Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897077

Identifier: 159897077

GI number: 159897077

Start: 639592

End: 640968

Strand: Reverse

Name: 159897077

Synonym: Haur_0548

Alternate gene names: NA

Gene position: 640968-639592 (Counterclockwise)

Preceding gene: 159897078

Following gene: 159897076

Centisome position: 10.1

GC content: 57.08

Gene sequence:

>1377_bases
ATGACAACAATGCAACTACTCCGCAATGGCAGCGTCGTGATTGACTTCATGCCTGCTGGCGTAAACCCAACCGAAGGAAC
CACCTGCTATTGGCTTGTCGATGGCTCGTGGCAGCCACAGGTTCCACAGCGCGACCGCCGTTTGATCTCCAATGGCGAAC
AGTTTCAACCCAGCGTGCAATCGTTTGCCGTGAATATCTTTGGTGGCACGAATGAAGATCAGGCGTGGGCCGCCTACCAC
GCGCTGATGGTGTTACTCGACGATGCCGAGCGCTTTTACGAGGAAGGCTATAGCAGCGCCGTGGTGTGGCGTACCAAGCC
CAGTGACAACACCGTGCATAGCGATATGCTGGTGATGGGCCGCGCAGGCGATACGCCCATGGTCGGCACATCGCCCACGC
TGATCCAAGATAATGATGTTTGGTGGATTCTCAATGTGCCCGTCATGTTTCTCTGCCGCCCGCTGCGCTGCGCCACAGCC
AGTACAAATAGCAGCACCAGTGCCAGCGCCAATATCGCCAACATCCATCAGCCGAATTTCAGCGGCAGCGCGGCCCCGCT
GGAAAGCCCCACCAACCTCACCTTGAATGTGGCCGCAGCCACCAATGGAACAACCATCAATGGCCTGATTGCCGTGGCTC
CACGCGGCAAGATGGTCAAATCGGCGGCGTGGTTGTTTGCGCCTAGTCCAACCCAGTTTGGTTGGTCACGCCAAATTCAA
GCATCGGGGGTCTATGCCACTGATAACCTCCTCTGTTTCTACAACTTTCCCAGCGTCACGCCATCCTATTCGCCCAACGG
GGTGCTGACCGATATTGGGCCGCTCAATAGCCGTTCGATTATTCAGTGGGCCATGCTCAAAACGACCGCACCCTTTTTAA
TCACGCCCGTGGTGCGCAGTAATGGCGCATTAATCGAAGGCCGTGCCACCCTTGTCGATAGTGCTACCCCAATCATTGTG
CCACTTGGCCAAACCAGCGCACCCTATTTAATCACGGGCCACCAACTGAAGCTGACCAACCTGACCAACGCCGGAGCGAT
CTATATCAATGCCATCCTGACCATTGCCGCCGATGCAGGCGGCTGGAGTGTGATTCCCTTCGCGTCGCTGCCATTGCCCA
GCACGGCCACGACGATCACCGTCGATGCCCGTTATCTGAGCAACCCCGATGCCAGTCTGACGTGGACGAATGCGGGTGTA
ACCCAAGCCGTGCCCACCGATAGCAATCCCTTGGCATTGACGAAGGATCTCCAGCTCGATGTCAATCTGTTTGCGGTCAA
TGGCAATGCCTGGAGTGCCACCACCGAGAATGCCGCCAGCGCCCGCACCATGACCGTTCAAGCATCACGCCTCAATGGCG
CGATTATCCCACTGTAG

Upstream 100 bases:

>100_bases
CCCTTTGGCAAATAACGATTGACCGTGTGCAGGGCTGAAACAATCCTGCACACACGACCATTAACCCAACCACACCCACC
GCCCAAAGGAGGCGGCTTGT

Downstream 100 bases:

>100_bases
GAGGGGTCAATGTCAATGCAGTACGCGATTTCGCTTTATGATCCCTTCACCAATGTGCAACTGGCCCGCTTTGATCGCCA
GGTCACCGACGCAACCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MTTMQLLRNGSVVIDFMPAGVNPTEGTTCYWLVDGSWQPQVPQRDRRLISNGEQFQPSVQSFAVNIFGGTNEDQAWAAYH
ALMVLLDDAERFYEEGYSSAVVWRTKPSDNTVHSDMLVMGRAGDTPMVGTSPTLIQDNDVWWILNVPVMFLCRPLRCATA
STNSSTSASANIANIHQPNFSGSAAPLESPTNLTLNVAAATNGTTINGLIAVAPRGKMVKSAAWLFAPSPTQFGWSRQIQ
ASGVYATDNLLCFYNFPSVTPSYSPNGVLTDIGPLNSRSIIQWAMLKTTAPFLITPVVRSNGALIEGRATLVDSATPIIV
PLGQTSAPYLITGHQLKLTNLTNAGAIYINAILTIAADAGGWSVIPFASLPLPSTATTITVDARYLSNPDASLTWTNAGV
TQAVPTDSNPLALTKDLQLDVNLFAVNGNAWSATTENAASARTMTVQASRLNGAIIPL

Sequences:

>Translated_458_residues
MTTMQLLRNGSVVIDFMPAGVNPTEGTTCYWLVDGSWQPQVPQRDRRLISNGEQFQPSVQSFAVNIFGGTNEDQAWAAYH
ALMVLLDDAERFYEEGYSSAVVWRTKPSDNTVHSDMLVMGRAGDTPMVGTSPTLIQDNDVWWILNVPVMFLCRPLRCATA
STNSSTSASANIANIHQPNFSGSAAPLESPTNLTLNVAAATNGTTINGLIAVAPRGKMVKSAAWLFAPSPTQFGWSRQIQ
ASGVYATDNLLCFYNFPSVTPSYSPNGVLTDIGPLNSRSIIQWAMLKTTAPFLITPVVRSNGALIEGRATLVDSATPIIV
PLGQTSAPYLITGHQLKLTNLTNAGAIYINAILTIAADAGGWSVIPFASLPLPSTATTITVDARYLSNPDASLTWTNAGV
TQAVPTDSNPLALTKDLQLDVNLFAVNGNAWSATTENAASARTMTVQASRLNGAIIPL
>Mature_457_residues
TTMQLLRNGSVVIDFMPAGVNPTEGTTCYWLVDGSWQPQVPQRDRRLISNGEQFQPSVQSFAVNIFGGTNEDQAWAAYHA
LMVLLDDAERFYEEGYSSAVVWRTKPSDNTVHSDMLVMGRAGDTPMVGTSPTLIQDNDVWWILNVPVMFLCRPLRCATAS
TNSSTSASANIANIHQPNFSGSAAPLESPTNLTLNVAAATNGTTINGLIAVAPRGKMVKSAAWLFAPSPTQFGWSRQIQA
SGVYATDNLLCFYNFPSVTPSYSPNGVLTDIGPLNSRSIIQWAMLKTTAPFLITPVVRSNGALIEGRATLVDSATPIIVP
LGQTSAPYLITGHQLKLTNLTNAGAIYINAILTIAADAGGWSVIPFASLPLPSTATTITVDARYLSNPDASLTWTNAGVT
QAVPTDSNPLALTKDLQLDVNLFAVNGNAWSATTENAASARTMTVQASRLNGAIIPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48866; Mature: 48735

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTMQLLRNGSVVIDFMPAGVNPTEGTTCYWLVDGSWQPQVPQRDRRLISNGEQFQPSVQ
CCCHHHHCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCE
SFAVNIFGGTNEDQAWAAYHALMVLLDDAERFYEEGYSSAVVWRTKPSDNTVHSDMLVMG
EEEEEEECCCCCCCHHHHHHHHHEEEHHHHHHHHCCCCEEEEEEECCCCCCEECCEEEEE
RAGDTPMVGTSPTLIQDNDVWWILNVPVMFLCRPLRCATASTNSSTSASANIANIHQPNF
CCCCCCCCCCCCCEEECCCEEEEECCCHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCC
SGSAAPLESPTNLTLNVAAATNGTTINGLIAVAPRGKMVKSAAWLFAPSPTQFGWSRQIQ
CCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEECEEEEECCCCCCCCCCEEEE
ASGVYATDNLLCFYNFPSVTPSYSPNGVLTDIGPLNSRSIIQWAMLKTTAPFLITPVVRS
ECCEEEECCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCEEEEEHHCCCCEEEEEEECC
NGALIEGRATLVDSATPIIVPLGQTSAPYLITGHQLKLTNLTNAGAIYINAILTIAADAG
CCCEEECCEEEECCCCEEEEECCCCCCCEEEECCEEEEEECCCCCEEEEEEEEEEEECCC
GWSVIPFASLPLPSTATTITVDARYLSNPDASLTWTNAGVTQAVPTDSNPLALTKDLQLD
CEEEEEEECCCCCCCCEEEEEEEHCCCCCCCEEEEECCCCEEECCCCCCCEEEEEEEEEE
VNLFAVNGNAWSATTENAASARTMTVQASRLNGAIIPL
EEEEEEECCEEECCCCCCCCEEEEEEEEHHCCCEEECC
>Mature Secondary Structure 
TTMQLLRNGSVVIDFMPAGVNPTEGTTCYWLVDGSWQPQVPQRDRRLISNGEQFQPSVQ
CCHHHHCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCE
SFAVNIFGGTNEDQAWAAYHALMVLLDDAERFYEEGYSSAVVWRTKPSDNTVHSDMLVMG
EEEEEEECCCCCCCHHHHHHHHHEEEHHHHHHHHCCCCEEEEEEECCCCCCEECCEEEEE
RAGDTPMVGTSPTLIQDNDVWWILNVPVMFLCRPLRCATASTNSSTSASANIANIHQPNF
CCCCCCCCCCCCCEEECCCEEEEECCCHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCC
SGSAAPLESPTNLTLNVAAATNGTTINGLIAVAPRGKMVKSAAWLFAPSPTQFGWSRQIQ
CCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEECEEEEECCCCCCCCCCEEEE
ASGVYATDNLLCFYNFPSVTPSYSPNGVLTDIGPLNSRSIIQWAMLKTTAPFLITPVVRS
ECCEEEECCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCEEEEEHHCCCCEEEEEEECC
NGALIEGRATLVDSATPIIVPLGQTSAPYLITGHQLKLTNLTNAGAIYINAILTIAADAG
CCCEEECCEEEECCCCEEEEECCCCCCCEEEECCEEEEEECCCCCEEEEEEEEEEEECCC
GWSVIPFASLPLPSTATTITVDARYLSNPDASLTWTNAGVTQAVPTDSNPLALTKDLQLD
CEEEEEEECCCCCCCCEEEEEEEHCCCCCCCEEEEECCCCEEECCCCCCCEEEEEEEEEE
VNLFAVNGNAWSATTENAASARTMTVQASRLNGAIIPL
EEEEEEECCEEECCCCCCCCEEEEEEEEHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA