| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897202
Identifier: 159897202
GI number: 159897202
Start: 771218
End: 772330
Strand: Reverse
Name: 159897202
Synonym: Haur_0673
Alternate gene names: NA
Gene position: 772330-771218 (Counterclockwise)
Preceding gene: 159897203
Following gene: 159897201
Centisome position: 12.17
GC content: 56.96
Gene sequence:
>1113_bases ATGGATATTAATTCGCCGTGGCTCTATCCGTTGATTTTTCTGTTTGCCTGTAGTTTTGTTGGCACGTTCCTCTGGTGGCA TGCACGCACCCCTGCCAGCGAACGTCGCCCTGCCGCTGCGCCTACCGCACCCGCCCGTGCTGCGAGTCCGGCGCGGCCAG CGGTGGTGGATCGTCCGCGTAGTGAAGCCCCACTGGAACCCACGACCACCAGTTTGCCAACCTATTCATGGCCTATGCTG CTCGATACCTTAGCCAAGCGCCCGCATATTGGCATCGCTGGCCCTTCGCGCCAAGGCAAGTCGGTACTGAGTATGGCCCT GACCTATCTTCGCGCCGTCGATGGTCACCAGCTGGTGATTCTCAACTCGCATGCGCGACCGAATGACTACGGCGGCTTGC CACAAGTCTACGACTATCCCGCAATCAACCGTGTGATGAAAGCGTTACTTGCTGAGCTGGGGCGACGCAAAGCCGCTGCG GCCACAGGTGCAGATAGTTTTGATCCGATTACGGTGGTGTTGGAAGAAGCCCCCGATGTGATGAGCAAGGTGCATGGCGA AGATGGCTCGGCTGCCAAACCCAAAGTGCCTGTTGCCCAGCGCTTTGTCGGCGAAATGTTACGCCAAGCGGCCAAGTATC GCATGCATCTTATCCTCGTGACCCAAACCACGTTGGTCAAACCGCTGGGCATTGAAGGCGATAGCGAAGCACTCGATAAC CTACTGTGGATTGCGATTGGTGATCGGGCCTTGGAGAAAATGAAGTCGCCCGTGGTTGCCCCATGGCCTGCGGCGATTGA ATGGAATTGTCAATGGTTTTGGTGCGATCGCGAACCTGCGTGGATGTTGTCCACCCGCCCGATTGACACAGCACGCCTCT GGCGAGTTCCCGATTCCATGGGCGATGCAGTGGGTGATTCCCCGCTTGGAACCATGGGAACTAGCGATGAGAGCCTGATC GACGAGGCCACCCTGACCGATGTCATCCTGATTACCAAGCTCATTCTTGCAGGCAAAAGTGGCAACGAAATTATTGACAG CTTGGGTGGCAAACGCACGCGCCGTCTCAGCCAAATTCGCCAGGTCAAGCAGGTGCTTGATCTTGGTGCTTAA
Upstream 100 bases:
>100_bases GCGCTGGCCCTCGCGTGGGGTGCTGGCTTGGCACTCGGGGTGGTCTCAGCGCGGTGGCCCGAATATCTCGCCTTTGGCCG CACTGTACAGGAGCATCCGC
Downstream 100 bases:
>100_bases TAGCGAAAGGAATCTTTTTTATGACCACGACACCAATAACCATTACCTTGACCGAAACCCTTGATCTGCCCAAGCACGGC CAGCATACTGTGCAAATTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MDINSPWLYPLIFLFACSFVGTFLWWHARTPASERRPAAAPTAPARAASPARPAVVDRPRSEAPLEPTTTSLPTYSWPML LDTLAKRPHIGIAGPSRQGKSVLSMALTYLRAVDGHQLVILNSHARPNDYGGLPQVYDYPAINRVMKALLAELGRRKAAA ATGADSFDPITVVLEEAPDVMSKVHGEDGSAAKPKVPVAQRFVGEMLRQAAKYRMHLILVTQTTLVKPLGIEGDSEALDN LLWIAIGDRALEKMKSPVVAPWPAAIEWNCQWFWCDREPAWMLSTRPIDTARLWRVPDSMGDAVGDSPLGTMGTSDESLI DEATLTDVILITKLILAGKSGNEIIDSLGGKRTRRLSQIRQVKQVLDLGA
Sequences:
>Translated_370_residues MDINSPWLYPLIFLFACSFVGTFLWWHARTPASERRPAAAPTAPARAASPARPAVVDRPRSEAPLEPTTTSLPTYSWPML LDTLAKRPHIGIAGPSRQGKSVLSMALTYLRAVDGHQLVILNSHARPNDYGGLPQVYDYPAINRVMKALLAELGRRKAAA ATGADSFDPITVVLEEAPDVMSKVHGEDGSAAKPKVPVAQRFVGEMLRQAAKYRMHLILVTQTTLVKPLGIEGDSEALDN LLWIAIGDRALEKMKSPVVAPWPAAIEWNCQWFWCDREPAWMLSTRPIDTARLWRVPDSMGDAVGDSPLGTMGTSDESLI DEATLTDVILITKLILAGKSGNEIIDSLGGKRTRRLSQIRQVKQVLDLGA >Mature_370_residues MDINSPWLYPLIFLFACSFVGTFLWWHARTPASERRPAAAPTAPARAASPARPAVVDRPRSEAPLEPTTTSLPTYSWPML LDTLAKRPHIGIAGPSRQGKSVLSMALTYLRAVDGHQLVILNSHARPNDYGGLPQVYDYPAINRVMKALLAELGRRKAAA ATGADSFDPITVVLEEAPDVMSKVHGEDGSAAKPKVPVAQRFVGEMLRQAAKYRMHLILVTQTTLVKPLGIEGDSEALDN LLWIAIGDRALEKMKSPVVAPWPAAIEWNCQWFWCDREPAWMLSTRPIDTARLWRVPDSMGDAVGDSPLGTMGTSDESLI DEATLTDVILITKLILAGKSGNEIIDSLGGKRTRRLSQIRQVKQVLDLGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40484; Mature: 40484
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDINSPWLYPLIFLFACSFVGTFLWWHARTPASERRPAAAPTAPARAASPARPAVVDRPR CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC SEAPLEPTTTSLPTYSWPMLLDTLAKRPHIGIAGPSRQGKSVLSMALTYLRAVDGHQLVI CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE LNSHARPNDYGGLPQVYDYPAINRVMKALLAELGRRKAAAATGADSFDPITVVLEEAPDV ECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHH MSKVHGEDGSAAKPKVPVAQRFVGEMLRQAAKYRMHLILVTQTTLVKPLGIEGDSEALDN HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHCCCCCCCCHHHHHC LLWIAIGDRALEKMKSPVVAPWPAAIEWNCQWFWCDREPAWMLSTRPIDTARLWRVPDSM EEEEEECHHHHHHHCCCCCCCCCCEEEECEEEEEECCCCCEEEECCCCCHHHHEECCHHH GDAVGDSPLGTMGTSDESLIDEATLTDVILITKLILAGKSGNEIIDSLGGKRTRRLSQIR HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHH QVKQVLDLGA HHHHHHHCCC >Mature Secondary Structure MDINSPWLYPLIFLFACSFVGTFLWWHARTPASERRPAAAPTAPARAASPARPAVVDRPR CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC SEAPLEPTTTSLPTYSWPMLLDTLAKRPHIGIAGPSRQGKSVLSMALTYLRAVDGHQLVI CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE LNSHARPNDYGGLPQVYDYPAINRVMKALLAELGRRKAAAATGADSFDPITVVLEEAPDV ECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHH MSKVHGEDGSAAKPKVPVAQRFVGEMLRQAAKYRMHLILVTQTTLVKPLGIEGDSEALDN HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHCCCCCCCCHHHHHC LLWIAIGDRALEKMKSPVVAPWPAAIEWNCQWFWCDREPAWMLSTRPIDTARLWRVPDSM EEEEEECHHHHHHHCCCCCCCCCCEEEECEEEEEECCCCCEEEECCCCCHHHHEECCHHH GDAVGDSPLGTMGTSDESLIDEATLTDVILITKLILAGKSGNEIIDSLGGKRTRRLSQIR HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHH QVKQVLDLGA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA