The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897203

Identifier: 159897203

GI number: 159897203

Start: 772320

End: 772769

Strand: Reverse

Name: 159897203

Synonym: Haur_0674

Alternate gene names: NA

Gene position: 772769-772320 (Counterclockwise)

Preceding gene: 159897204

Following gene: 159897202

Centisome position: 12.18

GC content: 57.33

Gene sequence:

>450_bases
ATGACAACATCCGATGTGTTATTTGATCTGCACCGCCTTGACCCCAGCCGCAAACTCATCAAAGGCCTTGCCTGCACGCT
CGGCTGGGGCAATAGCATTGTCACCACCGTTTCGACCCTGAGCGATTTTCAGCACTGGCTGTGGGGGATTCGTGATTATC
GCGGCATCCTCGCAGGGCTAGGGGTCGCGCTGTTTCTCTTCCTTGGCCAACTCTATACCTTGCGCCGGACTGCGTGGGGC
TATGGCTGTTTTCTGGCTCCCGATGCCATGATTACGGCTTATAAATGGTGTGAATGGTTGTTTTACCCCATCGCCTACAA
ACTGGCTTCCGGCCTGCCAGCGCTGGCCCTCGCGTGGGGTGCTGGCTTGGCACTCGGGGTGGTCTCAGCGCGGTGGCCCG
AATATCTCGCCTTTGGCCGCACTGTACAGGAGCATCCGCATGGATATTAA

Upstream 100 bases:

>100_bases
TCGTTTTGAAACACAAACCGCCGATGAAATCAGCATCGGCGGCGTGCATCACCGGAGAACACCAAAGTGATGCAGCGCTA
GTATATCAAAGGAGAACACG

Downstream 100 bases:

>100_bases
TTCGCCGTGGCTCTATCCGTTGATTTTTCTGTTTGCCTGTAGTTTTGTTGGCACGTTCCTCTGGTGGCATGCACGCACCC
CTGCCAGCGAACGTCGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MTTSDVLFDLHRLDPSRKLIKGLACTLGWGNSIVTTVSTLSDFQHWLWGIRDYRGILAGLGVALFLFLGQLYTLRRTAWG
YGCFLAPDAMITAYKWCEWLFYPIAYKLASGLPALALAWGAGLALGVVSARWPEYLAFGRTVQEHPHGY

Sequences:

>Translated_149_residues
MTTSDVLFDLHRLDPSRKLIKGLACTLGWGNSIVTTVSTLSDFQHWLWGIRDYRGILAGLGVALFLFLGQLYTLRRTAWG
YGCFLAPDAMITAYKWCEWLFYPIAYKLASGLPALALAWGAGLALGVVSARWPEYLAFGRTVQEHPHGY
>Mature_148_residues
TTSDVLFDLHRLDPSRKLIKGLACTLGWGNSIVTTVSTLSDFQHWLWGIRDYRGILAGLGVALFLFLGQLYTLRRTAWGY
GCFLAPDAMITAYKWCEWLFYPIAYKLASGLPALALAWGAGLALGVVSARWPEYLAFGRTVQEHPHGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16645; Mature: 16513

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSDVLFDLHRLDPSRKLIKGLACTLGWGNSIVTTVSTLSDFQHWLWGIRDYRGILAGL
CCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVALFLFLGQLYTLRRTAWGYGCFLAPDAMITAYKWCEWLFYPIAYKLASGLPALALAWG
HHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AGLALGVVSARWPEYLAFGRTVQEHPHGY
HHHHHHHHHHCCHHHHHHCCHHHCCCCCC
>Mature Secondary Structure 
TTSDVLFDLHRLDPSRKLIKGLACTLGWGNSIVTTVSTLSDFQHWLWGIRDYRGILAGL
CCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVALFLFLGQLYTLRRTAWGYGCFLAPDAMITAYKWCEWLFYPIAYKLASGLPALALAWG
HHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AGLALGVVSARWPEYLAFGRTVQEHPHGY
HHHHHHHHHHCCHHHHHHCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA