| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896906
Identifier: 159896906
GI number: 159896906
Start: 447370
End: 448671
Strand: Reverse
Name: 159896906
Synonym: Haur_0374
Alternate gene names: NA
Gene position: 448671-447370 (Counterclockwise)
Preceding gene: 159896907
Following gene: 159896905
Centisome position: 7.07
GC content: 51.92
Gene sequence:
>1302_bases GTGAGCATCAGCGATGTGTTGACTATGGGCTACCATTTTGGGCAGGCACGTTGGCGGTGGCAACGGCTGAATGCCGAGCG CTTACCAGCCTTTCAAGCTACCAAAGCACGCCAATTGATTGCTTGGGTTGCCCAACATTCAGCCTTCTATCGCCAGCATT GGCAGGGCCATGACCTTAATGATTGGCGCAATTTGCCAGCCGTCGATAAAGGCTTGATGATGGCCAATTTTCGTGAATTC AACACCTTGCAAGTGCCAACCGCAGCGGCCTTCGATTTGGCCCAACAAGCCGAGCAACAACGTGATTTTGTGCCACGTTT GGGCAATCTGACGGTCGGGCTTTCGTCGGGCACATCGGGGCATCGCGGCTTATTTTTGGTGAGTGCCGCCGAGCAATTGC TGTGGGCGGGCACGATTTTAGGTCGCACGTTACACCAAATCAAGCCCACCAAAATCGCCTTTTTTTTACGCGCCAACAGC AATCTCTATCAACAGCTGGGCGGGCGGCTGATTCAATTTCGCTATTTCGACTTGACCCAAGCCTTAGCAGGCCACATTCA AGTGCTCAACGACTATCGACCGACGATTATCGTAGCTCCACCAGCCTTGTTGCTGCAATTGCTAGCAGCGGCCCAAAACG GCCAATTGACTCATCGGCCTGAACGAATTATTAGTGTCGCCGATGCCTTGGCTAGCGACGAACAGCAACAACTCAGCAAC TACTTTGGCATTCCAATTGAGCAAATCTACCAAGCAACCGAAGGTTTACTGGGTATTTCGTGCGCTCACGGCAATTTGCA CCTCCAAGAAGATATTGTGGCGGTTGATTTTGAGGATTTAGGGCAAGGCCGCGTTACGCCGTATATCACCGATTTATGGC GACGCACTCAGCCGATTATTCGCTATCGTTTAAATGATGTGTTGCGGTTGAGTGCGCAGCCGTGTCGCTGTGGCAGCGCC TTTGCGGTGATTGAGCAAATCGAGGGGCGGCGTGATGATCTCTGTTATTTTACCTGCCACGGCCAGCGCCAAGCGATTTT TCCTGATAGTTTGCGCCGCGCTATACTCTTGGCGCATTCGGCCATCCAAGAATATCAAATCACCCAAACCCACGACGATC AACTTACGATCACCTTGATGCTGGCGACGGCGGCTGATACGGCGACGGTTGGAGCAGCAGTTGAGCAGCAAATTAAACTG CATCTGGCGGATTATGGTTGTACGAATTGCCAACTGAGCATTGGTTTTGCGCCAATCGAGTATGGCTTGGTCAATAAACG TCGTCGGGTAATTCGCCAATGA
Upstream 100 bases:
>100_bases CAACGTTGGCCCGTTTGAGCGCCTTCGCCCAAGCCTACCCCGAGGTGTTGATTGTGCCCTGCCATTGCCCAGAAATCTAT GCCAACGAGGTTGCGACGGC
Downstream 100 bases:
>100_bases ACTATTGTATCTTGGCGCTTGGTTCGCGCGGCGATGTGCAGCCGTTTATCGCCTTGGCGCTTGGGTTGCAAACTGAGGGT CATCAGGTCGTTATCGCCGC
Product: putative adenylate-forming protein
Products: NA
Alternate protein names: Co Synthetase; AMP-Dependent Synthetase And Ligase
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MSISDVLTMGYHFGQARWRWQRLNAERLPAFQATKARQLIAWVAQHSAFYRQHWQGHDLNDWRNLPAVDKGLMMANFREF NTLQVPTAAAFDLAQQAEQQRDFVPRLGNLTVGLSSGTSGHRGLFLVSAAEQLLWAGTILGRTLHQIKPTKIAFFLRANS NLYQQLGGRLIQFRYFDLTQALAGHIQVLNDYRPTIIVAPPALLLQLLAAAQNGQLTHRPERIISVADALASDEQQQLSN YFGIPIEQIYQATEGLLGISCAHGNLHLQEDIVAVDFEDLGQGRVTPYITDLWRRTQPIIRYRLNDVLRLSAQPCRCGSA FAVIEQIEGRRDDLCYFTCHGQRQAIFPDSLRRAILLAHSAIQEYQITQTHDDQLTITLMLATAADTATVGAAVEQQIKL HLADYGCTNCQLSIGFAPIEYGLVNKRRRVIRQ
Sequences:
>Translated_433_residues MSISDVLTMGYHFGQARWRWQRLNAERLPAFQATKARQLIAWVAQHSAFYRQHWQGHDLNDWRNLPAVDKGLMMANFREF NTLQVPTAAAFDLAQQAEQQRDFVPRLGNLTVGLSSGTSGHRGLFLVSAAEQLLWAGTILGRTLHQIKPTKIAFFLRANS NLYQQLGGRLIQFRYFDLTQALAGHIQVLNDYRPTIIVAPPALLLQLLAAAQNGQLTHRPERIISVADALASDEQQQLSN YFGIPIEQIYQATEGLLGISCAHGNLHLQEDIVAVDFEDLGQGRVTPYITDLWRRTQPIIRYRLNDVLRLSAQPCRCGSA FAVIEQIEGRRDDLCYFTCHGQRQAIFPDSLRRAILLAHSAIQEYQITQTHDDQLTITLMLATAADTATVGAAVEQQIKL HLADYGCTNCQLSIGFAPIEYGLVNKRRRVIRQ >Mature_432_residues SISDVLTMGYHFGQARWRWQRLNAERLPAFQATKARQLIAWVAQHSAFYRQHWQGHDLNDWRNLPAVDKGLMMANFREFN TLQVPTAAAFDLAQQAEQQRDFVPRLGNLTVGLSSGTSGHRGLFLVSAAEQLLWAGTILGRTLHQIKPTKIAFFLRANSN LYQQLGGRLIQFRYFDLTQALAGHIQVLNDYRPTIIVAPPALLLQLLAAAQNGQLTHRPERIISVADALASDEQQQLSNY FGIPIEQIYQATEGLLGISCAHGNLHLQEDIVAVDFEDLGQGRVTPYITDLWRRTQPIIRYRLNDVLRLSAQPCRCGSAF AVIEQIEGRRDDLCYFTCHGQRQAIFPDSLRRAILLAHSAIQEYQITQTHDDQLTITLMLATAADTATVGAAVEQQIKLH LADYGCTNCQLSIGFAPIEYGLVNKRRRVIRQ
Specific function: Unknown
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48781; Mature: 48650
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: PS00539 PYROKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISDVLTMGYHFGQARWRWQRLNAERLPAFQATKARQLIAWVAQHSAFYRQHWQGHDLN CCHHHHHHHHHHHCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DWRNLPAVDKGLMMANFREFNTLQVPTAAAFDLAQQAEQQRDFVPRLGNLTVGLSSGTSG HHHCCCCHHCCHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC HRGLFLVSAAEQLLWAGTILGRTLHQIKPTKIAFFLRANSNLYQQLGGRLIQFRYFDLTQ CCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCCCEEEEEEHHHHH ALAGHIQVLNDYRPTIIVAPPALLLQLLAAAQNGQLTHRPERIISVADALASDEQQQLSN HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHH YFGIPIEQIYQATEGLLGISCAHGNLHLQEDIVAVDFEDLGQGRVTPYITDLWRRTQPII HCCCCHHHHHHHHCCCEEEEEECCCEEEECCEEEEEHHHCCCCCCCHHHHHHHHHHHHHH RYRLNDVLRLSAQPCRCGSAFAVIEQIEGRRDDLCYFTCHGQRQAIFPDSLRRAILLAHS HHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH AIQEYQITQTHDDQLTITLMLATAADTATVGAAVEQQIKLHLADYGCTNCQLSIGFAPIE HHHHCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHEEEECCCCCCCEEEECCCCHH YGLVNKRRRVIRQ HHHHHHHHHHHCC >Mature Secondary Structure SISDVLTMGYHFGQARWRWQRLNAERLPAFQATKARQLIAWVAQHSAFYRQHWQGHDLN CHHHHHHHHHHHCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DWRNLPAVDKGLMMANFREFNTLQVPTAAAFDLAQQAEQQRDFVPRLGNLTVGLSSGTSG HHHCCCCHHCCHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC HRGLFLVSAAEQLLWAGTILGRTLHQIKPTKIAFFLRANSNLYQQLGGRLIQFRYFDLTQ CCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCCCEEEEEEHHHHH ALAGHIQVLNDYRPTIIVAPPALLLQLLAAAQNGQLTHRPERIISVADALASDEQQQLSN HHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHH YFGIPIEQIYQATEGLLGISCAHGNLHLQEDIVAVDFEDLGQGRVTPYITDLWRRTQPII HCCCCHHHHHHHHCCCEEEEEECCCEEEECCEEEEEHHHCCCCCCCHHHHHHHHHHHHHH RYRLNDVLRLSAQPCRCGSAFAVIEQIEGRRDDLCYFTCHGQRQAIFPDSLRRAILLAHS HHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH AIQEYQITQTHDDQLTITLMLATAADTATVGAAVEQQIKLHLADYGCTNCQLSIGFAPIE HHHHCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHEEEECCCCCCCEEEECCCCHH YGLVNKRRRVIRQ HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA