Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897091

Identifier: 159897091

GI number: 159897091

Start: 651670

End: 652398

Strand: Reverse

Name: 159897091

Synonym: Haur_0562

Alternate gene names: NA

Gene position: 652398-651670 (Counterclockwise)

Preceding gene: 159897092

Following gene: 159897090

Centisome position: 10.28

GC content: 58.3

Gene sequence:

>729_bases
ATGATCGACGCGGTTGCCATTGCCAATCAATTCCGTGCTGAGCTTCAGGCCCAGAACGCGAGCGCGATGGACGATCTGAC
CAAACGCTGGCGCACGGTCGAAGCGGCCTTGAAGGCGGAAATGGAAGCCTTGGCGTTTCAAATGAGCCAGGCTAAGGCCG
ATGGGCAAACGGTCAGCGAGTCGCAGTTGTATGCGAACGAGCGCTACCAAGCGTTGTTGGTGCAGCTCCAGCGCGAACTG
GCGAAATACAACGCGGATGCCGCCGCGATCATTCAGGCACAGCAGTTGAGTTTTGCCAGTATGGGCGCGGAGCAGGCCAC
GGCGTGGTTGCGCTATTCCGGCGCGATTCAAGGGTCATTCACGCAGTTGAACAGCGGCGCATTTGAAAACATTGCCGCGC
TGGCACGGGCTGACAATCCCTTGGCGCTCTTGCTGAGTAACGCCTATCCGGAAACGGCGCAAGCCATGACCGATGCCCTG
TTGAGTGGCCTTGCATTGGGCAAAAACCCGCGCATCACGGCGCGAATGATGGTCAATGATGGCTTAGCAACCAGTCTCAA
TCATGCCTTGTTAGTAACCCGTGATCAGTCGATTCGAGCATCACGCGTGGCTGCGTTGCAGCAGTATCAAACGAGTGGCT
TAGCCGCCGCTTACATGCGCATCGCGGCACGCGGCGTACCTGTCTGGCCTGTTTGGCGCTCGATGGCACGGTCTATCCGA
CCAACGTGA

Upstream 100 bases:

>100_bases
AAAAGCAGGCTCGCAGCGCCCGAAGCTTAGGTGCAGCCTTGGCGATGCAGCAAGCACGGCTCGATAGTGGCGCTGCCAGC
ACCGGATTGGAGCAGCCGCA

Downstream 100 bases:

>100_bases
TGATGCCGTTGCATCCTCAGTGCAGATGTACATTACTGCCAATTTTAAGAGGCCGCGAGCCGCTGGCGATCCCAACGGGC
AAGCAATGGTTTCTGGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MIDAVAIANQFRAELQAQNASAMDDLTKRWRTVEAALKAEMEALAFQMSQAKADGQTVSESQLYANERYQALLVQLQREL
AKYNADAAAIIQAQQLSFASMGAEQATAWLRYSGAIQGSFTQLNSGAFENIAALARADNPLALLLSNAYPETAQAMTDAL
LSGLALGKNPRITARMMVNDGLATSLNHALLVTRDQSIRASRVAALQQYQTSGLAAAYMRIAARGVPVWPVWRSMARSIR
PT

Sequences:

>Translated_242_residues
MIDAVAIANQFRAELQAQNASAMDDLTKRWRTVEAALKAEMEALAFQMSQAKADGQTVSESQLYANERYQALLVQLQREL
AKYNADAAAIIQAQQLSFASMGAEQATAWLRYSGAIQGSFTQLNSGAFENIAALARADNPLALLLSNAYPETAQAMTDAL
LSGLALGKNPRITARMMVNDGLATSLNHALLVTRDQSIRASRVAALQQYQTSGLAAAYMRIAARGVPVWPVWRSMARSIR
PT
>Mature_242_residues
MIDAVAIANQFRAELQAQNASAMDDLTKRWRTVEAALKAEMEALAFQMSQAKADGQTVSESQLYANERYQALLVQLQREL
AKYNADAAAIIQAQQLSFASMGAEQATAWLRYSGAIQGSFTQLNSGAFENIAALARADNPLALLLSNAYPETAQAMTDAL
LSGLALGKNPRITARMMVNDGLATSLNHALLVTRDQSIRASRVAALQQYQTSGLAAAYMRIAARGVPVWPVWRSMARSIR
PT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26238; Mature: 26238

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDAVAIANQFRAELQAQNASAMDDLTKRWRTVEAALKAEMEALAFQMSQAKADGQTVSE
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
SQLYANERYQALLVQLQRELAKYNADAAAIIQAQQLSFASMGAEQATAWLRYSGAIQGSF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCH
TQLNSGAFENIAALARADNPLALLLSNAYPETAQAMTDALLSGLALGKNPRITARMMVND
HHHCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
GLATSLNHALLVTRDQSIRASRVAALQQYQTSGLAAAYMRIAARGVPVWPVWRSMARSIR
CCHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCC
PT
CC
>Mature Secondary Structure
MIDAVAIANQFRAELQAQNASAMDDLTKRWRTVEAALKAEMEALAFQMSQAKADGQTVSE
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
SQLYANERYQALLVQLQRELAKYNADAAAIIQAQQLSFASMGAEQATAWLRYSGAIQGSF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCH
TQLNSGAFENIAALARADNPLALLLSNAYPETAQAMTDALLSGLALGKNPRITARMMVND
HHHCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
GLATSLNHALLVTRDQSIRASRVAALQQYQTSGLAAAYMRIAARGVPVWPVWRSMARSIR
CCHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCC
PT
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA