| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896950
Identifier: 159896950
GI number: 159896950
Start: 486955
End: 488607
Strand: Reverse
Name: 159896950
Synonym: Haur_0418
Alternate gene names: NA
Gene position: 488607-486955 (Counterclockwise)
Preceding gene: 159896961
Following gene: 159896949
Centisome position: 7.7
GC content: 52.93
Gene sequence:
>1653_bases ATGGCTCAGGCTGTGCTACCATGCCGCACTATGGAGATGCAAAACTTGCCACCAAGTGGCCCACCAACTCAACGAGCAAG GTTGCTCACCGCCCTACGTTCAAGTCGTGCGATGCAAAAAATTCGTCAATACCAGACCGTCTTGTTGGCTGGTACGTTCT TTGTTTTAGCTGCAATTTTTGGTCTCAATTCGCAATCGACGATCGAATCGCCCTCTGGTGCGGCTAGTCCGACAAGTTTG GCTCAGGCAACTTTAGCTCCAGCTGATGGTTCAATTACGCCAACCGTGGCAACCAGCACCGAAGTTGCCAATCTACGCCC AACACCCACCGATGTGGCGGGTGTGGTCGGGCCGCCAGCGCCTAATCGGGCAACGCCAACCAATGAGGGTGCGTATCCTC CGCCAGTTGGTCAAGGGCCAACTTCGACGGTTGATCCGTTTCCAACCTTGCCAGTTGGTGGCACGACGATTCCACCATTC CCAACCAGTAGTACGGGCAATCGTGGCACGGCTGCGCCAACCCAAAGTTCGGGCGGTTATCCTACGCCAAGTTCAAATAG TGCAACTCCAGCCCCAACCAATATTCCGGTGGCAACCGATGAATTACCCTTCCCAACCGAGGAGGGCGAAGATCCAAAGC CAACCGAAGATCCATTTGAAGAAACTCCCAGTGCAACCGAGGAGCCGTTTGAAACCCCAACCACCACGCCAACCGAAGGG CCAACCGCGACCCCAACCAATACGCCAACGCCGACACCATTGCCTTACGATCTGATTCGTGGCAATACGCGCTGGACATT GGCTCAAAGCCCAGTCAGAATTCGCCGCGATACGATCATCGCCAAAGGCGCAAGCTTGACGATTGATGATGGTGTGGAAG TATTGCTCGATGCCAATACATCGTTGGTGGTTGATGGAACATTGACTGCTAATGCAGCTCGTTTCCGCAAGAGCGGCAAC AGTTTCTGGAAATCGATCGTGGTTAATAATGGTGGCCAAGCAAATCTGAATTGGGTTGATATGCGCGGCGGTGGCTCCGA AGGCGTGTTGATTTCAGCCCTTGGTGGCAATACGGTCATCCAAGATAGCGTCTTTGAAGAGAACAAAGGCCGCATCTATA TTAGCGGTGGCAACTTTGATATGCAACGCAGCCGCGTAGTTGGCTTTGCTCCAATCAGCGCCGAAGTGCGTGGCGGCAAG AGCCTGCGCTTATTCAGTAATGTGATTAACAATACAGCCACCGATGGCGCAACTGGCGTGAGTTTGAGCGCAACCGCCGA TGATGTGGAAATTGTCTTGGAGAAGAACAGTTTCCGTGGTAGTAGCGGTACGAACGTTCGCGCCCAATTCAATCAATCAT TGAATGCTGTGTTTCAGTGCAATAGCTTTAGCGGCGGAGCCTATGGCCTGCAAATCAAATCAACTGACCCAACCTTAGAT GGTTCACGGATTTTGATTAGCGGCAATAGCTTCCAAAGCCACAAAAACTATGGCCTAACTGGCGATGTTGGCTTTGATGC CCGCAACAACTGGTGGGGCGATGCCTCAGGCCCATATCATCCTGAGCAGAATGGCGCTGGCACCGGCGATGCGGTTGGGG TCAATTTGACCTTCAGTCCATGGCTGAACGCCAAACCAAGTTGCGCTCCTTAA
Upstream 100 bases:
>100_bases ATGGTTAAATCTTGTAGGGTCTGAGTGTACCATAGACATAATCAACGGGCAACTTAGGCCAAAAGTACCCCCCTATTTCT CAGCGAATCTTCATTGCACG
Downstream 100 bases:
>100_bases AGATTTTTATGTCAACAGCCTCAGTTTTGTAACTGGGGCTGTTTTTATTTGGGAGCATGACTATGGAATGGCAAAAGGGT GACTATACAATCAGCACTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MAQAVLPCRTMEMQNLPPSGPPTQRARLLTALRSSRAMQKIRQYQTVLLAGTFFVLAAIFGLNSQSTIESPSGAASPTSL AQATLAPADGSITPTVATSTEVANLRPTPTDVAGVVGPPAPNRATPTNEGAYPPPVGQGPTSTVDPFPTLPVGGTTIPPF PTSSTGNRGTAAPTQSSGGYPTPSSNSATPAPTNIPVATDELPFPTEEGEDPKPTEDPFEETPSATEEPFETPTTTPTEG PTATPTNTPTPTPLPYDLIRGNTRWTLAQSPVRIRRDTIIAKGASLTIDDGVEVLLDANTSLVVDGTLTANAARFRKSGN SFWKSIVVNNGGQANLNWVDMRGGGSEGVLISALGGNTVIQDSVFEENKGRIYISGGNFDMQRSRVVGFAPISAEVRGGK SLRLFSNVINNTATDGATGVSLSATADDVEIVLEKNSFRGSSGTNVRAQFNQSLNAVFQCNSFSGGAYGLQIKSTDPTLD GSRILISGNSFQSHKNYGLTGDVGFDARNNWWGDASGPYHPEQNGAGTGDAVGVNLTFSPWLNAKPSCAP
Sequences:
>Translated_550_residues MAQAVLPCRTMEMQNLPPSGPPTQRARLLTALRSSRAMQKIRQYQTVLLAGTFFVLAAIFGLNSQSTIESPSGAASPTSL AQATLAPADGSITPTVATSTEVANLRPTPTDVAGVVGPPAPNRATPTNEGAYPPPVGQGPTSTVDPFPTLPVGGTTIPPF PTSSTGNRGTAAPTQSSGGYPTPSSNSATPAPTNIPVATDELPFPTEEGEDPKPTEDPFEETPSATEEPFETPTTTPTEG PTATPTNTPTPTPLPYDLIRGNTRWTLAQSPVRIRRDTIIAKGASLTIDDGVEVLLDANTSLVVDGTLTANAARFRKSGN SFWKSIVVNNGGQANLNWVDMRGGGSEGVLISALGGNTVIQDSVFEENKGRIYISGGNFDMQRSRVVGFAPISAEVRGGK SLRLFSNVINNTATDGATGVSLSATADDVEIVLEKNSFRGSSGTNVRAQFNQSLNAVFQCNSFSGGAYGLQIKSTDPTLD GSRILISGNSFQSHKNYGLTGDVGFDARNNWWGDASGPYHPEQNGAGTGDAVGVNLTFSPWLNAKPSCAP >Mature_549_residues AQAVLPCRTMEMQNLPPSGPPTQRARLLTALRSSRAMQKIRQYQTVLLAGTFFVLAAIFGLNSQSTIESPSGAASPTSLA QATLAPADGSITPTVATSTEVANLRPTPTDVAGVVGPPAPNRATPTNEGAYPPPVGQGPTSTVDPFPTLPVGGTTIPPFP TSSTGNRGTAAPTQSSGGYPTPSSNSATPAPTNIPVATDELPFPTEEGEDPKPTEDPFEETPSATEEPFETPTTTPTEGP TATPTNTPTPTPLPYDLIRGNTRWTLAQSPVRIRRDTIIAKGASLTIDDGVEVLLDANTSLVVDGTLTANAARFRKSGNS FWKSIVVNNGGQANLNWVDMRGGGSEGVLISALGGNTVIQDSVFEENKGRIYISGGNFDMQRSRVVGFAPISAEVRGGKS LRLFSNVINNTATDGATGVSLSATADDVEIVLEKNSFRGSSGTNVRAQFNQSLNAVFQCNSFSGGAYGLQIKSTDPTLDG SRILISGNSFQSHKNYGLTGDVGFDARNNWWGDASGPYHPEQNGAGTGDAVGVNLTFSPWLNAKPSCAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57324; Mature: 57193
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00449 ATPASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQAVLPCRTMEMQNLPPSGPPTQRARLLTALRSSRAMQKIRQYQTVLLAGTFFVLAAIF CCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLNSQSTIESPSGAASPTSLAQATLAPADGSITPTVATSTEVANLRPTPTDVAGVVGPPA CCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCC PNRATPTNEGAYPPPVGQGPTSTVDPFPTLPVGGTTIPPFPTSSTGNRGTAAPTQSSGGY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTPSSNSATPAPTNIPVATDELPFPTEEGEDPKPTEDPFEETPSATEEPFETPTTTPTEG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC PTATPTNTPTPTPLPYDLIRGNTRWTLAQSPVRIRRDTIIAKGASLTIDDGVEVLLDANT CCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCEEECEEEEECCCEEEECCCEEEEEECCC SLVVDGTLTANAARFRKSGNSFWKSIVVNNGGQANLNWVDMRGGGSEGVLISALGGNTVI EEEEECCCCCCHHHHHHCCHHEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCEEE QDSVFEENKGRIYISGGNFDMQRSRVVGFAPISAEVRGGKSLRLFSNVINNTATDGATGV ECCCEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCE SLSATADDVEIVLEKNSFRGSSGTNVRAQFNQSLNAVFQCNSFSGGAYGLQIKSTDPTLD EEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCC GSRILISGNSFQSHKNYGLTGDVGFDARNNWWGDASGPYHPEQNGAGTGDAVGVNLTFSP CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC WLNAKPSCAP CCCCCCCCCC >Mature Secondary Structure AQAVLPCRTMEMQNLPPSGPPTQRARLLTALRSSRAMQKIRQYQTVLLAGTFFVLAAIF CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLNSQSTIESPSGAASPTSLAQATLAPADGSITPTVATSTEVANLRPTPTDVAGVVGPPA CCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCC PNRATPTNEGAYPPPVGQGPTSTVDPFPTLPVGGTTIPPFPTSSTGNRGTAAPTQSSGGY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTPSSNSATPAPTNIPVATDELPFPTEEGEDPKPTEDPFEETPSATEEPFETPTTTPTEG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC PTATPTNTPTPTPLPYDLIRGNTRWTLAQSPVRIRRDTIIAKGASLTIDDGVEVLLDANT CCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCEEECEEEEECCCEEEECCCEEEEEECCC SLVVDGTLTANAARFRKSGNSFWKSIVVNNGGQANLNWVDMRGGGSEGVLISALGGNTVI EEEEECCCCCCHHHHHHCCHHEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCEEE QDSVFEENKGRIYISGGNFDMQRSRVVGFAPISAEVRGGKSLRLFSNVINNTATDGATGV ECCCEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCE SLSATADDVEIVLEKNSFRGSSGTNVRAQFNQSLNAVFQCNSFSGGAYGLQIKSTDPTLD EEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCC GSRILISGNSFQSHKNYGLTGDVGFDARNNWWGDASGPYHPEQNGAGTGDAVGVNLTFSP CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC WLNAKPSCAP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA