| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897169
Identifier: 159897169
GI number: 159897169
Start: 739101
End: 739961
Strand: Reverse
Name: 159897169
Synonym: Haur_0640
Alternate gene names: NA
Gene position: 739961-739101 (Counterclockwise)
Preceding gene: 159897173
Following gene: 159897168
Centisome position: 11.66
GC content: 29.62
Gene sequence:
>861_bases ATGAAAGTAAATAATTTACTATCATCTGTTGCAGGTATATCCTATAAATCAATATCTGGATATACATTTGAGAAATATGG AGCTATAATGACAACTTCACCTGAAGTACAAGCTGCTTTAATTGCTGGGATTGTAGCTGTTTTTGGTACCATTATAACAA TGATAATAGCAAAAAGAACGTTTAAGTCAGATAAAGAAAAGATAATGATTGAACAACAAAAACTTGATAATGATCGTAAA AGAATGGATGCAGAAATAGCAAAGCTCAATATAGAAACGGAAAAAACTATAATCGATGCCTATGATATTAGAAATTTACA ATCTGCTGAGGTTTCTAAGCTAATAGCAGAAACAAAAAAAACTTTATATGAGATGAATCACATTAAAAATACTCAAATTA TTAATGATGCAGAAAAAATAAGAAATTTATTAATTCTATTTGACAGAAAAGCTTTTAATAAACTTGTCTCATCTGAAGAT CCTTTGTTATTATTGCGAGCTATTATAGAAACTCGTATCAATATGCAAAAAATGGGTGCTTCTTTTATATACGATATAGA AGTATCGAATGCTTTTAATAACATAAAGAATATTTTGATTCATTTAGAAGATTGGGTTTCTCAAAATATTCCAAAACTTA ATGAGCTCGCAGAAGATATAGAAATTCGCAAATACCATGGTGTATCCCCCGATACATTTAAAGGAATCAACCCATATGAA TTTGTAGATAAAGTTATCTCTGCACGCTCTGATATAAATAGAAATCTTCATATAGTAGAAAAAAATTTTAGAGAGATAGA GCAGCAAACTAGAAATCAACCTGATGAACCTGTGAAACCCCTTGATGACCTTCCAAGCTAA
Upstream 100 bases:
>100_bases TAGAGATAGTATTCTTGGTGATTTTTTATGTTTATCGCGATGTTTTGGTCTTTTCTAGAAGGCTTCAGGAATTATTAGAC AGAATCTAGTAAAGTTTTGG
Downstream 100 bases:
>100_bases TTTTCAGTGTGTTAGGCTCTGTCCGATAATTTCGGAAGCCTTCAGATGAAGTATTAGAACACCATTATGGACATGAAAAT CACCAAGAATACTGCCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKVNNLLSSVAGISYKSISGYTFEKYGAIMTTSPEVQAALIAGIVAVFGTIITMIIAKRTFKSDKEKIMIEQQKLDNDRK RMDAEIAKLNIETEKTIIDAYDIRNLQSAEVSKLIAETKKTLYEMNHIKNTQIINDAEKIRNLLILFDRKAFNKLVSSED PLLLLRAIIETRINMQKMGASFIYDIEVSNAFNNIKNILIHLEDWVSQNIPKLNELAEDIEIRKYHGVSPDTFKGINPYE FVDKVISARSDINRNLHIVEKNFREIEQQTRNQPDEPVKPLDDLPS
Sequences:
>Translated_286_residues MKVNNLLSSVAGISYKSISGYTFEKYGAIMTTSPEVQAALIAGIVAVFGTIITMIIAKRTFKSDKEKIMIEQQKLDNDRK RMDAEIAKLNIETEKTIIDAYDIRNLQSAEVSKLIAETKKTLYEMNHIKNTQIINDAEKIRNLLILFDRKAFNKLVSSED PLLLLRAIIETRINMQKMGASFIYDIEVSNAFNNIKNILIHLEDWVSQNIPKLNELAEDIEIRKYHGVSPDTFKGINPYE FVDKVISARSDINRNLHIVEKNFREIEQQTRNQPDEPVKPLDDLPS >Mature_286_residues MKVNNLLSSVAGISYKSISGYTFEKYGAIMTTSPEVQAALIAGIVAVFGTIITMIIAKRTFKSDKEKIMIEQQKLDNDRK RMDAEIAKLNIETEKTIIDAYDIRNLQSAEVSKLIAETKKTLYEMNHIKNTQIINDAEKIRNLLILFDRKAFNKLVSSED PLLLLRAIIETRINMQKMGASFIYDIEVSNAFNNIKNILIHLEDWVSQNIPKLNELAEDIEIRKYHGVSPDTFKGINPYE FVDKVISARSDINRNLHIVEKNFREIEQQTRNQPDEPVKPLDDLPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32730; Mature: 32730
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVNNLLSSVAGISYKSISGYTFEKYGAIMTTSPEVQAALIAGIVAVFGTIITMIIAKRT CCHHHHHHHHHCCCCCCCCCCCHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH FKSDKEKIMIEQQKLDNDRKRMDAEIAKLNIETEKTIIDAYDIRNLQSAEVSKLIAETKK HCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH TLYEMNHIKNTQIINDAEKIRNLLILFDRKAFNKLVSSEDPLLLLRAIIETRINMQKMGA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC SFIYDIEVSNAFNNIKNILIHLEDWVSQNIPKLNELAEDIEIRKYHGVSPDTFKGINPYE EEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH FVDKVISARSDINRNLHIVEKNFREIEQQTRNQPDEPVKPLDDLPS HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKVNNLLSSVAGISYKSISGYTFEKYGAIMTTSPEVQAALIAGIVAVFGTIITMIIAKRT CCHHHHHHHHHCCCCCCCCCCCHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH FKSDKEKIMIEQQKLDNDRKRMDAEIAKLNIETEKTIIDAYDIRNLQSAEVSKLIAETKK HCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH TLYEMNHIKNTQIINDAEKIRNLLILFDRKAFNKLVSSEDPLLLLRAIIETRINMQKMGA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC SFIYDIEVSNAFNNIKNILIHLEDWVSQNIPKLNELAEDIEIRKYHGVSPDTFKGINPYE EEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH FVDKVISARSDINRNLHIVEKNFREIEQQTRNQPDEPVKPLDDLPS HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA