| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is pckG [H]
Identifier: 159896961
GI number: 159896961
Start: 500418
End: 502247
Strand: Reverse
Name: pckG [H]
Synonym: Haur_0429
Alternate gene names: 159896961
Gene position: 502247-500418 (Counterclockwise)
Preceding gene: 159896969
Following gene: 159896950
Centisome position: 7.91
GC content: 51.2
Gene sequence:
>1830_bases ATGAACGCACCAGCCTATGTACGCAATCAAGAACTCAAACGTTGGGTCGAAGAAATGGTTGCCTTGTGCAAGCCCGACGA TGTGTATTGGTGTGATGGTTCTGACGAAGAATATGCATTGATGTGTGGGCGCTTGGTTGAGTCTGGAACCTTCGTTCCAT TGAATCCCGAATTACGCCCCAATAGCTATTTAGCCCGTTCAAATCCTTCCGACGTTGCTCGCGTCGAAGATCGCACGTTC ATTTGTAGCTTGAGCAAAGGCGATGCAGGCCCAACCAATAACTGGATGCATCCCAAGGAAATGAAGGAAAAACTGAACGG CTTGTTCGATGGCTCAATGCGTGGCCGCACCATGTACGTCGTACCATTCAGCATGGGGCCACTTGGCTCGCCAATCGCCC ACATTGGGGTTGAATTGACCGACTCGCCCTATGTTGTGGTCAATATGAAGATTATGACCCGCATGAGCAGCGATGTCTAT GCAGTGTTGGGCGAAACAGGTCACTTTATTCCTTGTTTGCACTCGGTTGGTGCACCACTGCAACCAGGCCAAGCCGATGT TTCGTGGCCGTGTAACGAAAAAGAAAAATATATCGTGCACTTCCCCGAAGAACGTTCGATTTGGTCGTATGGTAGCGGGT ATGGTGGCAATGCTTTGCTTGGCAAGAAATGCTTCGCCCTGCGGATTGCCTCGAATATGGCTCGCGACGAAGGTTGGTTG GCTGAACATATGTTGGTGCTTGGGGTTGAATCGCCAGTTGGTGAAAAAACCTATGTGGCTGCTGCCTTCCCCAGTGCTTG TGGCAAAACCAACTTTGCAATGCTGATTCCACCAACCGCAATGGATGGCTGGAAGGTAACTACGGTTGGCGATGACATTG CTTGGATTAAACCTGGCAAAGATGGCAAATTGTATGCAATCAATCCAGAAAGCGGCTATTTTGGCGTAGCTCCAGGCACG TCCGAGGACACCAATCCAAACGCAATGGCTGCCTTGAGCAAAAATACGATCTTTACCAACGTTGCGCTCACGCCTGAAGG TGATATTTGGTGGGAAGGTATGACCAAAACCCCACCAGCCAAGGCAATCGACTGGACGGGCCAAGAATGGACTCCTGATT GTGGCCGTAAAGCAGCTCACGCTAATGCCCGCTTTACCGCACCAGCCAGCCAATGTCCAAGCATCGACCCAGCTTGGGAA GACCCCCAAGGCGTGCCGATTGAAGCCTTTATCTTTGGTGGTCGCCGTAGCACCTTGATGCCATTGGTCTACCAAGCCTT CAACTGGACATATGGGGTCTATCAAGCAGCAACCATGGGATCGGAAACCACGGCAGCAGCAATGTCGGCAGTTGGCGAAG TACGCCGCGACCCAATGGCAATGCTTCCATTCGTGGGCTACCATATGGCCGACTACTTCAACCACTGGTTGCAGTTTGGC CGCACCATTCCAAACCCACCACGGATCTTCAGTGTCAACTGGTTCCGTAAAGACAAAAATGGCAAGTTCTTGTGGCCAGG CTTCGGCGAAAATATGCGGGTGCTCAAATGGGTGGTCGAACGTGCTCACGGCCACGCAGTCGCCATCGAAAGCCCAATCG GCTGGATGCCACGCTACCAAGACCTTGATTGGAGTGGCCTCAACTTCAGCGAAGACCAATTTCACGAGTTGATGTCGGTT GATCGCGACGATTGGAATAAGGAAATTCTTTCGCACGAAGAATTGTTTATCAAACTTTACGACCGCTTGCCAAAAGAATT TCTCTCGATTCGCGAGCTGATTCTTTCAAGCCTGTGGCGGTCACCCGAACACTGGGAAGCGTTCGAATAA
Upstream 100 bases:
>100_bases AAGTTTAGCAGTGGGCTGGTATTCTATAGACAGGTTCGCGATGGCGTGCAGGGGGTTCACAGAAAACCCGACATCGCGAA GCATTGGAGGAATCAGTATT
Downstream 100 bases:
>100_bases GCGTTGGCTTGATCAGCCATAATCCTAATCGTCAAAGGCGGTTGCAAGCAAACTTGCAACCGCCTTTGTTATCAGCGAGA CGAGAATACTACCAACGATT
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 609; Mature: 609
Protein sequence:
>609_residues MNAPAYVRNQELKRWVEEMVALCKPDDVYWCDGSDEEYALMCGRLVESGTFVPLNPELRPNSYLARSNPSDVARVEDRTF ICSLSKGDAGPTNNWMHPKEMKEKLNGLFDGSMRGRTMYVVPFSMGPLGSPIAHIGVELTDSPYVVVNMKIMTRMSSDVY AVLGETGHFIPCLHSVGAPLQPGQADVSWPCNEKEKYIVHFPEERSIWSYGSGYGGNALLGKKCFALRIASNMARDEGWL AEHMLVLGVESPVGEKTYVAAAFPSACGKTNFAMLIPPTAMDGWKVTTVGDDIAWIKPGKDGKLYAINPESGYFGVAPGT SEDTNPNAMAALSKNTIFTNVALTPEGDIWWEGMTKTPPAKAIDWTGQEWTPDCGRKAAHANARFTAPASQCPSIDPAWE DPQGVPIEAFIFGGRRSTLMPLVYQAFNWTYGVYQAATMGSETTAAAMSAVGEVRRDPMAMLPFVGYHMADYFNHWLQFG RTIPNPPRIFSVNWFRKDKNGKFLWPGFGENMRVLKWVVERAHGHAVAIESPIGWMPRYQDLDWSGLNFSEDQFHELMSV DRDDWNKEILSHEELFIKLYDRLPKEFLSIRELILSSLWRSPEHWEAFE
Sequences:
>Translated_609_residues MNAPAYVRNQELKRWVEEMVALCKPDDVYWCDGSDEEYALMCGRLVESGTFVPLNPELRPNSYLARSNPSDVARVEDRTF ICSLSKGDAGPTNNWMHPKEMKEKLNGLFDGSMRGRTMYVVPFSMGPLGSPIAHIGVELTDSPYVVVNMKIMTRMSSDVY AVLGETGHFIPCLHSVGAPLQPGQADVSWPCNEKEKYIVHFPEERSIWSYGSGYGGNALLGKKCFALRIASNMARDEGWL AEHMLVLGVESPVGEKTYVAAAFPSACGKTNFAMLIPPTAMDGWKVTTVGDDIAWIKPGKDGKLYAINPESGYFGVAPGT SEDTNPNAMAALSKNTIFTNVALTPEGDIWWEGMTKTPPAKAIDWTGQEWTPDCGRKAAHANARFTAPASQCPSIDPAWE DPQGVPIEAFIFGGRRSTLMPLVYQAFNWTYGVYQAATMGSETTAAAMSAVGEVRRDPMAMLPFVGYHMADYFNHWLQFG RTIPNPPRIFSVNWFRKDKNGKFLWPGFGENMRVLKWVVERAHGHAVAIESPIGWMPRYQDLDWSGLNFSEDQFHELMSV DRDDWNKEILSHEELFIKLYDRLPKEFLSIRELILSSLWRSPEHWEAFE >Mature_609_residues MNAPAYVRNQELKRWVEEMVALCKPDDVYWCDGSDEEYALMCGRLVESGTFVPLNPELRPNSYLARSNPSDVARVEDRTF ICSLSKGDAGPTNNWMHPKEMKEKLNGLFDGSMRGRTMYVVPFSMGPLGSPIAHIGVELTDSPYVVVNMKIMTRMSSDVY AVLGETGHFIPCLHSVGAPLQPGQADVSWPCNEKEKYIVHFPEERSIWSYGSGYGGNALLGKKCFALRIASNMARDEGWL AEHMLVLGVESPVGEKTYVAAAFPSACGKTNFAMLIPPTAMDGWKVTTVGDDIAWIKPGKDGKLYAINPESGYFGVAPGT SEDTNPNAMAALSKNTIFTNVALTPEGDIWWEGMTKTPPAKAIDWTGQEWTPDCGRKAAHANARFTAPASQCPSIDPAWE DPQGVPIEAFIFGGRRSTLMPLVYQAFNWTYGVYQAATMGSETTAAAMSAVGEVRRDPMAMLPFVGYHMADYFNHWLQFG RTIPNPPRIFSVNWFRKDKNGKFLWPGFGENMRVLKWVVERAHGHAVAIESPIGWMPRYQDLDWSGLNFSEDQFHELMSV DRDDWNKEILSHEELFIKLYDRLPKEFLSIRELILSSLWRSPEHWEAFE
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI66346721, Length=597, Percent_Identity=51.2562814070352, Blast_Score=592, Evalue=1e-169, Organism=Homo sapiens, GI187281517, Length=603, Percent_Identity=49.4195688225539, Blast_Score=583, Evalue=1e-166, Organism=Homo sapiens, GI66346723, Length=377, Percent_Identity=53.315649867374, Blast_Score=391, Evalue=1e-108, Organism=Caenorhabditis elegans, GI71989645, Length=572, Percent_Identity=49.6503496503497, Blast_Score=569, Evalue=1e-162, Organism=Caenorhabditis elegans, GI71989658, Length=572, Percent_Identity=49.6503496503497, Blast_Score=568, Evalue=1e-162, Organism=Caenorhabditis elegans, GI17555492, Length=583, Percent_Identity=49.2281303602058, Blast_Score=568, Evalue=1e-162, Organism=Caenorhabditis elegans, GI71989653, Length=559, Percent_Identity=50.2683363148479, Blast_Score=560, Evalue=1e-160, Organism=Caenorhabditis elegans, GI32564411, Length=554, Percent_Identity=50.1805054151625, Blast_Score=549, Evalue=1e-156, Organism=Caenorhabditis elegans, GI32564407, Length=504, Percent_Identity=50.9920634920635, Blast_Score=517, Evalue=1e-147, Organism=Caenorhabditis elegans, GI71989649, Length=482, Percent_Identity=50.8298755186722, Blast_Score=494, Evalue=1e-140, Organism=Caenorhabditis elegans, GI32564409, Length=337, Percent_Identity=50.4451038575668, Blast_Score=335, Evalue=4e-92, Organism=Caenorhabditis elegans, GI17540956, Length=525, Percent_Identity=26.0952380952381, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24655085, Length=569, Percent_Identity=52.5483304042179, Blast_Score=596, Evalue=1e-170, Organism=Drosophila melanogaster, GI24655082, Length=585, Percent_Identity=50.9401709401709, Blast_Score=583, Evalue=1e-167, Organism=Drosophila melanogaster, GI161077226, Length=545, Percent_Identity=51.9266055045872, Blast_Score=550, Evalue=1e-156, Organism=Drosophila melanogaster, GI24655088, Length=471, Percent_Identity=54.140127388535, Blast_Score=514, Evalue=1e-146,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 68265; Mature: 68265
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS00505 PEPCK_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPAYVRNQELKRWVEEMVALCKPDDVYWCDGSDEEYALMCGRLVESGTFVPLNPELRP CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCC NSYLARSNPSDVARVEDRTFICSLSKGDAGPTNNWMHPKEMKEKLNGLFDGSMRGRTMYV CCEECCCCCCHHHEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEE VPFSMGPLGSPIAHIGVELTDSPYVVVNMKIMTRMSSDVYAVLGETGHFIPCLHSVGAPL EEECCCCCCCCHHHCCEEECCCCEEEEEEEEEHHCCCCEEEEECCCCCHHHHHHHCCCCC QPGQADVSWPCNEKEKYIVHFPEERSIWSYGSGYGGNALLGKKCFALRIASNMARDEGWL CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHEEHHHHHHCCCCCHH AEHMLVLGVESPVGEKTYVAAAFPSACGKTNFAMLIPPTAMDGWKVTTVGDDIAWIKPGK HHEEEEEECCCCCCCCEEEEEECCHHCCCCCEEEEECCCCCCCEEEEEECCCEEEECCCC DGKLYAINPESGYFGVAPGTSEDTNPNAMAALSKNTIFTNVALTPEGDIWWEGMTKTPPA CCEEEEECCCCCEEECCCCCCCCCCCCCEEEEECCEEEEEEEECCCCCEEECCCCCCCCC KAIDWTGQEWTPDCGRKAAHANARFTAPASQCPSIDPAWEDPQGVPIEAFIFGGRRSTLM CEEECCCCCCCCCCCCHHHCCCCEECCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHH PLVYQAFNWTYGVYQAATMGSETTAAAMSAVGEVRRDPMAMLPFVGYHMADYFNHWLQFG HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC RTIPNPPRIFSVNWFRKDKNGKFLWPGFGENMRVLKWVVERAHGHAVAIESPIGWMPRYQ CCCCCCCCEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCC DLDWSGLNFSEDQFHELMSVDRDDWNKEILSHEELFIKLYDRLPKEFLSIRELILSSLWR CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPEHWEAFE CCCCCCCCC >Mature Secondary Structure MNAPAYVRNQELKRWVEEMVALCKPDDVYWCDGSDEEYALMCGRLVESGTFVPLNPELRP CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCC NSYLARSNPSDVARVEDRTFICSLSKGDAGPTNNWMHPKEMKEKLNGLFDGSMRGRTMYV CCEECCCCCCHHHEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEE VPFSMGPLGSPIAHIGVELTDSPYVVVNMKIMTRMSSDVYAVLGETGHFIPCLHSVGAPL EEECCCCCCCCHHHCCEEECCCCEEEEEEEEEHHCCCCEEEEECCCCCHHHHHHHCCCCC QPGQADVSWPCNEKEKYIVHFPEERSIWSYGSGYGGNALLGKKCFALRIASNMARDEGWL CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHEEHHHHHHCCCCCHH AEHMLVLGVESPVGEKTYVAAAFPSACGKTNFAMLIPPTAMDGWKVTTVGDDIAWIKPGK HHEEEEEECCCCCCCCEEEEEECCHHCCCCCEEEEECCCCCCCEEEEEECCCEEEECCCC DGKLYAINPESGYFGVAPGTSEDTNPNAMAALSKNTIFTNVALTPEGDIWWEGMTKTPPA CCEEEEECCCCCEEECCCCCCCCCCCCCEEEEECCEEEEEEEECCCCCEEECCCCCCCCC KAIDWTGQEWTPDCGRKAAHANARFTAPASQCPSIDPAWEDPQGVPIEAFIFGGRRSTLM CEEECCCCCCCCCCCCHHHCCCCEECCCHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHH PLVYQAFNWTYGVYQAATMGSETTAAAMSAVGEVRRDPMAMLPFVGYHMADYFNHWLQFG HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC RTIPNPPRIFSVNWFRKDKNGKFLWPGFGENMRVLKWVVERAHGHAVAIESPIGWMPRYQ CCCCCCCCEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCC DLDWSGLNFSEDQFHELMSVDRDDWNKEILSHEELFIKLYDRLPKEFLSIRELILSSLWR CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPEHWEAFE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA