Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yjbR [C]

Identifier: 159896842

GI number: 159896842

Start: 369280

End: 369630

Strand: Reverse

Name: yjbR [C]

Synonym: Haur_0309

Alternate gene names: 159896842

Gene position: 369630-369280 (Counterclockwise)

Preceding gene: 159896843

Following gene: 159896841

Centisome position: 5.82

GC content: 48.72

Gene sequence:

>351_bases
ATGAGCAACCACGTTGATTATGCCCAAGCTCGCAGCTATTGCCTGAGCCTTGACGACGTAATTGAAGATTATCCATTTGG
GATTGAACCCTTGGTGTTTAAAATTGGCGATGAGCGCGGCAAAATGTTTGCCCTACTTGTTCGCAGTGAGCCAGCCCAAA
TTAGCCTGAAATGCGATCCTGATCGGGCTGAGATGTTGCGCGAACAATATCCAGCGATTACGGCTGGCTATCATTTAAAT
AAGCGCCATTGGAACACAATTGTGCTTGATGGCAGCGTGCCCGATGAGGAATGTTTGGCGCTGATCGCCCATTCCTATGA
TTTAGTCCGGCCAAAACGGCGTAAAGCCTAG

Upstream 100 bases:

>100_bases
GCCTGCGAATTGTGCTTGAGTGATGGCGTGACCAAAGCCATGAACGCCGTCAATGGCGAAGCCCCCAAGAAAAGTAAAGA
TCAAGCAAAGGAGCCAGCCA

Downstream 100 bases:

>100_bases
GCTTTTCCCTCACCCCCAACCCCTCTCACTGTGGCGGGCGAGGGGAGCTTGATTTAAGTTCATTTGAGGTTGATTAATGC
TGCCGTTGCAGATTGTACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSNHVDYAQARSYCLSLDDVIEDYPFGIEPLVFKIGDERGKMFALLVRSEPAQISLKCDPDRAEMLREQYPAITAGYHLN
KRHWNTIVLDGSVPDEECLALIAHSYDLVRPKRRKA

Sequences:

>Translated_116_residues
MSNHVDYAQARSYCLSLDDVIEDYPFGIEPLVFKIGDERGKMFALLVRSEPAQISLKCDPDRAEMLREQYPAITAGYHLN
KRHWNTIVLDGSVPDEECLALIAHSYDLVRPKRRKA
>Mature_115_residues
SNHVDYAQARSYCLSLDDVIEDYPFGIEPLVFKIGDERGKMFALLVRSEPAQISLKCDPDRAEMLREQYPAITAGYHLNK
RHWNTIVLDGSVPDEECLALIAHSYDLVRPKRRKA

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367342, Length=80, Percent_Identity=41.25, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13293; Mature: 13162

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNHVDYAQARSYCLSLDDVIEDYPFGIEPLVFKIGDERGKMFALLVRSEPAQISLKCDP
CCCCCCHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEECC
DRAEMLREQYPAITAGYHLNKRHWNTIVLDGSVPDEECLALIAHSYDLVRPKRRKA
CHHHHHHHHCCCEECCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SNHVDYAQARSYCLSLDDVIEDYPFGIEPLVFKIGDERGKMFALLVRSEPAQISLKCDP
CCCCCHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEECC
DRAEMLREQYPAITAGYHLNKRHWNTIVLDGSVPDEECLALIAHSYDLVRPKRRKA
CHHHHHHHHCCCEECCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA