| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897199
Identifier: 159897199
GI number: 159897199
Start: 768360
End: 769298
Strand: Reverse
Name: 159897199
Synonym: Haur_0670
Alternate gene names: NA
Gene position: 769298-768360 (Counterclockwise)
Preceding gene: 159897200
Following gene: 159897198
Centisome position: 12.12
GC content: 55.48
Gene sequence:
>939_bases ATGACCACCCATACCACCGTTGGCCTTAATCCCACTGAGCTGCACGTTCTCGTCCTCGTTGCTCGGCTTGGTCGATTGCT GTCTCGCCACCTGCGCACAGCGTGGGGCCATCCGTTTACCGTGACAATTCAGACCATCAATCGCACGTTGGCCAAGCTCG TCGATGCCAAGCTGCTGACTTATTGCGAACACTTTCAATCGCATGGCTATGATCCGCGTGGTGCGATCGGCTGGACGCGC CATGGCCGTTTATACAGTCTCACACCCTTCGGCTGGGAGATGATCAAACAGGCCTTTCCGATGCTCGAGGAAGGCAGTGA GCGGCTCGCTCCAACGATGTTCAATCCCCAACATCAAGCGGAACATCAAATTGAATATGCGGAAGTCATCACCAGTCTGA TTCAGTCGCTGCCGTATGTGCCTGGTATTGTCGGCATGAGTAGCTATATCGAGATGGACTTAGGCCCAACCGCACGGCCA CGCGCAGACGGCATCGTCGTGGTACGCCGCTGGATCGATGCGACGCAGCCCGATTGCGAGCGCTCGTCGTTATATCCGTG GCTTGGGATTGGAAAGCAAACAGGTCAGATCGATCAACTCTATGCCATCGAGATCGATCGGGGAACCGAGGAACTGAGTA TCATCACAGGCAAGGCGCATTCCTATGGGGAGTTGTATCGCTCGAAGTATTGGGAAGGGCGGTATAGTTGGCCGCTGATT GCCTTTACGGTGCCGAGCGAACGCCGGAAACGCGCCGTGCTCGATGCGTGGGAAATCGGCTGGCCCGGCAGTCAACTCCT GATTGCCACCATCGACGATGTTCGTGAATCGGGTATTCTCACACCAATCTGGACAGCCCAGTATACGAAACACGGCCAAC GGATTCAGCAGATCCATCGCTTTTTACGGGCGGGGTGGTTTGAGCAAATCATCGCATAA
Upstream 100 bases:
>100_bases AAGAAAGATGCAGCCTTTTTAGAGCGCAGCCTCACCGTATCAACCCCTTCCTGAGAATACCTATTTTGCAGCAACCAATT ATCGCGTGAGGAGTGATTGA
Downstream 100 bases:
>100_bases AGATACGAACCGCGCTTCACGCAAAGGTGCGGTCGTGTGAAAAGCAAAAGGCATTAGGACTGTTCAACATGTGGAATCAA TAAGTAGAATAGGCTACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTTHTTVGLNPTELHVLVLVARLGRLLSRHLRTAWGHPFTVTIQTINRTLAKLVDAKLLTYCEHFQSHGYDPRGAIGWTR HGRLYSLTPFGWEMIKQAFPMLEEGSERLAPTMFNPQHQAEHQIEYAEVITSLIQSLPYVPGIVGMSSYIEMDLGPTARP RADGIVVVRRWIDATQPDCERSSLYPWLGIGKQTGQIDQLYAIEIDRGTEELSIITGKAHSYGELYRSKYWEGRYSWPLI AFTVPSERRKRAVLDAWEIGWPGSQLLIATIDDVRESGILTPIWTAQYTKHGQRIQQIHRFLRAGWFEQIIA
Sequences:
>Translated_312_residues MTTHTTVGLNPTELHVLVLVARLGRLLSRHLRTAWGHPFTVTIQTINRTLAKLVDAKLLTYCEHFQSHGYDPRGAIGWTR HGRLYSLTPFGWEMIKQAFPMLEEGSERLAPTMFNPQHQAEHQIEYAEVITSLIQSLPYVPGIVGMSSYIEMDLGPTARP RADGIVVVRRWIDATQPDCERSSLYPWLGIGKQTGQIDQLYAIEIDRGTEELSIITGKAHSYGELYRSKYWEGRYSWPLI AFTVPSERRKRAVLDAWEIGWPGSQLLIATIDDVRESGILTPIWTAQYTKHGQRIQQIHRFLRAGWFEQIIA >Mature_311_residues TTHTTVGLNPTELHVLVLVARLGRLLSRHLRTAWGHPFTVTIQTINRTLAKLVDAKLLTYCEHFQSHGYDPRGAIGWTRH GRLYSLTPFGWEMIKQAFPMLEEGSERLAPTMFNPQHQAEHQIEYAEVITSLIQSLPYVPGIVGMSSYIEMDLGPTARPR ADGIVVVRRWIDATQPDCERSSLYPWLGIGKQTGQIDQLYAIEIDRGTEELSIITGKAHSYGELYRSKYWEGRYSWPLIA FTVPSERRKRAVLDAWEIGWPGSQLLIATIDDVRESGILTPIWTAQYTKHGQRIQQIHRFLRAGWFEQIIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35662; Mature: 35531
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHTTVGLNPTELHVLVLVARLGRLLSRHLRTAWGHPFTVTIQTINRTLAKLVDAKLLT CCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHH YCEHFQSHGYDPRGAIGWTRHGRLYSLTPFGWEMIKQAFPMLEEGSERLAPTMFNPQHQA HHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCHHHCCHHHCCCCCCCCCHHH EHQIEYAEVITSLIQSLPYVPGIVGMSSYIEMDLGPTARPRADGIVVVRRWIDATQPDCE HHHHHHHHHHHHHHHHCCCCCCHHCHHHHEEECCCCCCCCCCCCEEEEEEHHCCCCCCCC RSSLYPWLGIGKQTGQIDQLYAIEIDRGTEELSIITGKAHSYGELYRSKYWEGRYSWPLI HHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEE AFTVPSERRKRAVLDAWEIGWPGSQLLIATIDDVRESGILTPIWTAQYTKHGQRIQQIHR EEECCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH FLRAGWFEQIIA HHHHHHHHHHHC >Mature Secondary Structure TTHTTVGLNPTELHVLVLVARLGRLLSRHLRTAWGHPFTVTIQTINRTLAKLVDAKLLT CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHH YCEHFQSHGYDPRGAIGWTRHGRLYSLTPFGWEMIKQAFPMLEEGSERLAPTMFNPQHQA HHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCHHHCCHHHCCCCCCCCCHHH EHQIEYAEVITSLIQSLPYVPGIVGMSSYIEMDLGPTARPRADGIVVVRRWIDATQPDCE HHHHHHHHHHHHHHHHCCCCCCHHCHHHHEEECCCCCCCCCCCCEEEEEEHHCCCCCCCC RSSLYPWLGIGKQTGQIDQLYAIEIDRGTEELSIITGKAHSYGELYRSKYWEGRYSWPLI HHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEE AFTVPSERRKRAVLDAWEIGWPGSQLLIATIDDVRESGILTPIWTAQYTKHGQRIQQIHR EEECCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH FLRAGWFEQIIA HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA