| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is dnaI [H]
Identifier: 159897053
GI number: 159897053
Start: 610763
End: 611473
Strand: Reverse
Name: dnaI [H]
Synonym: Haur_0524
Alternate gene names: 159897053
Gene position: 611473-610763 (Counterclockwise)
Preceding gene: 159897054
Following gene: 159897049
Centisome position: 9.63
GC content: 50.49
Gene sequence:
>711_bases ATGACCAATGCTGTTTGGGAACGTGAAGAAACGATCACCTGTGAGCGCTGTCAAGATAGTGGCGTGCTCGGCTATCGCTA TAGCGATGATAAAACCCGCAAGGCGATTGAGTATATTCCTTGCGACTGTCGCAAACCAACCATACTACAGAAGCATGGCG ACTTAAGCCTTGTCGCCAAAAAAACATTTGAAACCTTTGTGAGCTTGCCACAGGTAGCACCGCTGGCTCAGGCCTGCATG GATTATGCAAGTGACCCCAAAGGCTGGTTATTACTTTCGGGGCCATATGGTTGTGGCAAGAGCCACCTAGCCGCTGCGAT TGCTCATGCTGTCGTTGCCAGCGGCAAGAGCGCCATGTTTTTCGTAGTGCCTGATTTGTTCGATGCCTTACGCGAAACCT TTGATGGCCAACAAGGCGAATCGTTTCAACAGCGCTTTGACCGCATTCGCAATGTTCCCTTACTGGTGCTTGATGATGCT GGTACTGAGCACCTTACTAGCTGGGCCAAAGAAAAACACTTTCAGCTGATCAATCACCGCTACAACCGCGAGCTACCAAC GGTGTTTACCACCAACGAAGATTTGAAGCGCTTTGATGGGCGTATCGCGAGCCGTTTGGCTGATGTTGCGCTGGTTGAAC ACTTGGATTTCACGGGCATTGCCGATTATCGACGATTGAATCTAGCCAAGCGACGAGGTAAAGCCGCATGA
Upstream 100 bases:
>100_bases ATGGCCGAATTCAAGCCCAATACGATGATTGGACTGAAATGATCTACAAGCGCTGGGGGCCATTGGCCAACAGGCTGGTT GAAGCTGCTGGGGGGACACA
Downstream 100 bases:
>100_bases GCCGAATGAATACTGATCTTGTCCGTAAAGTCTGGGCCGCTGTAAGTCAGCAACCGCAAGCATCGATTCAAGAATTGGCT ACGGCTGTTGGTATCCCATA
Product: IstB ATP binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTNAVWEREETITCERCQDSGVLGYRYSDDKTRKAIEYIPCDCRKPTILQKHGDLSLVAKKTFETFVSLPQVAPLAQACM DYASDPKGWLLLSGPYGCGKSHLAAAIAHAVVASGKSAMFFVVPDLFDALRETFDGQQGESFQQRFDRIRNVPLLVLDDA GTEHLTSWAKEKHFQLINHRYNRELPTVFTTNEDLKRFDGRIASRLADVALVEHLDFTGIADYRRLNLAKRRGKAA
Sequences:
>Translated_236_residues MTNAVWEREETITCERCQDSGVLGYRYSDDKTRKAIEYIPCDCRKPTILQKHGDLSLVAKKTFETFVSLPQVAPLAQACM DYASDPKGWLLLSGPYGCGKSHLAAAIAHAVVASGKSAMFFVVPDLFDALRETFDGQQGESFQQRFDRIRNVPLLVLDDA GTEHLTSWAKEKHFQLINHRYNRELPTVFTTNEDLKRFDGRIASRLADVALVEHLDFTGIADYRRLNLAKRRGKAA >Mature_235_residues TNAVWEREETITCERCQDSGVLGYRYSDDKTRKAIEYIPCDCRKPTILQKHGDLSLVAKKTFETFVSLPQVAPLAQACMD YASDPKGWLLLSGPYGCGKSHLAAAIAHAVVASGKSAMFFVVPDLFDALRETFDGQQGESFQQRFDRIRNVPLLVLDDAG TEHLTSWAKEKHFQLINHRYNRELPTVFTTNEDLKRFDGRIASRLADVALVEHLDFTGIADYRRLNLAKRRGKAA
Specific function: Probably involved in DNA replication [H]
COG id: COG1484
COG function: function code L; DNA replication protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790823, Length=119, Percent_Identity=31.9327731092437, Blast_Score=74, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR009928 - InterPro: IPR002611 [H]
Pfam domain/function: PF07319 DnaI_N; PF01695 IstB [H]
EC number: NA
Molecular weight: Translated: 26613; Mature: 26481
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAVWEREETITCERCQDSGVLGYRYSDDKTRKAIEYIPCDCRKPTILQKHGDLSLVAK CCCCCCCCCCCCCHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHH KTFETFVSLPQVAPLAQACMDYASDPKGWLLLSGPYGCGKSHLAAAIAHAVVASGKSAMF HHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEE FVVPDLFDALRETFDGQQGESFQQRFDRIRNVPLLVLDDAGTEHLTSWAKEKHFQLINHR EECHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH YNRELPTVFTTNEDLKRFDGRIASRLADVALVEHLDFTGIADYRRLNLAKRRGKAA HCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TNAVWEREETITCERCQDSGVLGYRYSDDKTRKAIEYIPCDCRKPTILQKHGDLSLVAK CCCCCCCCCCCCHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHH KTFETFVSLPQVAPLAQACMDYASDPKGWLLLSGPYGCGKSHLAAAIAHAVVASGKSAMF HHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEE FVVPDLFDALRETFDGQQGESFQQRFDRIRNVPLLVLDDAGTEHLTSWAKEKHFQLINHR EECHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH YNRELPTVFTTNEDLKRFDGRIASRLADVALVEHLDFTGIADYRRLNLAKRRGKAA HCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3027671; 8969504; 9387221; 9384377; 3027697; 1549481; 7773414 [H]