The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897169

Identifier: 159897169

GI number: 159897169

Start: 739101

End: 739961

Strand: Reverse

Name: 159897169

Synonym: Haur_0640

Alternate gene names: NA

Gene position: 739961-739101 (Counterclockwise)

Preceding gene: 159897173

Following gene: 159897168

Centisome position: 11.66

GC content: 29.62

Gene sequence:

>861_bases
ATGAAAGTAAATAATTTACTATCATCTGTTGCAGGTATATCCTATAAATCAATATCTGGATATACATTTGAGAAATATGG
AGCTATAATGACAACTTCACCTGAAGTACAAGCTGCTTTAATTGCTGGGATTGTAGCTGTTTTTGGTACCATTATAACAA
TGATAATAGCAAAAAGAACGTTTAAGTCAGATAAAGAAAAGATAATGATTGAACAACAAAAACTTGATAATGATCGTAAA
AGAATGGATGCAGAAATAGCAAAGCTCAATATAGAAACGGAAAAAACTATAATCGATGCCTATGATATTAGAAATTTACA
ATCTGCTGAGGTTTCTAAGCTAATAGCAGAAACAAAAAAAACTTTATATGAGATGAATCACATTAAAAATACTCAAATTA
TTAATGATGCAGAAAAAATAAGAAATTTATTAATTCTATTTGACAGAAAAGCTTTTAATAAACTTGTCTCATCTGAAGAT
CCTTTGTTATTATTGCGAGCTATTATAGAAACTCGTATCAATATGCAAAAAATGGGTGCTTCTTTTATATACGATATAGA
AGTATCGAATGCTTTTAATAACATAAAGAATATTTTGATTCATTTAGAAGATTGGGTTTCTCAAAATATTCCAAAACTTA
ATGAGCTCGCAGAAGATATAGAAATTCGCAAATACCATGGTGTATCCCCCGATACATTTAAAGGAATCAACCCATATGAA
TTTGTAGATAAAGTTATCTCTGCACGCTCTGATATAAATAGAAATCTTCATATAGTAGAAAAAAATTTTAGAGAGATAGA
GCAGCAAACTAGAAATCAACCTGATGAACCTGTGAAACCCCTTGATGACCTTCCAAGCTAA

Upstream 100 bases:

>100_bases
TAGAGATAGTATTCTTGGTGATTTTTTATGTTTATCGCGATGTTTTGGTCTTTTCTAGAAGGCTTCAGGAATTATTAGAC
AGAATCTAGTAAAGTTTTGG

Downstream 100 bases:

>100_bases
TTTTCAGTGTGTTAGGCTCTGTCCGATAATTTCGGAAGCCTTCAGATGAAGTATTAGAACACCATTATGGACATGAAAAT
CACCAAGAATACTGCCCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKVNNLLSSVAGISYKSISGYTFEKYGAIMTTSPEVQAALIAGIVAVFGTIITMIIAKRTFKSDKEKIMIEQQKLDNDRK
RMDAEIAKLNIETEKTIIDAYDIRNLQSAEVSKLIAETKKTLYEMNHIKNTQIINDAEKIRNLLILFDRKAFNKLVSSED
PLLLLRAIIETRINMQKMGASFIYDIEVSNAFNNIKNILIHLEDWVSQNIPKLNELAEDIEIRKYHGVSPDTFKGINPYE
FVDKVISARSDINRNLHIVEKNFREIEQQTRNQPDEPVKPLDDLPS

Sequences:

>Translated_286_residues
MKVNNLLSSVAGISYKSISGYTFEKYGAIMTTSPEVQAALIAGIVAVFGTIITMIIAKRTFKSDKEKIMIEQQKLDNDRK
RMDAEIAKLNIETEKTIIDAYDIRNLQSAEVSKLIAETKKTLYEMNHIKNTQIINDAEKIRNLLILFDRKAFNKLVSSED
PLLLLRAIIETRINMQKMGASFIYDIEVSNAFNNIKNILIHLEDWVSQNIPKLNELAEDIEIRKYHGVSPDTFKGINPYE
FVDKVISARSDINRNLHIVEKNFREIEQQTRNQPDEPVKPLDDLPS
>Mature_286_residues
MKVNNLLSSVAGISYKSISGYTFEKYGAIMTTSPEVQAALIAGIVAVFGTIITMIIAKRTFKSDKEKIMIEQQKLDNDRK
RMDAEIAKLNIETEKTIIDAYDIRNLQSAEVSKLIAETKKTLYEMNHIKNTQIINDAEKIRNLLILFDRKAFNKLVSSED
PLLLLRAIIETRINMQKMGASFIYDIEVSNAFNNIKNILIHLEDWVSQNIPKLNELAEDIEIRKYHGVSPDTFKGINPYE
FVDKVISARSDINRNLHIVEKNFREIEQQTRNQPDEPVKPLDDLPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32730; Mature: 32730

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNNLLSSVAGISYKSISGYTFEKYGAIMTTSPEVQAALIAGIVAVFGTIITMIIAKRT
CCHHHHHHHHHCCCCCCCCCCCHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKSDKEKIMIEQQKLDNDRKRMDAEIAKLNIETEKTIIDAYDIRNLQSAEVSKLIAETKK
HCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TLYEMNHIKNTQIINDAEKIRNLLILFDRKAFNKLVSSEDPLLLLRAIIETRINMQKMGA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
SFIYDIEVSNAFNNIKNILIHLEDWVSQNIPKLNELAEDIEIRKYHGVSPDTFKGINPYE
EEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
FVDKVISARSDINRNLHIVEKNFREIEQQTRNQPDEPVKPLDDLPS
HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKVNNLLSSVAGISYKSISGYTFEKYGAIMTTSPEVQAALIAGIVAVFGTIITMIIAKRT
CCHHHHHHHHHCCCCCCCCCCCHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKSDKEKIMIEQQKLDNDRKRMDAEIAKLNIETEKTIIDAYDIRNLQSAEVSKLIAETKK
HCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TLYEMNHIKNTQIINDAEKIRNLLILFDRKAFNKLVSSEDPLLLLRAIIETRINMQKMGA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
SFIYDIEVSNAFNNIKNILIHLEDWVSQNIPKLNELAEDIEIRKYHGVSPDTFKGINPYE
EEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
FVDKVISARSDINRNLHIVEKNFREIEQQTRNQPDEPVKPLDDLPS
HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA