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The map label for this gene is 159896935

Identifier: 159896935

GI number: 159896935

Start: 474076

End: 474663

Strand: Reverse

Name: 159896935

Synonym: Haur_0403

Alternate gene names: NA

Gene position: 474663-474076 (Counterclockwise)

Preceding gene: 159896937

Following gene: 159896934

Centisome position: 7.48

GC content: 48.81

Gene sequence:

>588_bases
ATGTTGGGAAACGTGGTTAAAGTTGACCCGCGCACCAAGCGCACCCGTAAATTAATTCTTGATGCTTTGATTCAACTCTT
GCGCACCCATACCTTCGAGGAAGTCACGGTCAATGAGATTGCCGAAGCAGCAACGATCAATCGTGCAACCTTTTATGCCC
ATTTCAGCGATAAATATGCCTTGGTCGATGAGCTAATTCGTGATGGCTTTATGCTGTATCTTGATCGACGCATGCAGCAT
TATCCTGATACGCCGACGCGCTATATGCAAGCTTTGCTCTGGGCGATCGCCGACCACTGGGCGATGATCCATGGTCAATG
CAATCAATATCATCGCTTTTTCGATTCGCTGGCCGAAAATCAGATCAAACGCATGCTGGAGCAGCATATTCAAACTTGGC
TTGATCATTATGGGCCGCTGCGCAACGTGCCAGCCATGCAACGCCAATTATTAGCAACCATGCTGAGTTGGTCGGTCTAT
GCTTTGGTTGCCCGCTGGCTGTATAGCGACCGCTGCCAAAACCTCGAACATTTTATCAATGATAGCGTGCCCTTGCTGGT
TGGCAGTATCGAAGCGTTGAAAGGATGA

Upstream 100 bases:

>100_bases
CGTTGTTTAATTGACATCTGTTGAATAGCATAAAGAAGCCGTGGTATAGTGTCAACCAGCAAAAACCAAAATTTGTTGTT
TAGGCAACAAAGGAGCCAAA

Downstream 100 bases:

>100_bases
ATTATGAGGGATGAAGGATGAAGAGCTACATCAGAAGGCAAACATCAAAAGGTTAGATAGTAGAGGGTTTAGGATTCAAT
GGGGTATTGCGATCGCCTAT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR Family Protein

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MLGNVVKVDPRTKRTRKLILDALIQLLRTHTFEEVTVNEIAEAATINRATFYAHFSDKYALVDELIRDGFMLYLDRRMQH
YPDTPTRYMQALLWAIADHWAMIHGQCNQYHRFFDSLAENQIKRMLEQHIQTWLDHYGPLRNVPAMQRQLLATMLSWSVY
ALVARWLYSDRCQNLEHFINDSVPLLVGSIEALKG

Sequences:

>Translated_195_residues
MLGNVVKVDPRTKRTRKLILDALIQLLRTHTFEEVTVNEIAEAATINRATFYAHFSDKYALVDELIRDGFMLYLDRRMQH
YPDTPTRYMQALLWAIADHWAMIHGQCNQYHRFFDSLAENQIKRMLEQHIQTWLDHYGPLRNVPAMQRQLLATMLSWSVY
ALVARWLYSDRCQNLEHFINDSVPLLVGSIEALKG
>Mature_195_residues
MLGNVVKVDPRTKRTRKLILDALIQLLRTHTFEEVTVNEIAEAATINRATFYAHFSDKYALVDELIRDGFMLYLDRRMQH
YPDTPTRYMQALLWAIADHWAMIHGQCNQYHRFFDSLAENQIKRMLEQHIQTWLDHYGPLRNVPAMQRQLLATMLSWSVY
ALVARWLYSDRCQNLEHFINDSVPLLVGSIEALKG

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22935; Mature: 22935

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGNVVKVDPRTKRTRKLILDALIQLLRTHTFEEVTVNEIAEAATINRATFYAHFSDKYA
CCCCCEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEHHCCHHH
LVDELIRDGFMLYLDRRMQHYPDTPTRYMQALLWAIADHWAMIHGQCNQYHRFFDSLAEN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIKRMLEQHIQTWLDHYGPLRNVPAMQRQLLATMLSWSVYALVARWLYSDRCQNLEHFIN
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DSVPLLVGSIEALKG
CCHHHHHHHHHHHCC
>Mature Secondary Structure
MLGNVVKVDPRTKRTRKLILDALIQLLRTHTFEEVTVNEIAEAATINRATFYAHFSDKYA
CCCCCEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEHHCCHHH
LVDELIRDGFMLYLDRRMQHYPDTPTRYMQALLWAIADHWAMIHGQCNQYHRFFDSLAEN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIKRMLEQHIQTWLDHYGPLRNVPAMQRQLLATMLSWSVYALVARWLYSDRCQNLEHFIN
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DSVPLLVGSIEALKG
CCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA