| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897099
Identifier: 159897099
GI number: 159897099
Start: 658100
End: 658894
Strand: Reverse
Name: 159897099
Synonym: Haur_0570
Alternate gene names: NA
Gene position: 658894-658100 (Counterclockwise)
Preceding gene: 159897100
Following gene: 159897098
Centisome position: 10.38
GC content: 48.18
Gene sequence:
>795_bases ATGTTAGAGCAACATAACCGCCAATCCATTAAATCGTTGATCATCTTTGGTAGCGGGCTGGCCTATGTTCTATCCATTGT CATGATGGAAGTGCTAGTAGGCTTCGCCTTGGGCGATATTAGCGAATCGCCCTTGATGCAAGCCCTCGTCGGCATTGGGA TTTTGGGAACCTTCATTAGTGCCTGCTTGATTCCACTCGCATTGCACTATTGGTTAGCGCCTGGCACTCAATTCATTGTG GGTATCCTGTTTTGGCTGGTTGATGTTGCGGTGCTGGCAATCAATGCTACCACCAGCTATCAGCTTATTAAGAAGCTTGA GCTATCTAGCTTTTTCACCATGTGGCAATTAGCGATCCCCTTCATTGGCCCAGCTATCACGATTATCGGCTGGGGCTTGG TCTATCTGGCCGATGATGGACAAAAGGATCGGCAGTCGGATCGGTTGCTTGAAACCTCAAAACGGGCTTTGATGCGTGAG GCGGAGTATGCGCGAGTGAGTGCCGAGCATGAATTTGCGATGAAGCAAATTGCCCAAGTCAAGCAATCGCTGATGATGGC ATTACAGGCGAGCGATATTGCCAAGGTTGCCGAGCAGGGGGCATACAATTCAGCACTTCAAATTACCCGCCAAATCGTCG GCCTGCCATTGAATGGTTCAAACCATGATCAAACCGAGTCACTTCATAGCCAAACCCATGATCACATTGAACCACAGCAG GAACTACCTTTTGATACCACGCCCATTATTTATACCAACAACGAAGGGTATGCTGATCAACCAAAAAACGATTAG
Upstream 100 bases:
>100_bases GGTGGGCAGCCAACCACCAACCCGTAACTTCACCATGCCCCAAATATGGACTGCGTATCGAACCCCACTGGTCAGAAACG TAGCATATTAGGGGCATTCT
Downstream 100 bases:
>100_bases CGCCAACGATTGATACCGATGTGGTGCAGCCTGACACCAGCTGCATCACACCCCAATCGTTGGCCGATCTCCCACTGACA CTAGCCAATGAATCGGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MLEQHNRQSIKSLIIFGSGLAYVLSIVMMEVLVGFALGDISESPLMQALVGIGILGTFISACLIPLALHYWLAPGTQFIV GILFWLVDVAVLAINATTSYQLIKKLELSSFFTMWQLAIPFIGPAITIIGWGLVYLADDGQKDRQSDRLLETSKRALMRE AEYARVSAEHEFAMKQIAQVKQSLMMALQASDIAKVAEQGAYNSALQITRQIVGLPLNGSNHDQTESLHSQTHDHIEPQQ ELPFDTTPIIYTNNEGYADQPKND
Sequences:
>Translated_264_residues MLEQHNRQSIKSLIIFGSGLAYVLSIVMMEVLVGFALGDISESPLMQALVGIGILGTFISACLIPLALHYWLAPGTQFIV GILFWLVDVAVLAINATTSYQLIKKLELSSFFTMWQLAIPFIGPAITIIGWGLVYLADDGQKDRQSDRLLETSKRALMRE AEYARVSAEHEFAMKQIAQVKQSLMMALQASDIAKVAEQGAYNSALQITRQIVGLPLNGSNHDQTESLHSQTHDHIEPQQ ELPFDTTPIIYTNNEGYADQPKND >Mature_264_residues MLEQHNRQSIKSLIIFGSGLAYVLSIVMMEVLVGFALGDISESPLMQALVGIGILGTFISACLIPLALHYWLAPGTQFIV GILFWLVDVAVLAINATTSYQLIKKLELSSFFTMWQLAIPFIGPAITIIGWGLVYLADDGQKDRQSDRLLETSKRALMRE AEYARVSAEHEFAMKQIAQVKQSLMMALQASDIAKVAEQGAYNSALQITRQIVGLPLNGSNHDQTESLHSQTHDHIEPQQ ELPFDTTPIIYTNNEGYADQPKND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29220; Mature: 29220
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEQHNRQSIKSLIIFGSGLAYVLSIVMMEVLVGFALGDISESPLMQALVGIGILGTFIS CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ACLIPLALHYWLAPGTQFIVGILFWLVDVAVLAINATTSYQLIKKLELSSFFTMWQLAIP HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH FIGPAITIIGWGLVYLADDGQKDRQSDRLLETSKRALMREAEYARVSAEHEFAMKQIAQV HHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQSLMMALQASDIAKVAEQGAYNSALQITRQIVGLPLNGSNHDQTESLHSQTHDHIEPQQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHH ELPFDTTPIIYTNNEGYADQPKND CCCCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure MLEQHNRQSIKSLIIFGSGLAYVLSIVMMEVLVGFALGDISESPLMQALVGIGILGTFIS CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ACLIPLALHYWLAPGTQFIVGILFWLVDVAVLAINATTSYQLIKKLELSSFFTMWQLAIP HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH FIGPAITIIGWGLVYLADDGQKDRQSDRLLETSKRALMREAEYARVSAEHEFAMKQIAQV HHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQSLMMALQASDIAKVAEQGAYNSALQITRQIVGLPLNGSNHDQTESLHSQTHDHIEPQQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHH ELPFDTTPIIYTNNEGYADQPKND CCCCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA