| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897085
Identifier: 159897085
GI number: 159897085
Start: 648035
End: 648427
Strand: Reverse
Name: 159897085
Synonym: Haur_0556
Alternate gene names: NA
Gene position: 648427-648035 (Counterclockwise)
Preceding gene: 159897086
Following gene: 159897084
Centisome position: 10.22
GC content: 54.45
Gene sequence:
>393_bases ATGGCACACACCGATGGCAGTATCAAAGCGGTGATGCAGGAAGAACTGCTGGAAACCGCGACCGTGCTTAACTGGACGGA TGTGAGCAACGCAGGCTACAACGCCGCCTTACGAAGAACCTTACGACGGTTGAATCTACCAAATGTCGCAGCATCAGCCA ATGATCCGCTCCTGGAAACCGTCGCCATCATTGAAGTGTGGCGCAGTGTGGTCAATGCGACCGTGACCGCGATTAATTTC GAAGCCGATGGCGGGAAATTTGACCGGAAGGCTATGCACGACCACGCCGTGCGCATGCTTAAGCAGCTCGAAGCCGAGTT TGTCACCAATCAACCTGTTGTTGTCGAAGAAGCGCCCATGAGTGGCACGCTCGATACCTTTAGCCGCTGGTAA
Upstream 100 bases:
>100_bases CTATGGCGATGCCGTCGCCGCCGATGATGCCACGTTGAGCGCCATCGATGGGATTGGCGAGGCCACAATCAAGAAATTGC GTGAGTACAAGGCGGCCTAA
Downstream 100 bases:
>100_bases GGAAGAAGGAAGCCGTATGTTACCGATGCGACCCACTGAATTCACGGTGATGCAGGCCACGCACACGGACGCGATGCGCG ACCAATGTGTGCTCATGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MAHTDGSIKAVMQEELLETATVLNWTDVSNAGYNAALRRTLRRLNLPNVAASANDPLLETVAIIEVWRSVVNATVTAINF EADGGKFDRKAMHDHAVRMLKQLEAEFVTNQPVVVEEAPMSGTLDTFSRW
Sequences:
>Translated_130_residues MAHTDGSIKAVMQEELLETATVLNWTDVSNAGYNAALRRTLRRLNLPNVAASANDPLLETVAIIEVWRSVVNATVTAINF EADGGKFDRKAMHDHAVRMLKQLEAEFVTNQPVVVEEAPMSGTLDTFSRW >Mature_129_residues AHTDGSIKAVMQEELLETATVLNWTDVSNAGYNAALRRTLRRLNLPNVAASANDPLLETVAIIEVWRSVVNATVTAINFE ADGGKFDRKAMHDHAVRMLKQLEAEFVTNQPVVVEEAPMSGTLDTFSRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14381; Mature: 14250
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHTDGSIKAVMQEELLETATVLNWTDVSNAGYNAALRRTLRRLNLPNVAASANDPLLET CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHH VAIIEVWRSVVNATVTAINFEADGGKFDRKAMHDHAVRMLKQLEAEFVTNQPVVVEEAPM HHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC SGTLDTFSRW CCCHHHHCCC >Mature Secondary Structure AHTDGSIKAVMQEELLETATVLNWTDVSNAGYNAALRRTLRRLNLPNVAASANDPLLET CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHH VAIIEVWRSVVNATVTAINFEADGGKFDRKAMHDHAVRMLKQLEAEFVTNQPVVVEEAPM HHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC SGTLDTFSRW CCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA