| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897093
Identifier: 159897093
GI number: 159897093
Start: 653980
End: 655413
Strand: Reverse
Name: 159897093
Synonym: Haur_0564
Alternate gene names: NA
Gene position: 655413-653980 (Counterclockwise)
Preceding gene: 159897094
Following gene: 159897092
Centisome position: 10.33
GC content: 55.51
Gene sequence:
>1434_bases ATGTCGAAAGCTGTCGAATTGGCAAAGTGCCATGCCGACCCTGCCTACTTCACCCACAACTACGGACGAATAGACGACGC GCAGGGTCTTGGTGATGGCAGCGGCGATATGCCGTTTACGCTCTGGCCTGCGCAGATTGAAGTCCTGTGGACGCTTCTGC TTCAGCGTCTAATTCTGATCTTGAAGGCGCGGCAGTTGGGTATTAGCTGGTTGTGTTGTGCCTATGCCCTGTGGCTCTGC CTGTTCCAACCGGGCAAGGTGGTGCTGATCTTCAGTAAAGGTCAAGGCGAAGCGGACGAGATGCTTCATCGGGTCAAACG GTTGTATGAACGCTTACCCGATTGGATGCGCGAAGCCTCGCCAGCGCTGGTGACGGACAACACGACCGAACTGGAATGGG CGAATGGCAGTCGGGTTAAATCACTGCCCGCGACCAAAGGGGCAGGGCGTTCGTTCACTGCATCGCTCGTGATTTTGGAC GAAGCCGGATTCTTGATTTGGGCTAAGCAGTTGTATACCGCGCTCAAGCCCACGATTGACGGCGGCGGCCAACTGATTGT TCTCTCCACAGCCAACGGGATTGGCAATCTGTTTCATCAATTATGGGTCAAGGCACTCAGTGCCAAGAATCGGTTCAAAA CTATTTTTCTGCCATGGTGGGCGCGACCAACCCGTGATGCCCAGTGGTATCAAGAGCAGCTTGAGGAGTATACCGACCTT GATATGGTTCGGCAGGAATATCCCTCAACCGCGCAAGAAGCCTTTTTGGTGTCAGGGCGCACACGGTTCAAAATGCCGTG GTTGCTTCAGCAGACACCGAGTGACGGTTTAGCAGCGGAATCGTTACCCGATGCGCTGGACAAGCTTGACGGCGTAACGA TGTATCAATTGCCGCAACAAGGACGGCGCTACATTCTGGCAGCGGACGTAGCCGAAGGGCTGGAGCACGGCGACTTCTGC GCTGCCACCCTAATCGACGCAGTGTCATGGGAGGAAATGGTCAGCGTCCACGGCAAGTGGGAACCGGATGAATACGCTCG CATCTTGATGGCGTTGTCGGATGGGTACGGGGCCACGGTTGCGGTCGAACGGAACAATCACGGCCACGCGGTACTGACGA CGATGAAGCTGGCCGGATTCACGCGCATCGTGTATGGCCTTGATGGGCGAGCAGGCTGGCTGACCAACGCCCAGACCAAG CCACAAATGATTGACCTGTTAGCAACGGCACTGCGCGATGTGTTGGTAAAAATTCGCAATCAAACGGCGCTGAATGAACT AGCGATTTATCGGATTTTGAAGAACGGCGGGACAGGCGCACCCGCAGGCTATCACGATGATTTCGTGATGGCATGGGCCA TCGCTCTCATGGTTGCCAGTCAACCAACGGAAGTCGAAGACGAAGCCATTGCTGGCTCGTGGGATAGCTACTAA
Upstream 100 bases:
>100_bases ATCGCGCTGAGCATACGGGTAGGGGCGGTGCGCCAATTCCGATTGATAGTCCGGCGATGGCGCAAGCAGCTGATGAATTA AAACAGTGGCGTGAGGAACA
Downstream 100 bases:
>100_bases ACAAGGGGTATCGATGCCAACAGCCTTTGACAATTTGTCGGTTGAAGCCGCCAAAAAACGCTTGCCAACCACGCCGGAAG CGGTCAAAAGCGCGGTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MSKAVELAKCHADPAYFTHNYGRIDDAQGLGDGSGDMPFTLWPAQIEVLWTLLLQRLILILKARQLGISWLCCAYALWLC LFQPGKVVLIFSKGQGEADEMLHRVKRLYERLPDWMREASPALVTDNTTELEWANGSRVKSLPATKGAGRSFTASLVILD EAGFLIWAKQLYTALKPTIDGGGQLIVLSTANGIGNLFHQLWVKALSAKNRFKTIFLPWWARPTRDAQWYQEQLEEYTDL DMVRQEYPSTAQEAFLVSGRTRFKMPWLLQQTPSDGLAAESLPDALDKLDGVTMYQLPQQGRRYILAADVAEGLEHGDFC AATLIDAVSWEEMVSVHGKWEPDEYARILMALSDGYGATVAVERNNHGHAVLTTMKLAGFTRIVYGLDGRAGWLTNAQTK PQMIDLLATALRDVLVKIRNQTALNELAIYRILKNGGTGAPAGYHDDFVMAWAIALMVASQPTEVEDEAIAGSWDSY
Sequences:
>Translated_477_residues MSKAVELAKCHADPAYFTHNYGRIDDAQGLGDGSGDMPFTLWPAQIEVLWTLLLQRLILILKARQLGISWLCCAYALWLC LFQPGKVVLIFSKGQGEADEMLHRVKRLYERLPDWMREASPALVTDNTTELEWANGSRVKSLPATKGAGRSFTASLVILD EAGFLIWAKQLYTALKPTIDGGGQLIVLSTANGIGNLFHQLWVKALSAKNRFKTIFLPWWARPTRDAQWYQEQLEEYTDL DMVRQEYPSTAQEAFLVSGRTRFKMPWLLQQTPSDGLAAESLPDALDKLDGVTMYQLPQQGRRYILAADVAEGLEHGDFC AATLIDAVSWEEMVSVHGKWEPDEYARILMALSDGYGATVAVERNNHGHAVLTTMKLAGFTRIVYGLDGRAGWLTNAQTK PQMIDLLATALRDVLVKIRNQTALNELAIYRILKNGGTGAPAGYHDDFVMAWAIALMVASQPTEVEDEAIAGSWDSY >Mature_476_residues SKAVELAKCHADPAYFTHNYGRIDDAQGLGDGSGDMPFTLWPAQIEVLWTLLLQRLILILKARQLGISWLCCAYALWLCL FQPGKVVLIFSKGQGEADEMLHRVKRLYERLPDWMREASPALVTDNTTELEWANGSRVKSLPATKGAGRSFTASLVILDE AGFLIWAKQLYTALKPTIDGGGQLIVLSTANGIGNLFHQLWVKALSAKNRFKTIFLPWWARPTRDAQWYQEQLEEYTDLD MVRQEYPSTAQEAFLVSGRTRFKMPWLLQQTPSDGLAAESLPDALDKLDGVTMYQLPQQGRRYILAADVAEGLEHGDFCA ATLIDAVSWEEMVSVHGKWEPDEYARILMALSDGYGATVAVERNNHGHAVLTTMKLAGFTRIVYGLDGRAGWLTNAQTKP QMIDLLATALRDVLVKIRNQTALNELAIYRILKNGGTGAPAGYHDDFVMAWAIALMVASQPTEVEDEAIAGSWDSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53116; Mature: 52985
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00933 FGGY_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAVELAKCHADPAYFTHNYGRIDDAQGLGDGSGDMPFTLWPAQIEVLWTLLLQRLILI CCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHH LKARQLGISWLCCAYALWLCLFQPGKVVLIFSKGQGEADEMLHRVKRLYERLPDWMREAS HHHHHHCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC PALVTDNTTELEWANGSRVKSLPATKGAGRSFTASLVILDEAGFLIWAKQLYTALKPTID CCEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCC GGGQLIVLSTANGIGNLFHQLWVKALSAKNRFKTIFLPWWARPTRDAQWYQEQLEEYTDL CCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH DMVRQEYPSTAQEAFLVSGRTRFKMPWLLQQTPSDGLAAESLPDALDKLDGVTMYQLPQQ HHHHHHCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCC GRRYILAADVAEGLEHGDFCAATLIDAVSWEEMVSVHGKWEPDEYARILMALSDGYGATV CCEEEEEEHHHHCCCCCCHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEE AVERNNHGHAVLTTMKLAGFTRIVYGLDGRAGWLTNAQTKPQMIDLLATALRDVLVKIRN EEEECCCCCEEEEHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC QTALNELAIYRILKNGGTGAPAGYHDDFVMAWAIALMVASQPTEVEDEAIAGSWDSY HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure SKAVELAKCHADPAYFTHNYGRIDDAQGLGDGSGDMPFTLWPAQIEVLWTLLLQRLILI CCHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHH LKARQLGISWLCCAYALWLCLFQPGKVVLIFSKGQGEADEMLHRVKRLYERLPDWMREAS HHHHHHCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC PALVTDNTTELEWANGSRVKSLPATKGAGRSFTASLVILDEAGFLIWAKQLYTALKPTID CCEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCC GGGQLIVLSTANGIGNLFHQLWVKALSAKNRFKTIFLPWWARPTRDAQWYQEQLEEYTDL CCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH DMVRQEYPSTAQEAFLVSGRTRFKMPWLLQQTPSDGLAAESLPDALDKLDGVTMYQLPQQ HHHHHHCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCC GRRYILAADVAEGLEHGDFCAATLIDAVSWEEMVSVHGKWEPDEYARILMALSDGYGATV CCEEEEEEHHHHCCCCCCHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEE AVERNNHGHAVLTTMKLAGFTRIVYGLDGRAGWLTNAQTKPQMIDLLATALRDVLVKIRN EEEECCCCCEEEEHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC QTALNELAIYRILKNGGTGAPAGYHDDFVMAWAIALMVASQPTEVEDEAIAGSWDSY HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA