Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897076

Identifier: 159897076

GI number: 159897076

Start: 637897

End: 639582

Strand: Reverse

Name: 159897076

Synonym: Haur_0547

Alternate gene names: NA

Gene position: 639582-637897 (Counterclockwise)

Preceding gene: 159897077

Following gene: 159897075

Centisome position: 10.08

GC content: 57.3

Gene sequence:

>1686_bases
ATGTCAATGCAGTACGCGATTTCGCTTTATGATCCCTTCACCAATGTGCAACTGGCCCGCTTTGATCGCCAGGTCACCGA
CGCAACCCTGAGCACCAACGGCTTAACTGTCAGCGTGCGGCTTGTGCCGTTTATCGCCAAAACGCTGTATGCCCAAGCGC
GATTATTAACCGCCGTGGTGCAGCGCAGCGATGGCAAAACCCTGCGCTATCGCACCGTCACCCTACGCCTGATTGATCAG
GGCTTAGCCATTGAATGCCACAATCTAATTGTGACGCTCGACGACTTGGAGTACGATGGCTGGTGGTCAGTCACGAAACT
GGATGGTTGGCTGCCTGTCGAAACCGCCTCGTCCACGCCCGAGCGCTGGGAGATGCGCCACGATGATGGCACGATCAGTT
TGTCGCCGCGCAAGAATGAACAATTTAGCAACGCCAAGGGGATTGGTCGTCAGTCGCTCTTCATTCCGGCGAATCTGAAC
ACCACCGGATTCCAAGTTATCCAATTCGATTGGCGCTCGAAAGGCCCCACCAATTGGCTGGCAACCTTCCTCGCTGCCGA
GCGCGATTACAGCAGCCAAACCGGAGCGACCACGATTGCCCTGGGTAATGGCACAGCCCAAACCGGATCGCTGTGCTTCA
CCTTCGCGGCGCGGCCCCTCGTCAGTGTTGCGATGTATTACAACGCCGCCCTCGCCACCTATATCGGGGAAACAGGCGAT
GATTACCTGAAGATCAGCAACCTGCGCGTGGCCACGGTCACCACGAACATGGTCAACACGACCACCAGCGGTGCAATTGC
CATTGGCACGGCCTTCGTGCCCGTGGCGAGTACCCTCAATATCGCGGTTGGTCAACGCCTGACCATCGAAAGCGGTGGGG
TGAATAGCGAGAGTGTCGTAGTCTTGGCGGTCAATGCCACCCAATTCCAAGCCGCCTTTACCAAGACCCACGTCCTTGGC
GTGACTGTGCGCGGGATTGTCGTGACCGATAAAGAGATTGTCGAAGATGTCTTGAGCCGCAACCTCACAACCAACCCGGG
TAGCGGGATCAAGCAGAGCAGTGCGCGGATTATCAAGAGTAGCCGCGATTGTTTGGAAGCCGCATGGTCGGCTGCATCCG
GCTTGAGCGTGGTACAGGAGTTGGCCGATCAGGCGCAGTATGTGACCTATGTCGATGATGCCCAATACCTCTACTATGGT
CCCAAGGAAACAGGCCGCACCTTTGCCCTCGTCGATGGCTCGATTGAACTGGAGAAAGCGCTGGGCGAAGCAACCAACCA
AATCAGGGTTGCCTACAAGAACGCCAGTAACCAACCGCTCTATACCGCCTTCGCGGAACACGCCAGCGAGCGCTATGCCT
TAGGCATCGTTCGCCAGCGCACCATTGCCAGCGAAACCACGGATAGCACCGAGGCGGCCACGTTGCGCAGCGTCGCCTTG
ACCGATGCAGCACCGACCGTTCGCGCCAGTCTGAACGTCCGCGCCGTGCGCAACGAGTACAATGTGCGCGAGCCACTCGA
TCTACTCAGTCGTGGCGATGTGATTACCATTGGTGATTTATCCGGCGCGATCAACAAGCGCAGCTATACGCTGGCTGAAA
CCTCGGTGAATCTGATGACAGGTGAGGTGAGCGTTACGCCGGAAGCGCCGATTAAGCAGCTGGATCTGTGGTTAGCACAA
GCCTAA

Upstream 100 bases:

>100_bases
TGCCTGGAGTGCCACCACCGAGAATGCCGCCAGCGCCCGCACCATGACCGTTCAAGCATCACGCCTCAATGGCGCGATTA
TCCCACTGTAGGAGGGGTCA

Downstream 100 bases:

>100_bases
AACCATCGAGCACGTGGGAAAGAAATTCCCACGTGCTCGATGCTTACCAGAAACTAGCGTTTTTTCATCTAAAAGGAATA
CATCATTAAAACTATCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 560

Protein sequence:

>561_residues
MSMQYAISLYDPFTNVQLARFDRQVTDATLSTNGLTVSVRLVPFIAKTLYAQARLLTAVVQRSDGKTLRYRTVTLRLIDQ
GLAIECHNLIVTLDDLEYDGWWSVTKLDGWLPVETASSTPERWEMRHDDGTISLSPRKNEQFSNAKGIGRQSLFIPANLN
TTGFQVIQFDWRSKGPTNWLATFLAAERDYSSQTGATTIALGNGTAQTGSLCFTFAARPLVSVAMYYNAALATYIGETGD
DYLKISNLRVATVTTNMVNTTTSGAIAIGTAFVPVASTLNIAVGQRLTIESGGVNSESVVVLAVNATQFQAAFTKTHVLG
VTVRGIVVTDKEIVEDVLSRNLTTNPGSGIKQSSARIIKSSRDCLEAAWSAASGLSVVQELADQAQYVTYVDDAQYLYYG
PKETGRTFALVDGSIELEKALGEATNQIRVAYKNASNQPLYTAFAEHASERYALGIVRQRTIASETTDSTEAATLRSVAL
TDAAPTVRASLNVRAVRNEYNVREPLDLLSRGDVITIGDLSGAINKRSYTLAETSVNLMTGEVSVTPEAPIKQLDLWLAQ
A

Sequences:

>Translated_561_residues
MSMQYAISLYDPFTNVQLARFDRQVTDATLSTNGLTVSVRLVPFIAKTLYAQARLLTAVVQRSDGKTLRYRTVTLRLIDQ
GLAIECHNLIVTLDDLEYDGWWSVTKLDGWLPVETASSTPERWEMRHDDGTISLSPRKNEQFSNAKGIGRQSLFIPANLN
TTGFQVIQFDWRSKGPTNWLATFLAAERDYSSQTGATTIALGNGTAQTGSLCFTFAARPLVSVAMYYNAALATYIGETGD
DYLKISNLRVATVTTNMVNTTTSGAIAIGTAFVPVASTLNIAVGQRLTIESGGVNSESVVVLAVNATQFQAAFTKTHVLG
VTVRGIVVTDKEIVEDVLSRNLTTNPGSGIKQSSARIIKSSRDCLEAAWSAASGLSVVQELADQAQYVTYVDDAQYLYYG
PKETGRTFALVDGSIELEKALGEATNQIRVAYKNASNQPLYTAFAEHASERYALGIVRQRTIASETTDSTEAATLRSVAL
TDAAPTVRASLNVRAVRNEYNVREPLDLLSRGDVITIGDLSGAINKRSYTLAETSVNLMTGEVSVTPEAPIKQLDLWLAQ
A
>Mature_560_residues
SMQYAISLYDPFTNVQLARFDRQVTDATLSTNGLTVSVRLVPFIAKTLYAQARLLTAVVQRSDGKTLRYRTVTLRLIDQG
LAIECHNLIVTLDDLEYDGWWSVTKLDGWLPVETASSTPERWEMRHDDGTISLSPRKNEQFSNAKGIGRQSLFIPANLNT
TGFQVIQFDWRSKGPTNWLATFLAAERDYSSQTGATTIALGNGTAQTGSLCFTFAARPLVSVAMYYNAALATYIGETGDD
YLKISNLRVATVTTNMVNTTTSGAIAIGTAFVPVASTLNIAVGQRLTIESGGVNSESVVVLAVNATQFQAAFTKTHVLGV
TVRGIVVTDKEIVEDVLSRNLTTNPGSGIKQSSARIIKSSRDCLEAAWSAASGLSVVQELADQAQYVTYVDDAQYLYYGP
KETGRTFALVDGSIELEKALGEATNQIRVAYKNASNQPLYTAFAEHASERYALGIVRQRTIASETTDSTEAATLRSVALT
DAAPTVRASLNVRAVRNEYNVREPLDLLSRGDVITIGDLSGAINKRSYTLAETSVNLMTGEVSVTPEAPIKQLDLWLAQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60898; Mature: 60767

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMQYAISLYDPFTNVQLARFDRQVTDATLSTNGLTVSVRLVPFIAKTLYAQARLLTAVV
CCCEEEEEEECCCCCCCHHHHCCHHHCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHH
QRSDGKTLRYRTVTLRLIDQGLAIECHNLIVTLDDLEYDGWWSVTKLDGWLPVETASSTP
HCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEEEECCEEEECCCCCCC
ERWEMRHDDGTISLSPRKNEQFSNAKGIGRQSLFIPANLNTTGFQVIQFDWRSKGPTNWL
HHCEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCHHHH
ATFLAAERDYSSQTGATTIALGNGTAQTGSLCFTFAARPLVSVAMYYNAALATYIGETGD
HHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCC
DYLKISNLRVATVTTNMVNTTTSGAIAIGTAFVPVASTLNIAVGQRLTIESGGVNSESVV
CEEEEECEEEEEEEECEEECCCCCEEEEEEEHHHHHHHEEEECCCEEEEECCCCCCCCEE
VLAVNATQFQAAFTKTHVLGVTVRGIVVTDKEIVEDVLSRNLTTNPGSGIKQSSARIIKS
EEEEECHHHHHHHHHEEEEEEEEEEEEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
SRDCLEAAWSAASGLSVVQELADQAQYVTYVDDAQYLYYGPKETGRTFALVDGSIELEKA
HHHHHHHHHHHHCHHHHHHHHHCCCEEEEEEECCEEEEECCCCCCCEEEEEECCCHHHHH
LGEATNQIRVAYKNASNQPLYTAFAEHASERYALGIVRQRTIASETTDSTEAATLRSVAL
HCCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCHHHHHHEEEE
TDAAPTVRASLNVRAVRNEYNVREPLDLLSRGDVITIGDLSGAINKRSYTLAETSVNLMT
CCCCCCEEEEEEEEEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCEEEEEECEEEEEE
GEVSVTPEAPIKQLDLWLAQA
EEEEECCCCCHHHHHHHEECC
>Mature Secondary Structure 
SMQYAISLYDPFTNVQLARFDRQVTDATLSTNGLTVSVRLVPFIAKTLYAQARLLTAVV
CCEEEEEEECCCCCCCHHHHCCHHHCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHH
QRSDGKTLRYRTVTLRLIDQGLAIECHNLIVTLDDLEYDGWWSVTKLDGWLPVETASSTP
HCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEEEECCEEEECCCCCCC
ERWEMRHDDGTISLSPRKNEQFSNAKGIGRQSLFIPANLNTTGFQVIQFDWRSKGPTNWL
HHCEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCHHHH
ATFLAAERDYSSQTGATTIALGNGTAQTGSLCFTFAARPLVSVAMYYNAALATYIGETGD
HHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCC
DYLKISNLRVATVTTNMVNTTTSGAIAIGTAFVPVASTLNIAVGQRLTIESGGVNSESVV
CEEEEECEEEEEEEECEEECCCCCEEEEEEEHHHHHHHEEEECCCEEEEECCCCCCCCEE
VLAVNATQFQAAFTKTHVLGVTVRGIVVTDKEIVEDVLSRNLTTNPGSGIKQSSARIIKS
EEEEECHHHHHHHHHEEEEEEEEEEEEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
SRDCLEAAWSAASGLSVVQELADQAQYVTYVDDAQYLYYGPKETGRTFALVDGSIELEKA
HHHHHHHHHHHHCHHHHHHHHHCCCEEEEEEECCEEEEECCCCCCCEEEEEECCCHHHHH
LGEATNQIRVAYKNASNQPLYTAFAEHASERYALGIVRQRTIASETTDSTEAATLRSVAL
HCCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCHHHHHHEEEE
TDAAPTVRASLNVRAVRNEYNVREPLDLLSRGDVITIGDLSGAINKRSYTLAETSVNLMT
CCCCCCEEEEEEEEEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCEEEEEECEEEEEE
GEVSVTPEAPIKQLDLWLAQA
EEEEECCCCCHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA