| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896993
Identifier: 159896993
GI number: 159896993
Start: 538200
End: 539177
Strand: Reverse
Name: 159896993
Synonym: Haur_0461
Alternate gene names: NA
Gene position: 539177-538200 (Counterclockwise)
Preceding gene: 159896999
Following gene: 159896992
Centisome position: 8.5
GC content: 48.88
Gene sequence:
>978_bases ATGTATAGCACCACCAAAAATGCCAAAACCCGCGAGCAAATTGCTACCATGGTAGCCCATGCCTTCGAAGGCATGCAGCT TGCCCCCCACGAACAAGCAATTCAAGAACTCAAAGATGGTTGGTTTAATGCTGCCTACGCCATCAGTTTAGCCGATGGCC GCGAAGTTGTGCTCAAAATTGCGCCACTACCTGATGCCGATGTGCTGAGCTACGAGCGCAATATTATGCAGACCGAAGTC GCGACCATGCGCTTGGTCCAGCAAAATCCAGCGATTCCTGTGCCAACAATTTATTTTTTTGACGAAAGCTTGAGCATGTG CGATTCGCCTTACTTTTTTATGCAAAAAATTGCTGGCGATAATCTCGAACATGTGCGGGCAGCGCTTGAGCCAGCAGTCC AAGCCAAGGTTGATCAGCACATCGGGGCGATTATCCACGAAATCAATCAATTTAGCGGCAGCTATTTTGGCTACGAAGGC AACCCCAAACTACGCGGCGATAGCTGGAAAGCCACATTTATCACGTTAATCGATGCCTTGTTGGCTGATGGTCAGCGTAA AAACGTTGAACTTGAATATAGCTATGCTGAAATTCGCGCGGCGGTGTTGAAGCATGCCGCTGCGCTTGATGAAGTTACCA CGCCTTATCTGGTACATTGGGATGCTTGGAACGCCAACTTTTTTGTGGAGCATGACAAGATTGTTGGGATCATCGATTTT GAGCGGGCGCTATGGGGCGATCCCTTGATGGAAGCCCAATTTCGGCCATTCTCGGGCGAAAGCCTGAGCAATTTTATGCA GGGCTATGGCAAAATAGCTTTTACGCCTGCGGAAGAACAGCGCAATCAACTGTATTCGTTATATTTGGCGCTGGTGATGG CGATCGAATGCTACTATCGCAATTACGATACCGATTTTGTACGCACAATTGCCCGTCAACTGCTCGGCGCAACCATGGAT TGGCTCAAGGCTGATTAG
Upstream 100 bases:
>100_bases CATACTCTCCTTGAACTTCCAACCCAGTCGCTTTGGTTCTCCCGATCGGGGCGGCTGGGTTGGAGGTTTTCAGCGTTAGC AGCGTTGTGAAAGGCAGCCA
Downstream 100 bases:
>100_bases ATTGTATGGCAACAGCTAGCATTGAAAAATTAGGAACCGCTCCCATCGGCAAGTTGCTATTAGCGATGTCGTCGCAAACC ACCATCTCGCTGTTGGTCTA
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MYSTTKNAKTREQIATMVAHAFEGMQLAPHEQAIQELKDGWFNAAYAISLADGREVVLKIAPLPDADVLSYERNIMQTEV ATMRLVQQNPAIPVPTIYFFDESLSMCDSPYFFMQKIAGDNLEHVRAALEPAVQAKVDQHIGAIIHEINQFSGSYFGYEG NPKLRGDSWKATFITLIDALLADGQRKNVELEYSYAEIRAAVLKHAAALDEVTTPYLVHWDAWNANFFVEHDKIVGIIDF ERALWGDPLMEAQFRPFSGESLSNFMQGYGKIAFTPAEEQRNQLYSLYLALVMAIECYYRNYDTDFVRTIARQLLGATMD WLKAD
Sequences:
>Translated_325_residues MYSTTKNAKTREQIATMVAHAFEGMQLAPHEQAIQELKDGWFNAAYAISLADGREVVLKIAPLPDADVLSYERNIMQTEV ATMRLVQQNPAIPVPTIYFFDESLSMCDSPYFFMQKIAGDNLEHVRAALEPAVQAKVDQHIGAIIHEINQFSGSYFGYEG NPKLRGDSWKATFITLIDALLADGQRKNVELEYSYAEIRAAVLKHAAALDEVTTPYLVHWDAWNANFFVEHDKIVGIIDF ERALWGDPLMEAQFRPFSGESLSNFMQGYGKIAFTPAEEQRNQLYSLYLALVMAIECYYRNYDTDFVRTIARQLLGATMD WLKAD >Mature_325_residues MYSTTKNAKTREQIATMVAHAFEGMQLAPHEQAIQELKDGWFNAAYAISLADGREVVLKIAPLPDADVLSYERNIMQTEV ATMRLVQQNPAIPVPTIYFFDESLSMCDSPYFFMQKIAGDNLEHVRAALEPAVQAKVDQHIGAIIHEINQFSGSYFGYEG NPKLRGDSWKATFITLIDALLADGQRKNVELEYSYAEIRAAVLKHAAALDEVTTPYLVHWDAWNANFFVEHDKIVGIIDF ERALWGDPLMEAQFRPFSGESLSNFMQGYGKIAFTPAEEQRNQLYSLYLALVMAIECYYRNYDTDFVRTIARQLLGATMD WLKAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36864; Mature: 36864
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSTTKNAKTREQIATMVAHAFEGMQLAPHEQAIQELKDGWFNAAYAISLADGREVVLKI CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEEE APLPDADVLSYERNIMQTEVATMRLVQQNPAIPVPTIYFFDESLSMCDSPYFFMQKIAGD ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCHHHHHHHHCCC NLEHVRAALEPAVQAKVDQHIGAIIHEINQFSGSYFGYEGNPKLRGDSWKATFITLIDAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LADGQRKNVELEYSYAEIRAAVLKHAAALDEVTTPYLVHWDAWNANFFVEHDKIVGIIDF HCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCEEEEEEH ERALWGDPLMEAQFRPFSGESLSNFMQGYGKIAFTPAEEQRNQLYSLYLALVMAIECYYR HHHHCCCCHHHCCCCCCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHC NYDTDFVRTIARQLLGATMDWLKAD CCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYSTTKNAKTREQIATMVAHAFEGMQLAPHEQAIQELKDGWFNAAYAISLADGREVVLKI CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEEE APLPDADVLSYERNIMQTEVATMRLVQQNPAIPVPTIYFFDESLSMCDSPYFFMQKIAGD ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCHHHHHHHHCCC NLEHVRAALEPAVQAKVDQHIGAIIHEINQFSGSYFGYEGNPKLRGDSWKATFITLIDAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LADGQRKNVELEYSYAEIRAAVLKHAAALDEVTTPYLVHWDAWNANFFVEHDKIVGIIDF HCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCEEEEEEH ERALWGDPLMEAQFRPFSGESLSNFMQGYGKIAFTPAEEQRNQLYSLYLALVMAIECYYR HHHHCCCCHHHCCCCCCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHC NYDTDFVRTIARQLLGATMDWLKAD CCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA