| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897007
Identifier: 159897007
GI number: 159897007
Start: 554174
End: 554599
Strand: Reverse
Name: 159897007
Synonym: Haur_0475
Alternate gene names: NA
Gene position: 554599-554174 (Counterclockwise)
Preceding gene: 159897012
Following gene: 159897001
Centisome position: 8.74
GC content: 64.08
Gene sequence:
>426_bases TTGCTGATTGTTGTTTTGGCCACGGCCACCGCTGCCCCGGGGTGGAACGCCACCGCTACCACGAGGTGGAACGCCACCGC CGCCACCGCCGCCACCACGATTGCCACCTGGGCCGCCGCCACCACGGCTTTGGTTATTATTGCGGTTGCCACCACCGCCA CCGCCGCCGCCACCAGAGCGGTTACGATCGTCTTCGCCGCTACGGGCAGGACGAGCACCACCAGGCGATTGAGGCCGATT GCGGTTACCACCGCTACCGCCACCACCGCCACGGTTGCCACCGCCACCACCGCCGCCGCCACGGTTACCACCGCTGCCGC CGCTACTAGCGGAGAAGCCTTCACGGCCAGATTTGCGATTGTTTGCGCGATCACTTACGCCATCGCGAGTATTTTTTTGA GAAACTGGCATCTATGGTCCTCCTAA
Upstream 100 bases:
>100_bases ACTCACGCACCGTCATGACCGGCCCAAGCTCAACTGGGCCACGTGGGCGGGCGGGAGCAACTGGGCGAGCCATAATTGGC GTACCACGGCCACGACCGCC
Downstream 100 bases:
>100_bases TACCCAACACCAAGGGGGTGTTGAGGTTTGGGAAGCCGAAGCCAGAGGCGAAGGCAGTGATGCGGCTTAGTTCATCGCAG CCTCCACCGCTGGTTCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MLIVVLATATAAPGWNATATTRWNATAATAATTIATWAAATTALVIIAVATTATAAATRAVTIVFAATGRTSTTRRLRPI AVTTATATTATVATATTAAATVTTAAAATSGEAFTARFAIVCAITYAIASIFLRNWHLWSS
Sequences:
>Translated_141_residues MLIVVLATATAAPGWNATATTRWNATAATAATTIATWAAATTALVIIAVATTATAAATRAVTIVFAATGRTSTTRRLRPI AVTTATATTATVATATTAAATVTTAAAATSGEAFTARFAIVCAITYAIASIFLRNWHLWSS >Mature_141_residues MLIVVLATATAAPGWNATATTRWNATAATAATTIATWAAATTALVIIAVATTATAAATRAVTIVFAATGRTSTTRRLRPI AVTTATATTATVATATTAAATVTTAAAATSGEAFTARFAIVCAITYAIASIFLRNWHLWSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14163; Mature: 14163
Theoretical pI: Translated: 12.50; Mature: 12.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIVVLATATAAPGWNATATTRWNATAATAATTIATWAAATTALVIIAVATTATAAATRA CEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHEE VTIVFAATGRTSTTRRLRPIAVTTATATTATVATATTAAATVTTAAAATSGEAFTARFAI EEEEEEECCCCCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VCAITYAIASIFLRNWHLWSS HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLIVVLATATAAPGWNATATTRWNATAATAATTIATWAAATTALVIIAVATTATAAATRA CEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHEE VTIVFAATGRTSTTRRLRPIAVTTATATTATVATATTAAATVTTAAAATSGEAFTARFAI EEEEEEECCCCCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VCAITYAIASIFLRNWHLWSS HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA