| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896987
Identifier: 159896987
GI number: 159896987
Start: 532245
End: 532679
Strand: Reverse
Name: 159896987
Synonym: Haur_0455
Alternate gene names: NA
Gene position: 532679-532245 (Counterclockwise)
Preceding gene: 159896991
Following gene: 159896986
Centisome position: 8.39
GC content: 49.89
Gene sequence:
>435_bases ATGCCTGTTTTGATTCAATTAACCACTGCCGACCATGGCGGGCGGGTGTCTACCGGCAAATGTGGCACTGCTGAATGTGG CGTGAGTTGTAATTGTGGCTGCCCATATACCGCGATGGAAAGTCGTGGGCGCACCGAAACAATCGAAATCATCGAAGCTC AATATCCCAATCAATGGCTCGGTTTAGTCATTCCACCTGAAGAAGATGAGTTTATGCCTGAGCGAGCGATGTTAGTGGCC CATTCGCACGATGATAACGAAGTCTGGGATGCAATGAGCCGTGTGACTCATAACCAAGTGGTGCATGTCTATTTTAATGG TCAATACAACGCTGATTATGTCGATTGGGCTGATAGCCAACCCGCCAGTTATGGCAGTCGCTTGACCCAAGCCTCACCCT TCGGCGGCGAGATGATTAGCTTGATGCCACTATGA
Upstream 100 bases:
>100_bases TATAGCAGAAATTCATCAATTGCTAGCGATTTGGGCCAGAATAACCCGATTGTGCTATCATGCTGGCTGAGCGTTTGTTC TCAAATTGTGAGTTTAAGCT
Downstream 100 bases:
>100_bases CAATCCAGCAAACCCAACGTTTATTAAAGGTGCAAATCCTTGGGATGCTCGATTACAACGCCGCTTGGGAATTGCAACGC GAATTAGTCAGCCAACGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPVLIQLTTADHGGRVSTGKCGTAECGVSCNCGCPYTAMESRGRTETIEIIEAQYPNQWLGLVIPPEEDEFMPERAMLVA HSHDDNEVWDAMSRVTHNQVVHVYFNGQYNADYVDWADSQPASYGSRLTQASPFGGEMISLMPL
Sequences:
>Translated_144_residues MPVLIQLTTADHGGRVSTGKCGTAECGVSCNCGCPYTAMESRGRTETIEIIEAQYPNQWLGLVIPPEEDEFMPERAMLVA HSHDDNEVWDAMSRVTHNQVVHVYFNGQYNADYVDWADSQPASYGSRLTQASPFGGEMISLMPL >Mature_143_residues PVLIQLTTADHGGRVSTGKCGTAECGVSCNCGCPYTAMESRGRTETIEIIEAQYPNQWLGLVIPPEEDEFMPERAMLVAH SHDDNEVWDAMSRVTHNQVVHVYFNGQYNADYVDWADSQPASYGSRLTQASPFGGEMISLMPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15901; Mature: 15770
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLIQLTTADHGGRVSTGKCGTAECGVSCNCGCPYTAMESRGRTETIEIIEAQYPNQWL CCEEEEEEECCCCCEECCCCCCCCCCCEEECCCCCCHHHHCCCCEEEEEEEECCCCCCEE GLVIPPEEDEFMPERAMLVAHSHDDNEVWDAMSRVTHNQVVHVYFNGQYNADYVDWADSQ EEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCEECCCEEECCCCC PASYGSRLTQASPFGGEMISLMPL CCCCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure PVLIQLTTADHGGRVSTGKCGTAECGVSCNCGCPYTAMESRGRTETIEIIEAQYPNQWL CEEEEEEECCCCCEECCCCCCCCCCCEEECCCCCCHHHHCCCCEEEEEEEECCCCCCEE GLVIPPEEDEFMPERAMLVAHSHDDNEVWDAMSRVTHNQVVHVYFNGQYNADYVDWADSQ EEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCEECCCEEECCCCC PASYGSRLTQASPFGGEMISLMPL CCCCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA