Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897097

Identifier: 159897097

GI number: 159897097

Start: 657213

End: 657455

Strand: Reverse

Name: 159897097

Synonym: Haur_0568

Alternate gene names: NA

Gene position: 657455-657213 (Counterclockwise)

Preceding gene: 159897098

Following gene: 159897096

Centisome position: 10.36

GC content: 45.27

Gene sequence:

>243_bases
ATGTGGGATATGTGGGATATGTGGGATAAAGTCATGAAATTTCAAATCTTTTATTGTTCCCACTGTGGTACGCCGTTGGG
TTTCATTCCGCATGATGGTTTTGCATTAATCTGTGGGATTGCCTGCATCACAACCACAACCCCAATCACCTGTGGCGCAT
GCAAGAACCAAACGATTTGGTATGCGCCAAAACGGCAGCGACGCAAAAAACAACGACTAGGGATCGTTAGGCAAACTACT
TGA

Upstream 100 bases:

>100_bases
TTCATCGACCAATGACACTAGCCAATCCTACAGTGACACCAGTTTCACCACTACAAAAAGGGAACTGACACCAAATTCCG
AAATTTTCGGAATTTGAAAA

Downstream 100 bases:

>100_bases
CGATTGAAAACAAGTGTGCTAAATTCTTGATACATTTGCATATCCGTTCGTGATGGCTGGCTTGATGATTGTCGCTGGTA
TCACGCTCACGAAGAAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MWDMWDMWDKVMKFQIFYCSHCGTPLGFIPHDGFALICGIACITTTTPITCGACKNQTIWYAPKRQRRKKQRLGIVRQTT

Sequences:

>Translated_80_residues
MWDMWDMWDKVMKFQIFYCSHCGTPLGFIPHDGFALICGIACITTTTPITCGACKNQTIWYAPKRQRRKKQRLGIVRQTT
>Mature_80_residues
MWDMWDMWDKVMKFQIFYCSHCGTPLGFIPHDGFALICGIACITTTTPITCGACKNQTIWYAPKRQRRKKQRLGIVRQTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9316; Mature: 9316

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
12.5 %Cys+Met (Translated Protein)
7.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
12.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWDMWDMWDKVMKFQIFYCSHCGTPLGFIPHDGFALICGIACITTTTPITCGACKNQTIW
CCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCEEE
YAPKRQRRKKQRLGIVRQTT
ECCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MWDMWDMWDKVMKFQIFYCSHCGTPLGFIPHDGFALICGIACITTTTPITCGACKNQTIW
CCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCEEE
YAPKRQRRKKQRLGIVRQTT
ECCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA