| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is phnB [C]
Identifier: 159897241
GI number: 159897241
Start: 818621
End: 819067
Strand: Reverse
Name: phnB [C]
Synonym: Haur_0712
Alternate gene names: 159897241
Gene position: 819067-818621 (Counterclockwise)
Preceding gene: 159897243
Following gene: 159897240
Centisome position: 12.91
GC content: 52.57
Gene sequence:
>447_bases ATGACGATCGCTGTTACCCCTCATCTCAACTTTCATGGCAATGCCCGTCAAGCGCTTGAGTTTTATCAGGCTGTGTTCGA AGGGGAGCTTGTGCTTACCACTTACGCTGACGTTGGTGCACCAAAAGACACGCCGATCGCTGATACGATTATGTGGGGAC AAGTAACGACGGCCAGCGGTTTCCGGCTGATGGCCTACGATGTTCCAACCACAGAGCAGCTACCCGCACTACAAACCGTG ACTTCCCGCGCCCATGGGCTAACGCTGACTCAAGCATCATTCTTTATCTCGCTCCGTGGGCAACAGGTTAACGAGGTTAT GGAGTTGTGGGCCAAACTGGCTGAGCAGGCAACAATCATCGAGCCGATTACCCAAACGCCTTGGTCACAGCTATTTGGCA TGCTTACCGATCGTTTTGGGATTACCTGGGTTGTCGATGTGGTATAG
Upstream 100 bases:
>100_bases AATTCTGACCGCATTATACATTATACTCACGGAGTAAGATCAATTTATGAATGACTGACACAGCAAATAGTGACAGTCGT GAATGACCAAGGAGCAAATT
Downstream 100 bases:
>100_bases CGGTTAAAGCGCCAATTAATCTATCTAACCCCCTAATCAGCATCTCTAGCATCCGACGGAATAGATTCGCCCTGAAAAGC AGGCTATTCCGTCGGCTGGA
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; PhnB Protein; 3-Demethylubiquinone-9 3-Methyltransferase; Oxygenase; Glyoxalase
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTIAVTPHLNFHGNARQALEFYQAVFEGELVLTTYADVGAPKDTPIADTIMWGQVTTASGFRLMAYDVPTTEQLPALQTV TSRAHGLTLTQASFFISLRGQQVNEVMELWAKLAEQATIIEPITQTPWSQLFGMLTDRFGITWVVDVV
Sequences:
>Translated_148_residues MTIAVTPHLNFHGNARQALEFYQAVFEGELVLTTYADVGAPKDTPIADTIMWGQVTTASGFRLMAYDVPTTEQLPALQTV TSRAHGLTLTQASFFISLRGQQVNEVMELWAKLAEQATIIEPITQTPWSQLFGMLTDRFGITWVVDVV >Mature_147_residues TIAVTPHLNFHGNARQALEFYQAVFEGELVLTTYADVGAPKDTPIADTIMWGQVTTASGFRLMAYDVPTTEQLPALQTVT SRAHGLTLTQASFFISLRGQQVNEVMELWAKLAEQATIIEPITQTPWSQLFGMLTDRFGITWVVDVV
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16404; Mature: 16273
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAVTPHLNFHGNARQALEFYQAVFEGELVLTTYADVGAPKDTPIADTIMWGQVTTASG CEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCEECCCC FRLMAYDVPTTEQLPALQTVTSRAHGLTLTQASFFISLRGQQVNEVMELWAKLAEQATII CEEEEEECCCCCCCCHHHHHHHHHCCEEEEEHEEEEEECCCHHHHHHHHHHHHHHCCCEE EPITQTPWSQLFGMLTDRFGITWVVDVV CCCCCCCHHHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure TIAVTPHLNFHGNARQALEFYQAVFEGELVLTTYADVGAPKDTPIADTIMWGQVTTASG EEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCEECCCC FRLMAYDVPTTEQLPALQTVTSRAHGLTLTQASFFISLRGQQVNEVMELWAKLAEQATII CEEEEEECCCCCCCCHHHHHHHHHCCEEEEEHEEEEEECCCHHHHHHHHHHHHHHCCCEE EPITQTPWSQLFGMLTDRFGITWVVDVV CCCCCCCHHHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA