| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is fabH [H]
Identifier: 159896904
GI number: 159896904
Start: 445114
End: 446100
Strand: Reverse
Name: fabH [H]
Synonym: Haur_0372
Alternate gene names: 159896904
Gene position: 446100-445114 (Counterclockwise)
Preceding gene: 159896905
Following gene: 159896903
Centisome position: 7.03
GC content: 54.51
Gene sequence:
>987_bases ATGCAGTTTCCTCTGCGCATCGCCGGAATCGGCGCGTACTTACCAGCCACCATTGTTACCACCAGCGAGCTAGCCGAGCG CTTTGGCGTTGATCCAGGCTTAATTGAGCGAATCACGGGCATTCGTGAGCGCCGTTACGCTGGAGCTGAAACTGCCTTGA CCATGGCCACCCAAGCCGCCCAGCAAGCACTAGCCAACGCCAATTATGCGCTTGATAGCATCGATTTAATCGTGGTGGCT TCGGCTGGAATGCATCAAGCCATCCCATGCACGGCGGCCTTATTGCAAAACGCCTTGCAAGCACCAGTGGGCCGTAGCGC CTGCTTCGATTTGAATGCAACCTGTATGAGTTTTATGCTGGCATTGCAATTGTTAGCGCCATTAATTAATAGTGGCGTGT ATCAACGAGTGCTGTTAGTCAGCAGCGAACGGGCTTCAGTTTCGCTCAATCCACATGAATGGGAATCGACAGCGCTATTT GGCGATGCAGCAGCGGCAGTCGTGTTGGAGCGCGGCGATGGCAGCAGCAGCCTGCAACATAGCCAATTTGCCACCTGGAG CAATGGCAGCGATTTGATTCAGGTGCGCGGCGGCGGCACGGCCCAGCATCCCAACGCGGCAGATACCACGCCCGACATGA ATTGGTTTATGATGCAGGGGCCGTTGGCGTTTCGCTTTGTCTTGCGCGAAATGCAGCAGTTTGTTGAACGATTTTTGGCT GAGCTAGGTTGGCAAAATAGTGAAATTGATGCAGTTATTCCCCATCAAGCCAACCGCCATGCGATCGAGCAAGTGCAAGC ACGCTTGGGCTTTCAGCCCGATCAAGTAATTAGCAATCTCGCTACCCGAGGCAATTGCGTTTCGGTATCCGTGCCCTTAG CCTTGGCTGAAGCGGTTGCGGCTGGCCGAATTCAGCGTGGCAACCGCTTGGTGCTGCTTGGCTCTGGCGCTGGAATTACC TTGGGTGCTGTGGCGTTGATTTACTAA
Upstream 100 bases:
>100_bases GCGGCGCAACAACTTGCGACCCAATTAGCCCAAGAGCAAGGCGTAACCAAGGCCATAGCTTGGTTAAAACAACGATTTTG AAATTACACGAGGTAGTGTT
Downstream 100 bases:
>100_bases CTAGGAAATCGCGATGGTTGGGTTGATTACTGGGGCAGGCACGGGCATTGGTCAGGCCATGGCCTTGGCCTTGGCCAAAC GTGGCGCAACCATTATTTTA
Product: beta-ketoacyl-acyl-carrier-protein synthase I
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MQFPLRIAGIGAYLPATIVTTSELAERFGVDPGLIERITGIRERRYAGAETALTMATQAAQQALANANYALDSIDLIVVA SAGMHQAIPCTAALLQNALQAPVGRSACFDLNATCMSFMLALQLLAPLINSGVYQRVLLVSSERASVSLNPHEWESTALF GDAAAAVVLERGDGSSSLQHSQFATWSNGSDLIQVRGGGTAQHPNAADTTPDMNWFMMQGPLAFRFVLREMQQFVERFLA ELGWQNSEIDAVIPHQANRHAIEQVQARLGFQPDQVISNLATRGNCVSVSVPLALAEAVAAGRIQRGNRLVLLGSGAGIT LGAVALIY
Sequences:
>Translated_328_residues MQFPLRIAGIGAYLPATIVTTSELAERFGVDPGLIERITGIRERRYAGAETALTMATQAAQQALANANYALDSIDLIVVA SAGMHQAIPCTAALLQNALQAPVGRSACFDLNATCMSFMLALQLLAPLINSGVYQRVLLVSSERASVSLNPHEWESTALF GDAAAAVVLERGDGSSSLQHSQFATWSNGSDLIQVRGGGTAQHPNAADTTPDMNWFMMQGPLAFRFVLREMQQFVERFLA ELGWQNSEIDAVIPHQANRHAIEQVQARLGFQPDQVISNLATRGNCVSVSVPLALAEAVAAGRIQRGNRLVLLGSGAGIT LGAVALIY >Mature_328_residues MQFPLRIAGIGAYLPATIVTTSELAERFGVDPGLIERITGIRERRYAGAETALTMATQAAQQALANANYALDSIDLIVVA SAGMHQAIPCTAALLQNALQAPVGRSACFDLNATCMSFMLALQLLAPLINSGVYQRVLLVSSERASVSLNPHEWESTALF GDAAAAVVLERGDGSSSLQHSQFATWSNGSDLIQVRGGGTAQHPNAADTTPDMNWFMMQGPLAFRFVLREMQQFVERFLA ELGWQNSEIDAVIPHQANRHAIEQVQARLGFQPDQVISNLATRGNCVSVSVPLALAEAVAAGRIQRGNRLVLLGSGAGIT LGAVALIY
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=322, Percent_Identity=32.6086956521739, Blast_Score=142, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 34969; Mature: 34969
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFPLRIAGIGAYLPATIVTTSELAERFGVDPGLIERITGIRERRYAGAETALTMATQAA CCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QQALANANYALDSIDLIVVASAGMHQAIPCTAALLQNALQAPVGRSACFDLNATCMSFML HHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHH ALQLLAPLINSGVYQRVLLVSSERASVSLNPHEWESTALFGDAAAAVVLERGDGSSSLQH HHHHHHHHHCCHHHHHHHEEECCCCEEECCCCCCCCCEEECCCEEEEEEECCCCCCCCCH SQFATWSNGSDLIQVRGGGTAQHPNAADTTPDMNWFMMQGPLAFRFVLREMQQFVERFLA HHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH ELGWQNSEIDAVIPHQANRHAIEQVQARLGFQPDQVISNLATRGNCVSVSVPLALAEAVA HHCCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHH AGRIQRGNRLVLLGSGAGITLGAVALIY HHHHCCCCEEEEEECCCCHHHHHHHHCC >Mature Secondary Structure MQFPLRIAGIGAYLPATIVTTSELAERFGVDPGLIERITGIRERRYAGAETALTMATQAA CCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QQALANANYALDSIDLIVVASAGMHQAIPCTAALLQNALQAPVGRSACFDLNATCMSFML HHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHH ALQLLAPLINSGVYQRVLLVSSERASVSLNPHEWESTALFGDAAAAVVLERGDGSSSLQH HHHHHHHHHCCHHHHHHHEEECCCCEEECCCCCCCCCEEECCCEEEEEEECCCCCCCCCH SQFATWSNGSDLIQVRGGGTAQHPNAADTTPDMNWFMMQGPLAFRFVLREMQQFVERFLA HHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH ELGWQNSEIDAVIPHQANRHAIEQVQARLGFQPDQVISNLATRGNCVSVSVPLALAEAVA HHCCCCCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHH AGRIQRGNRLVLLGSGAGITLGAVALIY HHHHCCCCEEEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]