| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896907
Identifier: 159896907
GI number: 159896907
Start: 448668
End: 449483
Strand: Reverse
Name: 159896907
Synonym: Haur_0375
Alternate gene names: NA
Gene position: 449483-448668 (Counterclockwise)
Preceding gene: 159896908
Following gene: 159896906
Centisome position: 7.08
GC content: 53.06
Gene sequence:
>816_bases ATGCAAGTCAGATTGCTGGATACTGGAATTTGCCGCGTGCCCGAATTTCATGTGCTACGCGATGGCAGTCGCCGCATGCT CGATTGCCATGCGCTTGTGGCCTTGATTGAGCATCCCAAACATGGCTGGGGCTTGTTTGATGTCGGGTATAGCCAAGCGA TGATCAGCGCAACCCAACAGTTGCCGTGGTCGCTCTATCGCCAGGCCACGCCCTTGCAATTATCGCCTGAATTAGAAGTA GTCAATCAATTACCACAGTATGGCTTGAGCGCAGCAGATATTGGTTGGATTGTGCTTTCGCATGCTCACGCCGACCATGT AGCCGCTTTGGCCGATTTTCCGCAAGCCCAAATTTACATGTCAGCCACGGCGTTTGAATTGGTCAGCCAAGTTCAAGGGA TTAACGCCTTGCGACGGGGGATTATTCCCCATTTGTTTCCCCAAGGTTGGCATCAACGGCTGCATTTAATTCATGAATTT CGCGACCAACCACTATTTGCTTTGGGCAACACCCACGATTTATTTGGCGATGGCTTGTTACGGCTGGTCGAATTGCCTGG CCATGCACGAGGCCAAATCGGTATGTATATCGCCAATTCGCGCCCAATCTTGTTGGCAGCAGATGGCGCTTGGCATTCGC GGGCAATTCGCGGGCAAGTGCTGCCCCACCCAATCATCTATTTTATGATCGACGATGCCAAGGCCATGGCCACAACGTTG GCCCGTTTGAGCGCCTTCGCCCAAGCCTACCCCGAGGTGTTGATTGTGCCCTGCCATTGCCCAGAAATCTATGCCAACGA GGTTGCGACGGCGTGA
Upstream 100 bases:
>100_bases AGCCCAACACGATTTGGGTTATCAGCCATTGATCAGCCTTGAAACGGGGATTCAACGCACCATCGCCGCGCTTAAACAAC CAACCAAGGGGGTTTAACTA
Downstream 100 bases:
>100_bases GCATCAGCGATGTGTTGACTATGGGCTACCATTTTGGGCAGGCACGTTGGCGGTGGCAACGGCTGAATGCCGAGCGCTTA CCAGCCTTTCAAGCTACCAA
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Metal Dependent Hydrolase; Beta-Lactamase Domain Protein; Zn-Dependent Hydrolase; Beta-Lactamase Domain-Containing Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Protein
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MQVRLLDTGICRVPEFHVLRDGSRRMLDCHALVALIEHPKHGWGLFDVGYSQAMISATQQLPWSLYRQATPLQLSPELEV VNQLPQYGLSAADIGWIVLSHAHADHVAALADFPQAQIYMSATAFELVSQVQGINALRRGIIPHLFPQGWHQRLHLIHEF RDQPLFALGNTHDLFGDGLLRLVELPGHARGQIGMYIANSRPILLAADGAWHSRAIRGQVLPHPIIYFMIDDAKAMATTL ARLSAFAQAYPEVLIVPCHCPEIYANEVATA
Sequences:
>Translated_271_residues MQVRLLDTGICRVPEFHVLRDGSRRMLDCHALVALIEHPKHGWGLFDVGYSQAMISATQQLPWSLYRQATPLQLSPELEV VNQLPQYGLSAADIGWIVLSHAHADHVAALADFPQAQIYMSATAFELVSQVQGINALRRGIIPHLFPQGWHQRLHLIHEF RDQPLFALGNTHDLFGDGLLRLVELPGHARGQIGMYIANSRPILLAADGAWHSRAIRGQVLPHPIIYFMIDDAKAMATTL ARLSAFAQAYPEVLIVPCHCPEIYANEVATA >Mature_271_residues MQVRLLDTGICRVPEFHVLRDGSRRMLDCHALVALIEHPKHGWGLFDVGYSQAMISATQQLPWSLYRQATPLQLSPELEV VNQLPQYGLSAADIGWIVLSHAHADHVAALADFPQAQIYMSATAFELVSQVQGINALRRGIIPHLFPQGWHQRLHLIHEF RDQPLFALGNTHDLFGDGLLRLVELPGHARGQIGMYIANSRPILLAADGAWHSRAIRGQVLPHPIIYFMIDDAKAMATTL ARLSAFAQAYPEVLIVPCHCPEIYANEVATA
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30132; Mature: 30132
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVRLLDTGICRVPEFHVLRDGSRRMLDCHALVALIEHPKHGWGLFDVGYSQAMISATQQ CEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHH LPWSLYRQATPLQLSPELEVVNQLPQYGLSAADIGWIVLSHAHADHVAALADFPQAQIYM CCHHHHHCCCCCEECCCHHHHHHHHHHCCCHHHHHEEEEECCCHHHHHHHHCCCCCEEEE SATAFELVSQVQGINALRRGIIPHLFPQGWHQRLHLIHEFRDQPLFALGNTHDLFGDGLL HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH RLVELPGHARGQIGMYIANSRPILLAADGAWHSRAIRGQVLPHPIIYFMIDDAKAMATTL HHHHCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHCCCCCCCCEEEEEECCHHHHHHHH ARLSAFAQAYPEVLIVPCHCPEIYANEVATA HHHHHHHHHCCCEEEEECCCCHHHHHHHCCC >Mature Secondary Structure MQVRLLDTGICRVPEFHVLRDGSRRMLDCHALVALIEHPKHGWGLFDVGYSQAMISATQQ CEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHH LPWSLYRQATPLQLSPELEVVNQLPQYGLSAADIGWIVLSHAHADHVAALADFPQAQIYM CCHHHHHCCCCCEECCCHHHHHHHHHHCCCHHHHHEEEEECCCHHHHHHHHCCCCCEEEE SATAFELVSQVQGINALRRGIIPHLFPQGWHQRLHLIHEFRDQPLFALGNTHDLFGDGLL HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH RLVELPGHARGQIGMYIANSRPILLAADGAWHSRAIRGQVLPHPIIYFMIDDAKAMATTL HHHHCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHCCCCCCCCEEEEEECCHHHHHHHH ARLSAFAQAYPEVLIVPCHCPEIYANEVATA HHHHHHHHHCCCEEEEECCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA