Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897092

Identifier: 159897092

GI number: 159897092

Start: 652395

End: 653966

Strand: Reverse

Name: 159897092

Synonym: Haur_0563

Alternate gene names: NA

Gene position: 653966-652395 (Counterclockwise)

Preceding gene: 159897093

Following gene: 159897091

Centisome position: 10.3

GC content: 57.19

Gene sequence:

>1572_bases
ATGCCAACAGCCTTTGACAATTTGTCGGTTGAAGCCGCCAAAAAACGCTTGCCAACCACGCCGGAAGCGGTCAAAAGCGC
GGTGCTGTTTCGCGATGGCGATCACTGGCAAGGTGGCGCGGCGTGGACTGGCCCCGCTCCAGCATCAACCGATAAGGGCG
CGACCGAGGTGATGACGCGTATTCAACGCGAGTTTGTTTCCAGCAATGTCATTGCCGAGGTGATTGAGCGGCATGCGAAT
GGTGCAGTCGGGCGGGAACCTCAATGGAGCTATGCCCTGCGTCGTCCATTACTGGAGGAGGAACAGCCGAATACCCAAGA
GCAAGCATTGCTCGATGAAGCGGAAGCCGCCATGACGAGCTGGTGGGATCAACGGAATGTGCTGGGTATCCTACAAGAAA
GCATTGCCACCGCCGTGGTGCATGGCCGCGCCGTCCTGCGGTTATTTGTGCCCCCTGCCGTTGTCGAAGGCGGCGTGATT
CAGCGCCAGCCCAGTTTGGCCGATGCCTTGAATCTCATTTGGTTGGATGGACTTTCACCCGAGCAGGCTGGCGTGAGCCG
CGACACGGCCACGATGCAGGCCTGTGGTGTGTATGTCTACACCAACGACGCGAAACAGGAAGTGGCTGAAGTGACCTTTC
TTGATGGCCTCGATACCGTGATGCGCACACTCGAAGGCGAAGCCGTTACCGGAGAAACGCGGCTGCCGCTCATGGGTCAC
TTACTGATGATCGAAATCACCTGCAAACCCTTGATCGGGTTACCGATGCAGCAAATGCAGAAGGCGCTCAATATGACGTT
GACGATGCTCCAACACAACATCGTGATTAGCGGATTTGTTGAGCGCGTGATGACCAATGCCCAAATGCCCTTTGATGAGG
TCGATGATCCAACCAACCCGGGCAAAAAAACGCGTGTGTATCGCCCGTATGACATCGGGCCGGGCAAAACCACCAATTTG
GTCGGGCTGCCGATGCGCGAAAAAGATGGACAGATTGAGCGCATCACGGGCTACACCACCCCATCGGTGCAATGGCGTGA
TCCCGTTCCCGTGGGCACGTTCATTGACACCGACGCAGCAATCTATAGCCGGATGCTCAAGGAGTGCAAGCAACTGCATG
CGCTGTTGAGTGGTGACGCAGTAGCGAGTGGCGAAAGTCGCAAACAAGCATTGTTGGATTTTGCGATGTCCCTAGGGCCA
ACAGCTACAGCGTTGAAGCAACTGGTGCGCTGGGTGCTCGAAGCGGCCTTAGCCTTAGCGGCCCACTTTGCGGGGCGTGC
CCAAGCCTTTGATTCCTTGCGGGCGGATGTCACGCCACGGTTGTGGCTGGGCAGCTTGAGCAGCGAGGAACGCAACTTCT
TATTAGCCGCCTACGAAAAAGGGGCGATCAGTCACGACCTGTTCTTGAGCTTAATAGAGGTTGAAGATGTGGATGCCGAG
AAAGCCCGCATTGCTGCCGAGCAGGAAGAAAAGCAGGCTCGCAGCGCCCGAAGCTTAGGTGCAGCCTTGGCGATGCAGCA
AGCACGGCTCGATAGTGGCGCTGCCAGCACCGGATTGGAGCAGCCGCAATGA

Upstream 100 bases:

>100_bases
ATGGCATGGGCCATCGCTCTCATGGTTGCCAGTCAACCAACGGAAGTCGAAGACGAAGCCATTGCTGGCTCGTGGGATAG
CTACTAAACAAGGGGTATCG

Downstream 100 bases:

>100_bases
TCGACGCGGTTGCCATTGCCAATCAATTCCGTGCTGAGCTTCAGGCCCAGAACGCGAGCGCGATGGACGATCTGACCAAA
CGCTGGCGCACGGTCGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 522

Protein sequence:

>523_residues
MPTAFDNLSVEAAKKRLPTTPEAVKSAVLFRDGDHWQGGAAWTGPAPASTDKGATEVMTRIQREFVSSNVIAEVIERHAN
GAVGREPQWSYALRRPLLEEEQPNTQEQALLDEAEAAMTSWWDQRNVLGILQESIATAVVHGRAVLRLFVPPAVVEGGVI
QRQPSLADALNLIWLDGLSPEQAGVSRDTATMQACGVYVYTNDAKQEVAEVTFLDGLDTVMRTLEGEAVTGETRLPLMGH
LLMIEITCKPLIGLPMQQMQKALNMTLTMLQHNIVISGFVERVMTNAQMPFDEVDDPTNPGKKTRVYRPYDIGPGKTTNL
VGLPMREKDGQIERITGYTTPSVQWRDPVPVGTFIDTDAAIYSRMLKECKQLHALLSGDAVASGESRKQALLDFAMSLGP
TATALKQLVRWVLEAALALAAHFAGRAQAFDSLRADVTPRLWLGSLSSEERNFLLAAYEKGAISHDLFLSLIEVEDVDAE
KARIAAEQEEKQARSARSLGAALAMQQARLDSGAASTGLEQPQ

Sequences:

>Translated_523_residues
MPTAFDNLSVEAAKKRLPTTPEAVKSAVLFRDGDHWQGGAAWTGPAPASTDKGATEVMTRIQREFVSSNVIAEVIERHAN
GAVGREPQWSYALRRPLLEEEQPNTQEQALLDEAEAAMTSWWDQRNVLGILQESIATAVVHGRAVLRLFVPPAVVEGGVI
QRQPSLADALNLIWLDGLSPEQAGVSRDTATMQACGVYVYTNDAKQEVAEVTFLDGLDTVMRTLEGEAVTGETRLPLMGH
LLMIEITCKPLIGLPMQQMQKALNMTLTMLQHNIVISGFVERVMTNAQMPFDEVDDPTNPGKKTRVYRPYDIGPGKTTNL
VGLPMREKDGQIERITGYTTPSVQWRDPVPVGTFIDTDAAIYSRMLKECKQLHALLSGDAVASGESRKQALLDFAMSLGP
TATALKQLVRWVLEAALALAAHFAGRAQAFDSLRADVTPRLWLGSLSSEERNFLLAAYEKGAISHDLFLSLIEVEDVDAE
KARIAAEQEEKQARSARSLGAALAMQQARLDSGAASTGLEQPQ
>Mature_522_residues
PTAFDNLSVEAAKKRLPTTPEAVKSAVLFRDGDHWQGGAAWTGPAPASTDKGATEVMTRIQREFVSSNVIAEVIERHANG
AVGREPQWSYALRRPLLEEEQPNTQEQALLDEAEAAMTSWWDQRNVLGILQESIATAVVHGRAVLRLFVPPAVVEGGVIQ
RQPSLADALNLIWLDGLSPEQAGVSRDTATMQACGVYVYTNDAKQEVAEVTFLDGLDTVMRTLEGEAVTGETRLPLMGHL
LMIEITCKPLIGLPMQQMQKALNMTLTMLQHNIVISGFVERVMTNAQMPFDEVDDPTNPGKKTRVYRPYDIGPGKTTNLV
GLPMREKDGQIERITGYTTPSVQWRDPVPVGTFIDTDAAIYSRMLKECKQLHALLSGDAVASGESRKQALLDFAMSLGPT
ATALKQLVRWVLEAALALAAHFAGRAQAFDSLRADVTPRLWLGSLSSEERNFLLAAYEKGAISHDLFLSLIEVEDVDAEK
ARIAAEQEEKQARSARSLGAALAMQQARLDSGAASTGLEQPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57081; Mature: 56949

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTAFDNLSVEAAKKRLPTTPEAVKSAVLFRDGDHWQGGAAWTGPAPASTDKGATEVMTR
CCCCCCCCCHHHHHHCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
IQREFVSSNVIAEVIERHANGAVGREPQWSYALRRPLLEEEQPNTQEQALLDEAEAAMTS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHH
WWDQRNVLGILQESIATAVVHGRAVLRLFVPPAVVEGGVIQRQPSLADALNLIWLDGLSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHEECCCCH
EQAGVSRDTATMQACGVYVYTNDAKQEVAEVTFLDGLDTVMRTLEGEAVTGETRLPLMGH
HHCCCCCCHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC
LLMIEITCKPLIGLPMQQMQKALNMTLTMLQHNIVISGFVERVMTNAQMPFDEVDDPTNP
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC
GKKTRVYRPYDIGPGKTTNLVGLPMREKDGQIERITGYTTPSVQWRDPVPVGTFIDTDAA
CCCCEEECCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCHHH
IYSRMLKECKQLHALLSGDAVASGESRKQALLDFAMSLGPTATALKQLVRWVLEAALALA
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AHFAGRAQAFDSLRADVTPRLWLGSLSSEERNFLLAAYEKGAISHDLFLSLIEVEDVDAE
HHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHH
KARIAAEQEEKQARSARSLGAALAMQQARLDSGAASTGLEQPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PTAFDNLSVEAAKKRLPTTPEAVKSAVLFRDGDHWQGGAAWTGPAPASTDKGATEVMTR
CCCCCCCCHHHHHHCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH
IQREFVSSNVIAEVIERHANGAVGREPQWSYALRRPLLEEEQPNTQEQALLDEAEAAMTS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHH
WWDQRNVLGILQESIATAVVHGRAVLRLFVPPAVVEGGVIQRQPSLADALNLIWLDGLSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHEECCCCH
EQAGVSRDTATMQACGVYVYTNDAKQEVAEVTFLDGLDTVMRTLEGEAVTGETRLPLMGH
HHCCCCCCHHHHHHCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC
LLMIEITCKPLIGLPMQQMQKALNMTLTMLQHNIVISGFVERVMTNAQMPFDEVDDPTNP
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC
GKKTRVYRPYDIGPGKTTNLVGLPMREKDGQIERITGYTTPSVQWRDPVPVGTFIDTDAA
CCCCEEECCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCHHH
IYSRMLKECKQLHALLSGDAVASGESRKQALLDFAMSLGPTATALKQLVRWVLEAALALA
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AHFAGRAQAFDSLRADVTPRLWLGSLSSEERNFLLAAYEKGAISHDLFLSLIEVEDVDAE
HHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHH
KARIAAEQEEKQARSARSLGAALAMQQARLDSGAASTGLEQPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA