| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897200
Identifier: 159897200
GI number: 159897200
Start: 769345
End: 770334
Strand: Reverse
Name: 159897200
Synonym: Haur_0671
Alternate gene names: NA
Gene position: 770334-769345 (Counterclockwise)
Preceding gene: 159897201
Following gene: 159897199
Centisome position: 12.14
GC content: 33.64
Gene sequence:
>990_bases ATGGATACATCAGGAAATACCCTAGAACTCTGTATTGATATTCAGCAAAAAGTTGATCAGTCCGTAACGAGTATGTATCA GGATTGGTTAGCTGAGGTAAAAAATCGAAGTATTTTCTTTAAATTATATGCAATCATTTATACGATCGTTTCTCTAGGAA TAATATTTAGTTTAAGTAGAAATATGAATTGGCAAGAAATAAATTATCCTATTATCTTTACACTTATAATACTATCTATA CTAGCTATACCATTCTATAATTTAATAATTTATCTAAAGAAAAGATTTAATTTAGGTTCAATATCTATATTAATATTAAT CAAGGTATACTTTATATGCAGTTTATTTTCTATTTATATCATCTTACATAAATATGGGGAGTTCAATATAATTACAAACC TCGCAAACTCAATTCTTTATAGCCTCTTCTTTACTTTTTTTGCATGGATTATGTTTGGACACATAGTAAATAGAACGTTC TTTGTTATCTTCCTAGAACTGCCATATTCAGAATCTCAATGGATACCATCATTTGAGGCTATTCAGATACAATTAGTTCA GACATTGAAAGATACCTTTGATAAACAGCCCCTTTCAAAATTAACAAATGCCCTTGAACTGCTCCATCAACGACGAGAGA GTCGTATTCATCACACAACTATTCTTAGTTTTGCAGTAGCCGTCCTAGCGCTTTTAGGTATTGTTATTTCTATGAATCCT TCCATATTTACTCAAATCGACAAATTCCTCTTACTCTTTAGTATAACGAAACAACCAACTTCAGGTATGAGTATGACCAT GGGTATAGTTATGTTCATTGGTTTGGTTTTGGTGGGCGGCTTTATTAGCGCACGCATTTACTACGGTGCATTTCTTAGCT CATCGACACAGATTGTCTTGCGTGCCTATCTCCAAGATCGCCAGATTGAAGAAGCGAAGAAAGATGCAGCCTTTTTAGAG CGCAGCCTCACCGTATCAACCCCTTCCTGA
Upstream 100 bases:
>100_bases GCTTCGGCATAAACCTGCGTTATATCACATATTCGCAACGTTGCATTACAGTCAACCGTACAAGGCATAGCTCGTCTTTT GATGAAAGGGTTGAACAGCT
Downstream 100 bases:
>100_bases GAATACCTATTTTGCAGCAACCAATTATCGCGTGAGGAGTGATTGAATGACCACCCATACCACCGTTGGCCTTAATCCCA CTGAGCTGCACGTTCTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MDTSGNTLELCIDIQQKVDQSVTSMYQDWLAEVKNRSIFFKLYAIIYTIVSLGIIFSLSRNMNWQEINYPIIFTLIILSI LAIPFYNLIIYLKKRFNLGSISILILIKVYFICSLFSIYIILHKYGEFNIITNLANSILYSLFFTFFAWIMFGHIVNRTF FVIFLELPYSESQWIPSFEAIQIQLVQTLKDTFDKQPLSKLTNALELLHQRRESRIHHTTILSFAVAVLALLGIVISMNP SIFTQIDKFLLLFSITKQPTSGMSMTMGIVMFIGLVLVGGFISARIYYGAFLSSSTQIVLRAYLQDRQIEEAKKDAAFLE RSLTVSTPS
Sequences:
>Translated_329_residues MDTSGNTLELCIDIQQKVDQSVTSMYQDWLAEVKNRSIFFKLYAIIYTIVSLGIIFSLSRNMNWQEINYPIIFTLIILSI LAIPFYNLIIYLKKRFNLGSISILILIKVYFICSLFSIYIILHKYGEFNIITNLANSILYSLFFTFFAWIMFGHIVNRTF FVIFLELPYSESQWIPSFEAIQIQLVQTLKDTFDKQPLSKLTNALELLHQRRESRIHHTTILSFAVAVLALLGIVISMNP SIFTQIDKFLLLFSITKQPTSGMSMTMGIVMFIGLVLVGGFISARIYYGAFLSSSTQIVLRAYLQDRQIEEAKKDAAFLE RSLTVSTPS >Mature_329_residues MDTSGNTLELCIDIQQKVDQSVTSMYQDWLAEVKNRSIFFKLYAIIYTIVSLGIIFSLSRNMNWQEINYPIIFTLIILSI LAIPFYNLIIYLKKRFNLGSISILILIKVYFICSLFSIYIILHKYGEFNIITNLANSILYSLFFTFFAWIMFGHIVNRTF FVIFLELPYSESQWIPSFEAIQIQLVQTLKDTFDKQPLSKLTNALELLHQRRESRIHHTTILSFAVAVLALLGIVISMNP SIFTQIDKFLLLFSITKQPTSGMSMTMGIVMFIGLVLVGGFISARIYYGAFLSSSTQIVLRAYLQDRQIEEAKKDAAFLE RSLTVSTPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37790; Mature: 37790
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTSGNTLELCIDIQQKVDQSVTSMYQDWLAEVKNRSIFFKLYAIIYTIVSLGIIFSLSR CCCCCCEEEHEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC NMNWQEINYPIIFTLIILSILAIPFYNLIIYLKKRFNLGSISILILIKVYFICSLFSIYI CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ILHKYGEFNIITNLANSILYSLFFTFFAWIMFGHIVNRTFFVIFLELPYSESQWIPSFEA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHH IQIQLVQTLKDTFDKQPLSKLTNALELLHQRRESRIHHTTILSFAVAVLALLGIVISMNP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SIFTQIDKFLLLFSITKQPTSGMSMTMGIVMFIGLVLVGGFISARIYYGAFLSSSTQIVL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RAYLQDRQIEEAKKDAAFLERSLTVSTPS HHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDTSGNTLELCIDIQQKVDQSVTSMYQDWLAEVKNRSIFFKLYAIIYTIVSLGIIFSLSR CCCCCCEEEHEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC NMNWQEINYPIIFTLIILSILAIPFYNLIIYLKKRFNLGSISILILIKVYFICSLFSIYI CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ILHKYGEFNIITNLANSILYSLFFTFFAWIMFGHIVNRTFFVIFLELPYSESQWIPSFEA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHH IQIQLVQTLKDTFDKQPLSKLTNALELLHQRRESRIHHTTILSFAVAVLALLGIVISMNP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SIFTQIDKFLLLFSITKQPTSGMSMTMGIVMFIGLVLVGGFISARIYYGAFLSSSTQIVL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RAYLQDRQIEEAKKDAAFLERSLTVSTPS HHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA