| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897076
Identifier: 159897076
GI number: 159897076
Start: 637897
End: 639582
Strand: Reverse
Name: 159897076
Synonym: Haur_0547
Alternate gene names: NA
Gene position: 639582-637897 (Counterclockwise)
Preceding gene: 159897077
Following gene: 159897075
Centisome position: 10.08
GC content: 57.3
Gene sequence:
>1686_bases ATGTCAATGCAGTACGCGATTTCGCTTTATGATCCCTTCACCAATGTGCAACTGGCCCGCTTTGATCGCCAGGTCACCGA CGCAACCCTGAGCACCAACGGCTTAACTGTCAGCGTGCGGCTTGTGCCGTTTATCGCCAAAACGCTGTATGCCCAAGCGC GATTATTAACCGCCGTGGTGCAGCGCAGCGATGGCAAAACCCTGCGCTATCGCACCGTCACCCTACGCCTGATTGATCAG GGCTTAGCCATTGAATGCCACAATCTAATTGTGACGCTCGACGACTTGGAGTACGATGGCTGGTGGTCAGTCACGAAACT GGATGGTTGGCTGCCTGTCGAAACCGCCTCGTCCACGCCCGAGCGCTGGGAGATGCGCCACGATGATGGCACGATCAGTT TGTCGCCGCGCAAGAATGAACAATTTAGCAACGCCAAGGGGATTGGTCGTCAGTCGCTCTTCATTCCGGCGAATCTGAAC ACCACCGGATTCCAAGTTATCCAATTCGATTGGCGCTCGAAAGGCCCCACCAATTGGCTGGCAACCTTCCTCGCTGCCGA GCGCGATTACAGCAGCCAAACCGGAGCGACCACGATTGCCCTGGGTAATGGCACAGCCCAAACCGGATCGCTGTGCTTCA CCTTCGCGGCGCGGCCCCTCGTCAGTGTTGCGATGTATTACAACGCCGCCCTCGCCACCTATATCGGGGAAACAGGCGAT GATTACCTGAAGATCAGCAACCTGCGCGTGGCCACGGTCACCACGAACATGGTCAACACGACCACCAGCGGTGCAATTGC CATTGGCACGGCCTTCGTGCCCGTGGCGAGTACCCTCAATATCGCGGTTGGTCAACGCCTGACCATCGAAAGCGGTGGGG TGAATAGCGAGAGTGTCGTAGTCTTGGCGGTCAATGCCACCCAATTCCAAGCCGCCTTTACCAAGACCCACGTCCTTGGC GTGACTGTGCGCGGGATTGTCGTGACCGATAAAGAGATTGTCGAAGATGTCTTGAGCCGCAACCTCACAACCAACCCGGG TAGCGGGATCAAGCAGAGCAGTGCGCGGATTATCAAGAGTAGCCGCGATTGTTTGGAAGCCGCATGGTCGGCTGCATCCG GCTTGAGCGTGGTACAGGAGTTGGCCGATCAGGCGCAGTATGTGACCTATGTCGATGATGCCCAATACCTCTACTATGGT CCCAAGGAAACAGGCCGCACCTTTGCCCTCGTCGATGGCTCGATTGAACTGGAGAAAGCGCTGGGCGAAGCAACCAACCA AATCAGGGTTGCCTACAAGAACGCCAGTAACCAACCGCTCTATACCGCCTTCGCGGAACACGCCAGCGAGCGCTATGCCT TAGGCATCGTTCGCCAGCGCACCATTGCCAGCGAAACCACGGATAGCACCGAGGCGGCCACGTTGCGCAGCGTCGCCTTG ACCGATGCAGCACCGACCGTTCGCGCCAGTCTGAACGTCCGCGCCGTGCGCAACGAGTACAATGTGCGCGAGCCACTCGA TCTACTCAGTCGTGGCGATGTGATTACCATTGGTGATTTATCCGGCGCGATCAACAAGCGCAGCTATACGCTGGCTGAAA CCTCGGTGAATCTGATGACAGGTGAGGTGAGCGTTACGCCGGAAGCGCCGATTAAGCAGCTGGATCTGTGGTTAGCACAA GCCTAA
Upstream 100 bases:
>100_bases TGCCTGGAGTGCCACCACCGAGAATGCCGCCAGCGCCCGCACCATGACCGTTCAAGCATCACGCCTCAATGGCGCGATTA TCCCACTGTAGGAGGGGTCA
Downstream 100 bases:
>100_bases AACCATCGAGCACGTGGGAAAGAAATTCCCACGTGCTCGATGCTTACCAGAAACTAGCGTTTTTTCATCTAAAAGGAATA CATCATTAAAACTATCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MSMQYAISLYDPFTNVQLARFDRQVTDATLSTNGLTVSVRLVPFIAKTLYAQARLLTAVVQRSDGKTLRYRTVTLRLIDQ GLAIECHNLIVTLDDLEYDGWWSVTKLDGWLPVETASSTPERWEMRHDDGTISLSPRKNEQFSNAKGIGRQSLFIPANLN TTGFQVIQFDWRSKGPTNWLATFLAAERDYSSQTGATTIALGNGTAQTGSLCFTFAARPLVSVAMYYNAALATYIGETGD DYLKISNLRVATVTTNMVNTTTSGAIAIGTAFVPVASTLNIAVGQRLTIESGGVNSESVVVLAVNATQFQAAFTKTHVLG VTVRGIVVTDKEIVEDVLSRNLTTNPGSGIKQSSARIIKSSRDCLEAAWSAASGLSVVQELADQAQYVTYVDDAQYLYYG PKETGRTFALVDGSIELEKALGEATNQIRVAYKNASNQPLYTAFAEHASERYALGIVRQRTIASETTDSTEAATLRSVAL TDAAPTVRASLNVRAVRNEYNVREPLDLLSRGDVITIGDLSGAINKRSYTLAETSVNLMTGEVSVTPEAPIKQLDLWLAQ A
Sequences:
>Translated_561_residues MSMQYAISLYDPFTNVQLARFDRQVTDATLSTNGLTVSVRLVPFIAKTLYAQARLLTAVVQRSDGKTLRYRTVTLRLIDQ GLAIECHNLIVTLDDLEYDGWWSVTKLDGWLPVETASSTPERWEMRHDDGTISLSPRKNEQFSNAKGIGRQSLFIPANLN TTGFQVIQFDWRSKGPTNWLATFLAAERDYSSQTGATTIALGNGTAQTGSLCFTFAARPLVSVAMYYNAALATYIGETGD DYLKISNLRVATVTTNMVNTTTSGAIAIGTAFVPVASTLNIAVGQRLTIESGGVNSESVVVLAVNATQFQAAFTKTHVLG VTVRGIVVTDKEIVEDVLSRNLTTNPGSGIKQSSARIIKSSRDCLEAAWSAASGLSVVQELADQAQYVTYVDDAQYLYYG PKETGRTFALVDGSIELEKALGEATNQIRVAYKNASNQPLYTAFAEHASERYALGIVRQRTIASETTDSTEAATLRSVAL TDAAPTVRASLNVRAVRNEYNVREPLDLLSRGDVITIGDLSGAINKRSYTLAETSVNLMTGEVSVTPEAPIKQLDLWLAQ A >Mature_560_residues SMQYAISLYDPFTNVQLARFDRQVTDATLSTNGLTVSVRLVPFIAKTLYAQARLLTAVVQRSDGKTLRYRTVTLRLIDQG LAIECHNLIVTLDDLEYDGWWSVTKLDGWLPVETASSTPERWEMRHDDGTISLSPRKNEQFSNAKGIGRQSLFIPANLNT TGFQVIQFDWRSKGPTNWLATFLAAERDYSSQTGATTIALGNGTAQTGSLCFTFAARPLVSVAMYYNAALATYIGETGDD YLKISNLRVATVTTNMVNTTTSGAIAIGTAFVPVASTLNIAVGQRLTIESGGVNSESVVVLAVNATQFQAAFTKTHVLGV TVRGIVVTDKEIVEDVLSRNLTTNPGSGIKQSSARIIKSSRDCLEAAWSAASGLSVVQELADQAQYVTYVDDAQYLYYGP KETGRTFALVDGSIELEKALGEATNQIRVAYKNASNQPLYTAFAEHASERYALGIVRQRTIASETTDSTEAATLRSVALT DAAPTVRASLNVRAVRNEYNVREPLDLLSRGDVITIGDLSGAINKRSYTLAETSVNLMTGEVSVTPEAPIKQLDLWLAQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60898; Mature: 60767
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMQYAISLYDPFTNVQLARFDRQVTDATLSTNGLTVSVRLVPFIAKTLYAQARLLTAVV CCCEEEEEEECCCCCCCHHHHCCHHHCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHH QRSDGKTLRYRTVTLRLIDQGLAIECHNLIVTLDDLEYDGWWSVTKLDGWLPVETASSTP HCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEEEECCEEEECCCCCCC ERWEMRHDDGTISLSPRKNEQFSNAKGIGRQSLFIPANLNTTGFQVIQFDWRSKGPTNWL HHCEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCHHHH ATFLAAERDYSSQTGATTIALGNGTAQTGSLCFTFAARPLVSVAMYYNAALATYIGETGD HHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCC DYLKISNLRVATVTTNMVNTTTSGAIAIGTAFVPVASTLNIAVGQRLTIESGGVNSESVV CEEEEECEEEEEEEECEEECCCCCEEEEEEEHHHHHHHEEEECCCEEEEECCCCCCCCEE VLAVNATQFQAAFTKTHVLGVTVRGIVVTDKEIVEDVLSRNLTTNPGSGIKQSSARIIKS EEEEECHHHHHHHHHEEEEEEEEEEEEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH SRDCLEAAWSAASGLSVVQELADQAQYVTYVDDAQYLYYGPKETGRTFALVDGSIELEKA HHHHHHHHHHHHCHHHHHHHHHCCCEEEEEEECCEEEEECCCCCCCEEEEEECCCHHHHH LGEATNQIRVAYKNASNQPLYTAFAEHASERYALGIVRQRTIASETTDSTEAATLRSVAL HCCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCHHHHHHEEEE TDAAPTVRASLNVRAVRNEYNVREPLDLLSRGDVITIGDLSGAINKRSYTLAETSVNLMT CCCCCCEEEEEEEEEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCEEEEEECEEEEEE GEVSVTPEAPIKQLDLWLAQA EEEEECCCCCHHHHHHHEECC >Mature Secondary Structure SMQYAISLYDPFTNVQLARFDRQVTDATLSTNGLTVSVRLVPFIAKTLYAQARLLTAVV CCEEEEEEECCCCCCCHHHHCCHHHCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHH QRSDGKTLRYRTVTLRLIDQGLAIECHNLIVTLDDLEYDGWWSVTKLDGWLPVETASSTP HCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEEEECCEEEECCCCCCC ERWEMRHDDGTISLSPRKNEQFSNAKGIGRQSLFIPANLNTTGFQVIQFDWRSKGPTNWL HHCEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCHHHH ATFLAAERDYSSQTGATTIALGNGTAQTGSLCFTFAARPLVSVAMYYNAALATYIGETGD HHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCC DYLKISNLRVATVTTNMVNTTTSGAIAIGTAFVPVASTLNIAVGQRLTIESGGVNSESVV CEEEEECEEEEEEEECEEECCCCCEEEEEEEHHHHHHHEEEECCCEEEEECCCCCCCCEE VLAVNATQFQAAFTKTHVLGVTVRGIVVTDKEIVEDVLSRNLTTNPGSGIKQSSARIIKS EEEEECHHHHHHHHHEEEEEEEEEEEEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH SRDCLEAAWSAASGLSVVQELADQAQYVTYVDDAQYLYYGPKETGRTFALVDGSIELEKA HHHHHHHHHHHHCHHHHHHHHHCCCEEEEEEECCEEEEECCCCCCCEEEEEECCCHHHHH LGEATNQIRVAYKNASNQPLYTAFAEHASERYALGIVRQRTIASETTDSTEAATLRSVAL HCCCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCHHHHHHEEEE TDAAPTVRASLNVRAVRNEYNVREPLDLLSRGDVITIGDLSGAINKRSYTLAETSVNLMT CCCCCCEEEEEEEEEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCEEEEEECEEEEEE GEVSVTPEAPIKQLDLWLAQA EEEEECCCCCHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA