| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897098
Identifier: 159897098
GI number: 159897098
Start: 657585
End: 658079
Strand: Reverse
Name: 159897098
Synonym: Haur_0569
Alternate gene names: NA
Gene position: 658079-657585 (Counterclockwise)
Preceding gene: 159897099
Following gene: 159897097
Centisome position: 10.37
GC content: 50.91
Gene sequence:
>495_bases GTGGTGCAGCCTGACACCAGCTGCATCACACCCCAATCGTTGGCCGATCTCCCACTGACACTAGCCAATGAATCGGCTGA CACTAATGATTTTGCAACTGACACCAATGATTTTGAACAATTACCGCTGCTCTTCGATGAATTCAACATTTTGGAGTGGC GCAGAGAAATCAAAGAACGGGGCAAGTATTGGCAGTGGCGCAAAGGCAGCGGGGATTATCGACCATCGCGGTATGGTGGC ACCTTTGACCAGCTTGATGATGAACGGAAGGCCCAATATGCCGTCAACAAACACATCTACGGACGAAACCGAGCAGCCCA AACCCAAGCCCAAGAAAAAGAAAGTGACACCAACCAACCAAACCAATCAGCGGTACAAACCAGTGACACCAACCGAAGCG CTGGAGATGTTGCGCAGCGCGATCGTCTATTGCCAGATCAGCGGCGTACCATTGAAGTTCAACCAGAATCAAGCCGGATT ACGCCTTCAGCTTGA
Upstream 100 bases:
>100_bases AGCAGGAACTACCTTTTGATACCACGCCCATTATTTATACCAACAACGAAGGGTATGCTGATCAACCAAAAAACGATTAG CGCCAACGATTGATACCGAT
Downstream 100 bases:
>100_bases TAATGTGTTTTTAGATGGCGTTCGGTTTGTTCATCGACCAATGACACTAGCCAATCCTACAGTGACACCAGTTTCACCAC TACAAAAAGGGAACTGACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MVQPDTSCITPQSLADLPLTLANESADTNDFATDTNDFEQLPLLFDEFNILEWRREIKERGKYWQWRKGSGDYRPSRYGG TFDQLDDERKAQYAVNKHIYGRNRAAQTQAQEKESDTNQPNQSAVQTSDTNRSAGDVAQRDRLLPDQRRTIEVQPESSRI TPSA
Sequences:
>Translated_164_residues MVQPDTSCITPQSLADLPLTLANESADTNDFATDTNDFEQLPLLFDEFNILEWRREIKERGKYWQWRKGSGDYRPSRYGG TFDQLDDERKAQYAVNKHIYGRNRAAQTQAQEKESDTNQPNQSAVQTSDTNRSAGDVAQRDRLLPDQRRTIEVQPESSRI TPSA >Mature_164_residues MVQPDTSCITPQSLADLPLTLANESADTNDFATDTNDFEQLPLLFDEFNILEWRREIKERGKYWQWRKGSGDYRPSRYGG TFDQLDDERKAQYAVNKHIYGRNRAAQTQAQEKESDTNQPNQSAVQTSDTNRSAGDVAQRDRLLPDQRRTIEVQPESSRI TPSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18799; Mature: 18799
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQPDTSCITPQSLADLPLTLANESADTNDFATDTNDFEQLPLLFDEFNILEWRREIKER CCCCCCCCCCCHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GKYWQWRKGSGDYRPSRYGGTFDQLDDERKAQYAVNKHIYGRNRAAQTQAQEKESDTNQP CCEEEEECCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC NQSAVQTSDTNRSAGDVAQRDRLLPDQRRTIEVQPESSRITPSA CCHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MVQPDTSCITPQSLADLPLTLANESADTNDFATDTNDFEQLPLLFDEFNILEWRREIKER CCCCCCCCCCCHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GKYWQWRKGSGDYRPSRYGGTFDQLDDERKAQYAVNKHIYGRNRAAQTQAQEKESDTNQP CCEEEEECCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC NQSAVQTSDTNRSAGDVAQRDRLLPDQRRTIEVQPESSRITPSA CCHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA