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The map label for this gene is ccpA [H]

Identifier: 159896991

GI number: 159896991

Start: 535805

End: 536827

Strand: Reverse

Name: ccpA [H]

Synonym: Haur_0459

Alternate gene names: 159896991

Gene position: 536827-535805 (Counterclockwise)

Preceding gene: 159896992

Following gene: 159896987

Centisome position: 8.46

GC content: 52.98

Gene sequence:

>1023_bases
ATGGCATCATTGACGATTGAACAAATTGCAGAATTGGCGCATGTCTCGATTGCAACGGTTTCGCGGGTGCTGAACAATCA
GCCGCATGTACGGGCCGAAGTGCGCGAACGAGTGCTCGCCGTGATGCAGGAGCATCATTACACCCCGCATGCAGCAGCGC
GAACCTTGGCAGGCCAACGCCCCAAAGTAATTGCGGTCTTTATTTCGCGCACTACTGCCACAATCTTTCGTAACCCGACC
TTTTCGCACCTGCTTCAGGGCATGACCGAGGCTTGTAATGCCAAGGGCTATGTATTAATGGTCTCGTTGGATAGCGCCAA
TCGGGCCGATGATCCAGCGACTAAATTACTGAATGGTCGCAGCGTCGATGGCCGAATCGTGATTCCCAATACAATCAATG
ATCCATTGTTACCGCAACTGATCGCCGACCGCGTGCCGATGGTGCTGGTGGGCAAACATCCCTTGCTGCATCATATTGTC
AGCGTCGATATTGACCATTTTGCGGGTAGCTACCAAGCAGTGCATCATCTGCTGAAACTTGGCCATCAATCGGTTGGCAT
GATCGTTGGCTCGTTGCATGCACTGGCCACCCACGATCAGATTGAGGGCTATCAACAGGCCTATCGCGAGGCAGGTTTGC
CAATTCACCCAGCATTGATTGCCACTGGAAATGAGACTGAACAAGGCGGCCAAGCGGCAATTGAGCAATTACTAGCCTTG
CAACCACGGCCAAGCGCCCTGTTTGTCAGCAGCGCCGTGATGGCCACAGGCGTATTACAAACCTTGCATACCCAAGGGCT
GCGCGTGCCTGATGATATAACCGTGGTCTGTTTTGATGATGTGCCAACTGCCGCCAGCCTCAACCCCAGCATGACCTCGT
TGCACCAACCAATGTACGATCTTGGTGCAACCGCCGCCAATGTGTTGATCGAGCTGATCGAAGGCAAAACTCCTAGCAGC
GAAAATACCATTTTGCCAATTAGCATGATCGTGCGCCACGAAAACGAGGTTTGGGGTGGCTAA

Upstream 100 bases:

>100_bases
CAGAATTATTGCTCTGTGGCGCAGCTTTTTGGTTGCTGAACAAACTGCGCCAACAAACCTATCAGCCACTTGGTCCAGAA
GGGAATTAGTAGGTCGCGTT

Downstream 100 bases:

>100_bases
ACATTTCAAGGAGTGGGAAGCGTGATTGGATTCTGTTCAATGATCGTGCCATCTATTCCCACAACTTCTAGTCGAATTGG
CGGATTATGTTTGGGCATGA

Product: LacI family transcription regulator

Products: NA

Alternate protein names: Catabolite control protein [H]

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MASLTIEQIAELAHVSIATVSRVLNNQPHVRAEVRERVLAVMQEHHYTPHAAARTLAGQRPKVIAVFISRTTATIFRNPT
FSHLLQGMTEACNAKGYVLMVSLDSANRADDPATKLLNGRSVDGRIVIPNTINDPLLPQLIADRVPMVLVGKHPLLHHIV
SVDIDHFAGSYQAVHHLLKLGHQSVGMIVGSLHALATHDQIEGYQQAYREAGLPIHPALIATGNETEQGGQAAIEQLLAL
QPRPSALFVSSAVMATGVLQTLHTQGLRVPDDITVVCFDDVPTAASLNPSMTSLHQPMYDLGATAANVLIELIEGKTPSS
ENTILPISMIVRHENEVWGG

Sequences:

>Translated_340_residues
MASLTIEQIAELAHVSIATVSRVLNNQPHVRAEVRERVLAVMQEHHYTPHAAARTLAGQRPKVIAVFISRTTATIFRNPT
FSHLLQGMTEACNAKGYVLMVSLDSANRADDPATKLLNGRSVDGRIVIPNTINDPLLPQLIADRVPMVLVGKHPLLHHIV
SVDIDHFAGSYQAVHHLLKLGHQSVGMIVGSLHALATHDQIEGYQQAYREAGLPIHPALIATGNETEQGGQAAIEQLLAL
QPRPSALFVSSAVMATGVLQTLHTQGLRVPDDITVVCFDDVPTAASLNPSMTSLHQPMYDLGATAANVLIELIEGKTPSS
ENTILPISMIVRHENEVWGG
>Mature_339_residues
ASLTIEQIAELAHVSIATVSRVLNNQPHVRAEVRERVLAVMQEHHYTPHAAARTLAGQRPKVIAVFISRTTATIFRNPTF
SHLLQGMTEACNAKGYVLMVSLDSANRADDPATKLLNGRSVDGRIVIPNTINDPLLPQLIADRVPMVLVGKHPLLHHIVS
VDIDHFAGSYQAVHHLLKLGHQSVGMIVGSLHALATHDQIEGYQQAYREAGLPIHPALIATGNETEQGGQAAIEQLLALQ
PRPSALFVSSAVMATGVLQTLHTQGLRVPDDITVVCFDDVPTAASLNPSMTSLHQPMYDLGATAANVLIELIEGKTPSSE
NTILPISMIVRHENEVWGG

Specific function: Transcriptional regulator involved in both the repression of carbohydrate utilization genes such as the alpha- amylase (amyE) and the acetyl-coenzyme A synthetase (acsA); and in the positive regulation of genes involved in excretion of excess carbon such

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787948, Length=315, Percent_Identity=31.7460317460317, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1790369, Length=332, Percent_Identity=29.2168674698795, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1790194, Length=314, Percent_Identity=32.1656050955414, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1787580, Length=333, Percent_Identity=28.5285285285285, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI1789068, Length=314, Percent_Identity=28.343949044586, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1786540, Length=339, Percent_Identity=28.9085545722714, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1789202, Length=295, Percent_Identity=27.1186440677966, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1788474, Length=333, Percent_Identity=27.9279279279279, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787906, Length=347, Percent_Identity=24.207492795389, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI48994940, Length=315, Percent_Identity=23.4920634920635, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1789456, Length=322, Percent_Identity=25.776397515528, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1790689, Length=334, Percent_Identity=25.4491017964072, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1786268, Length=288, Percent_Identity=25, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1790715, Length=318, Percent_Identity=21.6981132075472, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006377
- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 36713; Mature: 36581

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLTIEQIAELAHVSIATVSRVLNNQPHVRAEVRERVLAVMQEHHYTPHAAARTLAGQR
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
PKVIAVFISRTTATIFRNPTFSHLLQGMTEACNAKGYVLMVSLDSANRADDPATKLLNGR
CCEEEEEEEHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCC
SVDGRIVIPNTINDPLLPQLIADRVPMVLVGKHPLLHHIVSVDIDHFAGSYQAVHHLLKL
CCCCEEEECCCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
GHQSVGMIVGSLHALATHDQIEGYQQAYREAGLPIHPALIATGNETEQGGQAAIEQLLAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHC
QPRPSALFVSSAVMATGVLQTLHTQGLRVPDDITVVCFDDVPTAASLNPSMTSLHQPMYD
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCHHHH
LGATAANVLIELIEGKTPSSENTILPISMIVRHENEVWGG
HHHHHHHHHHHHHCCCCCCCCCEEEEHHHEEEECCCCCCC
>Mature Secondary Structure 
ASLTIEQIAELAHVSIATVSRVLNNQPHVRAEVRERVLAVMQEHHYTPHAAARTLAGQR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
PKVIAVFISRTTATIFRNPTFSHLLQGMTEACNAKGYVLMVSLDSANRADDPATKLLNGR
CCEEEEEEEHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCC
SVDGRIVIPNTINDPLLPQLIADRVPMVLVGKHPLLHHIVSVDIDHFAGSYQAVHHLLKL
CCCCEEEECCCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
GHQSVGMIVGSLHALATHDQIEGYQQAYREAGLPIHPALIATGNETEQGGQAAIEQLLAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHC
QPRPSALFVSSAVMATGVLQTLHTQGLRVPDDITVVCFDDVPTAASLNPSMTSLHQPMYD
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCHHHH
LGATAANVLIELIEGKTPSSENTILPISMIVRHENEVWGG
HHHHHHHHHHHHHCCCCCCCCCEEEEHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]