Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897049

Identifier: 159897049

GI number: 159897049

Start: 603787

End: 604572

Strand: Reverse

Name: 159897049

Synonym: Haur_0519

Alternate gene names: NA

Gene position: 604572-603787 (Counterclockwise)

Preceding gene: 159897053

Following gene: 159897046

Centisome position: 9.53

GC content: 48.35

Gene sequence:

>786_bases
ATGAGTGAATTACGCGGCTTTTCGTTAAGCCAAGAGGAATTATTTGTTTGTTTGATTGTGGCCGATTTGCCCTTGCCGCT
GGGCTTTGACGATTTGGCCAATCAAGTCTTTGGCGATTTGCCTGAGCAATATCAACAATATTTATTAGGAGCCGCCGAAC
GGAGCCTGATCGCCCACGGCCTGCTCGAATTAACCGATGACCAGCCTGTTTTGGAGCCGATGGTGGCCGAGTGGCTGAGC
ATTATTAGCCAACCCAGCCAAACTTGGGTGATTTTGCATCAGCCTGCTGGCCAAAAACAACAGGCAAACTATATTCATCA
TGCTAAACAGCAATACCTTTTTCATCGCGGACAAGGCGGTATTCACCAACTGATTGCCCTACCCCACACGCGCGAGATTG
TGCAAGCAGCGCTGGATATTATTGAGCCAGCCGAAGTTGAAGTTGCCGAAACGTTAACGGGAAGCTTGAGCGAAGCAGTG
TTTCGAAGCATCGCCAGCATGCGTACAATCAAACGCGAACAGGTGGTTGAGCAATTGCAAGCTGGCGGTTTAACTGCCAA
TGTGGCTGAAGCATTTGGCCAAAGTTTTGAGCAATTGCGTTCGATCAGTGCCTTAGCATTGCTTCAAAATAAGCCAGAAA
GTAGCGTGCAACAGGCTTTTACCTTGGTTTGTGGTGAGCAACAACAATGGTTACTTGTGCCCGAAGCTGAAGGTTCGCTC
TATGTGCGCAATCTCGATCTTAATGCATTAGTCCAAGTGCTACACAATTTTGCCCACCCGCAGTAA

Upstream 100 bases:

>100_bases
AGCCGTTTAGGATTAACAAGCGAGCCTATCACCAACAACGCTAGCCGTAGTTGGAGTACTGGTATAATCGCATTTTCAAA
CTAATCCATGGAGTATCCAA

Downstream 100 bases:

>100_bases
GCCAAGTCAAAGCCCCTTGAACGAACTCAAGGGGCTTTTTGGTTTTTAGCGCGTCAGCGTCCACAAACTTTCGCCAGTCC
GTAAATTGGTCATCGTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSELRGFSLSQEELFVCLIVADLPLPLGFDDLANQVFGDLPEQYQQYLLGAAERSLIAHGLLELTDDQPVLEPMVAEWLS
IISQPSQTWVILHQPAGQKQQANYIHHAKQQYLFHRGQGGIHQLIALPHTREIVQAALDIIEPAEVEVAETLTGSLSEAV
FRSIASMRTIKREQVVEQLQAGGLTANVAEAFGQSFEQLRSISALALLQNKPESSVQQAFTLVCGEQQQWLLVPEAEGSL
YVRNLDLNALVQVLHNFAHPQ

Sequences:

>Translated_261_residues
MSELRGFSLSQEELFVCLIVADLPLPLGFDDLANQVFGDLPEQYQQYLLGAAERSLIAHGLLELTDDQPVLEPMVAEWLS
IISQPSQTWVILHQPAGQKQQANYIHHAKQQYLFHRGQGGIHQLIALPHTREIVQAALDIIEPAEVEVAETLTGSLSEAV
FRSIASMRTIKREQVVEQLQAGGLTANVAEAFGQSFEQLRSISALALLQNKPESSVQQAFTLVCGEQQQWLLVPEAEGSL
YVRNLDLNALVQVLHNFAHPQ
>Mature_260_residues
SELRGFSLSQEELFVCLIVADLPLPLGFDDLANQVFGDLPEQYQQYLLGAAERSLIAHGLLELTDDQPVLEPMVAEWLSI
ISQPSQTWVILHQPAGQKQQANYIHHAKQQYLFHRGQGGIHQLIALPHTREIVQAALDIIEPAEVEVAETLTGSLSEAVF
RSIASMRTIKREQVVEQLQAGGLTANVAEAFGQSFEQLRSISALALLQNKPESSVQQAFTLVCGEQQQWLLVPEAEGSLY
VRNLDLNALVQVLHNFAHPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28947; Mature: 28816

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELRGFSLSQEELFVCLIVADLPLPLGFDDLANQVFGDLPEQYQQYLLGAAERSLIAHG
CCCCCCCCCCHHHHEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LLELTDDQPVLEPMVAEWLSIISQPSQTWVILHQPAGQKQQANYIHHAKQQYLFHRGQGG
HHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC
IHQLIALPHTREIVQAALDIIEPAEVEVAETLTGSLSEAVFRSIASMRTIKREQVVEQLQ
HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGLTANVAEAFGQSFEQLRSISALALLQNKPESSVQQAFTLVCGEQQQWLLVPEAEGSL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCE
YVRNLDLNALVQVLHNFAHPQ
EEEECCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SELRGFSLSQEELFVCLIVADLPLPLGFDDLANQVFGDLPEQYQQYLLGAAERSLIAHG
CCCCCCCCCHHHHEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LLELTDDQPVLEPMVAEWLSIISQPSQTWVILHQPAGQKQQANYIHHAKQQYLFHRGQGG
HHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC
IHQLIALPHTREIVQAALDIIEPAEVEVAETLTGSLSEAVFRSIASMRTIKREQVVEQLQ
HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGGLTANVAEAFGQSFEQLRSISALALLQNKPESSVQQAFTLVCGEQQQWLLVPEAEGSL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCE
YVRNLDLNALVQVLHNFAHPQ
EEEECCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA