| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897165
Identifier: 159897165
GI number: 159897165
Start: 733732
End: 734901
Strand: Reverse
Name: 159897165
Synonym: Haur_0636
Alternate gene names: NA
Gene position: 734901-733732 (Counterclockwise)
Preceding gene: 159897168
Following gene: 159897164
Centisome position: 11.58
GC content: 51.37
Gene sequence:
>1170_bases ATGCAACCTGCAAGCCTCAGTGTACTAACCCCCACTCCAGTGTATCCAGCCCATGCTGGTTCAAAAAACTATAGTTTGAA TGCCGTACAGCAATTAAGTCATTATTATACTGTCGATAGTTATTGTTTAGCCACCCAACCTGAAGCCGTCGATTGGGGGC CATTGCCGCAATGGTGTCGTGATCTACGGGCGTTTACCCCAACCAAGCCAGCGCGAAAAGGCATCGATCCACCAGCGGTG CATTTGGAATTTTCGCAACCCATGTGCGATTATTTACAACAACGCTGGATGCGCAATCTGCCTGATTTGTTGCAACTTGA AGGCACAACCATGGCTCAGTATGCGCCATTTGCCCGCCGTTTGGGGCTAAAAGCAATTATCTGTACCATACATCAAGTTG GGTTTGTGGCACAATGGCGACGTTTACAACGTGAACACCATTGGAAACTACGTGCCCGCCGCTTAGCTGGTTTACTCAGC TTATGGCTATATGAGCAGCGAGCCTTGCGCCAGTGCGATTTGCTGGTTACCTTGAGCACAACCGATCAACAAACCTTGAA TCGTTGGCAACCAAAACTCAACGTTGTCACTGTGCCAGCAGGGGTTGATTTAAGCCAATGGCCATTATGTCGCCAGTCCC AAGCACCACAGCAGGTGCTGTTTGTCGGTAACTATTTTCACCCGCCAAATGTTGAAGGAGCCTTGTGGTTAGCACGGGAG GTTTGGCCATTGGTGCAAGCTCAACTGCCTGAAGCACGCTTGATGCTAGCAGGGCGCAGCCCAACCCCTGAAATTCAACA ACTTGCGAGTGCTACAATTCAAGTGCCTGGCACAATTGATGATTTACAGGCCGTGTATCGGCAAAGCCAGGTGGTGGCAG CGCCAATTTTTTGGGGCAGCGGCGTGCGCATCAAAATTTTAGAGGGCTTGGCGACAGGCTTGCCCTTAGTCACCACAACG TTGGCGGCTGAAGGCTTGCCGCTGAAACACGAAGAGCATGCGCTGTTTGCCGAAACGCCGCAAACCTTTGCCGCAGCGCT TGTGCGCATTTTGAACTCGCCACGTTTGGCCGAACAACTCGGCGAAGCAGGCCGGCAATTGATCGCCCAACAGTATGATT GGCAGGCAATTGGGCGACAATTAGCCCAGCACTATCAGAAGTTACGCTAA
Upstream 100 bases:
>100_bases GATGGTGCAATATTTAACGTCGTGAATCAATATTCGCTGCTGATTGTGATTCGTCTGCTATACTTGGGCCAGTGGTTCTC TAGCTTCGGTAGGTCAATTG
Downstream 100 bases:
>100_bases CAAGGAGCTTGCACATGGAAATGGATCATGTAGCGGTTGTGGTCAATAATATTGCCGAATCGACTGCTTGGTATGTTGCG CAATGTGGGGCGCAGGTGTT
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: ORF9 [H]
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MQPASLSVLTPTPVYPAHAGSKNYSLNAVQQLSHYYTVDSYCLATQPEAVDWGPLPQWCRDLRAFTPTKPARKGIDPPAV HLEFSQPMCDYLQQRWMRNLPDLLQLEGTTMAQYAPFARRLGLKAIICTIHQVGFVAQWRRLQREHHWKLRARRLAGLLS LWLYEQRALRQCDLLVTLSTTDQQTLNRWQPKLNVVTVPAGVDLSQWPLCRQSQAPQQVLFVGNYFHPPNVEGALWLARE VWPLVQAQLPEARLMLAGRSPTPEIQQLASATIQVPGTIDDLQAVYRQSQVVAAPIFWGSGVRIKILEGLATGLPLVTTT LAAEGLPLKHEEHALFAETPQTFAAALVRILNSPRLAEQLGEAGRQLIAQQYDWQAIGRQLAQHYQKLR
Sequences:
>Translated_389_residues MQPASLSVLTPTPVYPAHAGSKNYSLNAVQQLSHYYTVDSYCLATQPEAVDWGPLPQWCRDLRAFTPTKPARKGIDPPAV HLEFSQPMCDYLQQRWMRNLPDLLQLEGTTMAQYAPFARRLGLKAIICTIHQVGFVAQWRRLQREHHWKLRARRLAGLLS LWLYEQRALRQCDLLVTLSTTDQQTLNRWQPKLNVVTVPAGVDLSQWPLCRQSQAPQQVLFVGNYFHPPNVEGALWLARE VWPLVQAQLPEARLMLAGRSPTPEIQQLASATIQVPGTIDDLQAVYRQSQVVAAPIFWGSGVRIKILEGLATGLPLVTTT LAAEGLPLKHEEHALFAETPQTFAAALVRILNSPRLAEQLGEAGRQLIAQQYDWQAIGRQLAQHYQKLR >Mature_389_residues MQPASLSVLTPTPVYPAHAGSKNYSLNAVQQLSHYYTVDSYCLATQPEAVDWGPLPQWCRDLRAFTPTKPARKGIDPPAV HLEFSQPMCDYLQQRWMRNLPDLLQLEGTTMAQYAPFARRLGLKAIICTIHQVGFVAQWRRLQREHHWKLRARRLAGLLS LWLYEQRALRQCDLLVTLSTTDQQTLNRWQPKLNVVTVPAGVDLSQWPLCRQSQAPQQVLFVGNYFHPPNVEGALWLARE VWPLVQAQLPEARLMLAGRSPTPEIQQLASATIQVPGTIDDLQAVYRQSQVVAAPIFWGSGVRIKILEGLATGLPLVTTT LAAEGLPLKHEEHALFAETPQTFAAALVRILNSPRLAEQLGEAGRQLIAQQYDWQAIGRQLAQHYQKLR
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43856; Mature: 43856
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPASLSVLTPTPVYPAHAGSKNYSLNAVQQLSHYYTVDSYCLATQPEAVDWGPLPQWCR CCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHH DLRAFTPTKPARKGIDPPAVHLEFSQPMCDYLQQRWMRNLPDLLQLEGTTMAQYAPFARR HHHCCCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHH LGLKAIICTIHQVGFVAQWRRLQREHHWKLRARRLAGLLSLWLYEQRALRQCDLLVTLST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC TDQQTLNRWQPKLNVVTVPAGVDLSQWPLCRQSQAPQQVLFVGNYFHPPNVEGALWLARE CCHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH VWPLVQAQLPEARLMLAGRSPTPEIQQLASATIQVPGTIDDLQAVYRQSQVVAAPIFWGS HHHHHHHHCCCHHEEEECCCCCHHHHHHHHCEEECCCCHHHHHHHHHHCCEEEEEEEECC GVRIKILEGLATGLPLVTTTLAAEGLPLKHEEHALFAETPQTFAAALVRILNSPRLAEQL CCEEEEEHHHHCCCHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHH GEAGRQLIAQQYDWQAIGRQLAQHYQKLR HHHHHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MQPASLSVLTPTPVYPAHAGSKNYSLNAVQQLSHYYTVDSYCLATQPEAVDWGPLPQWCR CCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHH DLRAFTPTKPARKGIDPPAVHLEFSQPMCDYLQQRWMRNLPDLLQLEGTTMAQYAPFARR HHHCCCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHH LGLKAIICTIHQVGFVAQWRRLQREHHWKLRARRLAGLLSLWLYEQRALRQCDLLVTLST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC TDQQTLNRWQPKLNVVTVPAGVDLSQWPLCRQSQAPQQVLFVGNYFHPPNVEGALWLARE CCHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH VWPLVQAQLPEARLMLAGRSPTPEIQQLASATIQVPGTIDDLQAVYRQSQVVAAPIFWGS HHHHHHHHCCCHHEEEECCCCCHHHHHHHHCEEECCCCHHHHHHHHHHCCEEEEEEEECC GVRIKILEGLATGLPLVTTTLAAEGLPLKHEEHALFAETPQTFAAALVRILNSPRLAEQL CCEEEEEHHHHCCCHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHH GEAGRQLIAQQYDWQAIGRQLAQHYQKLR HHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7896702 [H]