATCGTTCCAACATATGCTATACTTCGCTGTAAGCAGGAGTATGAGACGACTTATGGCAGGCAAGAA
AGCATTTGAGCCTCAACGGGTTCTCGAAAAAGCCATGAACGCCTTTTGGGAACGTGGGTACGAAGGGCTATCAATCGAAG
ATCTCGTCCAAGTTACGGGAATCGGGCGCGGTAGCCTCTATGGAACGTTTGGCGATAAACATGCGCTGTACCTAGCGGCG
CTTAATCAGTATACTGCCGCTATTAAAGCCCAAACTATGACTATTTTGGCGCAAACTGGCTCACTCCAAGTTGTATTAGG
CCAGCTTTTCCAAGCCCAGGTTGATGCTTTGCTGCACGACCCAGCGCGGCGTGGCTGTTTTTTGGTTAATGCATCCTTAG
AAATAGCTCCACATGATCATGCGGTTAACGGGATTATCCAGTCGGCATTGAATGAGTTCGAAGAAGCACTCTATCGACTG
CTGATCAAAGCGCAGGTTGCAGGTGAGCTCTCGTGGCAACACGATCCCCATCAATTGGCGCATTTCTTGGTAGCAACCTT
TGTCAGCCTGCGCGTGCTAGCGCGGAGCCAACAACAGCGGGGAATGCTCGACGATATCGTGAAAACAGCTTTATCGATTT
TCAACTAA

Upstream 100 bases:

>100_bases
CCCTCGTTGATCGCTACTCGCAAGCGTTTGAGGTTAAAACGACTGCACCTCTATTCTTAGCACAATTGAATGAGCACGAT
CTGGTCTAGCACTTCCATTT

Downstream 100 bases:

>100_bases
ATTTTTTTGACTTCATGTTTGAACGATTATTCAAACATAACCATTCGTAAAGGAACAGATTAATGACATCGCAACAAAAG
GTCGTGCTCATCACAGGCGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MIIDLSFQHMLYFAVSRSMRRLMAGKKAFEPQRVLEKAMNAFWERGYEGLSIEDLVQVTGIGRGSLYGTFGDKHALYLAA
LNQYTAAIKAQTMTILAQTGSLQVVLGQLFQAQVDALLHDPARRGCFLVNASLEIAPHDHAVNGIIQSALNEFEEALYRL
LIKAQVAGELSWQHDPHQLAHFLVATFVSLRVLARSQQQRGMLDDIVKTALSIFN

Sequences:

>Translated_215_residues
MIIDLSFQHMLYFAVSRSMRRLMAGKKAFEPQRVLEKAMNAFWERGYEGLSIEDLVQVTGIGRGSLYGTFGDKHALYLAA
LNQYTAAIKAQTMTILAQTGSLQVVLGQLFQAQVDALLHDPARRGCFLVNASLEIAPHDHAVNGIIQSALNEFEEALYRL
LIKAQVAGELSWQHDPHQLAHFLVATFVSLRVLARSQQQRGMLDDIVKTALSIFN
>Mature_215_residues
MIIDLSFQHMLYFAVSRSMRRLMAGKKAFEPQRVLEKAMNAFWERGYEGLSIEDLVQVTGIGRGSLYGTFGDKHALYLAA
LNQYTAAIKAQTMTILAQTGSLQVVLGQLFQAQVDALLHDPARRGCFLVNASLEIAPHDHAVNGIIQSALNEFEEALYRL
LIKAQVAGELSWQHDPHQLAHFLVATFVSLRVLARSQQQRGMLDDIVKTALSIFN

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081833, Length=200, Percent_Identity=26.5, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 23985; Mature: 23985

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIDLSFQHMLYFAVSRSMRRLMAGKKAFEPQRVLEKAMNAFWERGYEGLSIEDLVQVTG
CEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
IGRGSLYGTFGDKHALYLAALNQYTAAIKAQTMTILAQTGSLQVVLGQLFQAQVDALLHD
CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHC
PARRGCFLVNASLEIAPHDHAVNGIIQSALNEFEEALYRLLIKAQVAGELSWQHDPHQLA
HHHCCEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
HFLVATFVSLRVLARSQQQRGMLDDIVKTALSIFN
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIIDLSFQHMLYFAVSRSMRRLMAGKKAFEPQRVLEKAMNAFWERGYEGLSIEDLVQVTG
CEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
IGRGSLYGTFGDKHALYLAALNQYTAAIKAQTMTILAQTGSLQVVLGQLFQAQVDALLHD
CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHC
PARRGCFLVNASLEIAPHDHAVNGIIQSALNEFEEALYRLLIKAQVAGELSWQHDPHQLA
HHHCCEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
HFLVATFVSLRVLARSQQQRGMLDDIVKTALSIFN
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]