Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897084

Identifier: 159897084

GI number: 159897084

Start: 647614

End: 648018

Strand: Reverse

Name: 159897084

Synonym: Haur_0555

Alternate gene names: NA

Gene position: 648018-647614 (Counterclockwise)

Preceding gene: 159897085

Following gene: 159897083

Centisome position: 10.21

GC content: 62.22

Gene sequence:

>405_bases
ATGTTACCGATGCGACCCACTGAATTCACGGTGATGCAGGCCACGCACACGGACGCGATGCGCGACCAATGTGTGCTCAT
GGAGCCACAGACCAGCGCAGGCCGCAATAACAAACCCGTGATCACCTACACCGACGCAGGGTCGTCGGCCTGTGGGTTCA
ATCCCAGCACGGCCAACGGCGTTGCCAGCGAGGAAGTTTTAGACAGCACGGCGGTCGTGATCACCAAGCCAACCCTGCGC
TTGCCTGCCGGAACCGTGATTCGTGCGTCATGGCGCGTGCGCATCACCCACCGCAATGGGCAGGTGCTTACCCCCGCGCT
AACGTTTGAGGTGGTGGGCGATCCGGCCACGCTTGGCACGGCCATCGTGGTGGAATTAGCGACCGTCACCCGCGAGGAGG
TCTAA

Upstream 100 bases:

>100_bases
GAAGCCGAGTTTGTCACCAATCAACCTGTTGTTGTCGAAGAAGCGCCCATGAGTGGCACGCTCGATACCTTTAGCCGCTG
GTAAGGAAGAAGGAAGCCGT

Downstream 100 bases:

>100_bases
TCATGGCCAAAAAAGGCGTAGCCCAGTACCAATCCTTTGCCAAGCGCTTTCGGGTGCGGATCGACGGCGCAACCCGCGAC
CTGTTGAATGAGGCGGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MLPMRPTEFTVMQATHTDAMRDQCVLMEPQTSAGRNNKPVITYTDAGSSACGFNPSTANGVASEEVLDSTAVVITKPTLR
LPAGTVIRASWRVRITHRNGQVLTPALTFEVVGDPATLGTAIVVELATVTREEV

Sequences:

>Translated_134_residues
MLPMRPTEFTVMQATHTDAMRDQCVLMEPQTSAGRNNKPVITYTDAGSSACGFNPSTANGVASEEVLDSTAVVITKPTLR
LPAGTVIRASWRVRITHRNGQVLTPALTFEVVGDPATLGTAIVVELATVTREEV
>Mature_134_residues
MLPMRPTEFTVMQATHTDAMRDQCVLMEPQTSAGRNNKPVITYTDAGSSACGFNPSTANGVASEEVLDSTAVVITKPTLR
LPAGTVIRASWRVRITHRNGQVLTPALTFEVVGDPATLGTAIVVELATVTREEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14326; Mature: 14326

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPMRPTEFTVMQATHTDAMRDQCVLMEPQTSAGRNNKPVITYTDAGSSACGFNPSTANG
CCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
VASEEVLDSTAVVITKPTLRLPAGTVIRASWRVRITHRNGQVLTPALTFEVVGDPATLGT
CCCHHHHCCEEEEEECCCEECCCCEEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCC
AIVVELATVTREEV
EEEEEHHHHHHCCC
>Mature Secondary Structure
MLPMRPTEFTVMQATHTDAMRDQCVLMEPQTSAGRNNKPVITYTDAGSSACGFNPSTANG
CCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
VASEEVLDSTAVVITKPTLRLPAGTVIRASWRVRITHRNGQVLTPALTFEVVGDPATLGT
CCCHHHHCCEEEEEECCCEECCCCEEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCC
AIVVELATVTREEV
EEEEEHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA