Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yghO [H]

Identifier: 159896841

GI number: 159896841

Start: 368061

End: 369203

Strand: Reverse

Name: yghO [H]

Synonym: Haur_0308

Alternate gene names: 159896841

Gene position: 369203-368061 (Counterclockwise)

Preceding gene: 159896842

Following gene: 159896835

Centisome position: 5.82

GC content: 49.78

Gene sequence:

>1143_bases
ATGCTGCCGTTGCAGATTGTACCAGTGCGTAATGCCCGCCAGCGGCAACAATTTATTCATTTTCCGTGGAAGGTTTATCG
TGGCGCAAACCCCGATCCGTTGTGGGTTCCGCCCTTGTTAATCGAACGCGAACGCTTTTTTAACCCCAAACATGGCGGTT
TTTTTGCCCATGGCGATGTGCAATTGTTTCTGGCGCAGCGCGGCACGGAAATTGTTGGCACAATCTCGGCCCACATCAAT
TTTCTGCATAATCGCACTCACAACGAGCACATTGGTTTTTTTGGTTTTTTCGAGGTGCTCGATGACCCCGAAGCTGCCGC
TACACTGCTGCAAACTGCCTGTGCTTGGGTGCGTGATCGCGGCTATAAAGCGATTCGTGGCCCTATGAACTTCTCGATTA
ATGATGAATGTGGCTTGCTGATCGAAGGCTTTGAGCTAGCCCCTGTGATGATGATGACCTATAATCCAGCCCGTTATGTT
GAATATATCGAGCATCAAGGTTTTGGCAAGGCGATCGATTTATATGCCTGGATCGTCGATCAGCGCAGCTATGCCGAAAA
AGGGCGTGGGGCGAAAATCGAGCGGGTGGCAGCCTTAGCCCAAGCCCAAACTGGCTTAACTTTTCGCAAACTGAATATGC
GACGTTTTGCCGAAGAAGTTGAGGCGGGCTGGCACGTTTATAATCAGGCTTGGGCCAACAATTGGGGCGCAATTCATATG
ACCTTGGCTGAATTTCGCCATTTAGCCTATAGCTTCAAGCCTTTTCTCGACCCCGAAGTGATGATTGTGGCCGAAGATCA
GGGGCGCATGGTAGGCTTACTGATCGCTGTGCCCGATATTAATATTCCGTTGCGCTACAGTGATGGACGCTTATTGCCAT
TTGGCTGGCTCACGATGTTGCGGCGCAAACGCGAAATCGACCAAATGCGGGTGTTGATTATGGGGGTTTTGCCCGAATAT
CGACGACGCGGGATCGATGCAGTTTTTTATCGTGAAGTGCGCAATGCAGGCCTCAAGCGCGGCTATCATACCGCCGAAAT
GTCGTGGATTCTTGAAAATAACGATGTGATGAACAATACGATTGCTGGTTTAGGCGGGCGGCGCTATAAAACCTATCGCA
TTTACGAAAAAAAGCTTAGTTAA

Upstream 100 bases:

>100_bases
CGGCCAAAACGGCGTAAAGCCTAGGCTTTTCCCTCACCCCCAACCCCTCTCACTGTGGCGGGCGAGGGGAGCTTGATTTA
AGTTCATTTGAGGTTGATTA

Downstream 100 bases:

>100_bases
ATTGATCGGGAGCAACCAACAGGTTGCTCCCGTATTGCAAGGCAAGGGCTACGAGCATAGCCACTGCTCTTAACGCCTCA
GATAGTCAAATTACTACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MLPLQIVPVRNARQRQQFIHFPWKVYRGANPDPLWVPPLLIERERFFNPKHGGFFAHGDVQLFLAQRGTEIVGTISAHIN
FLHNRTHNEHIGFFGFFEVLDDPEAAATLLQTACAWVRDRGYKAIRGPMNFSINDECGLLIEGFELAPVMMMTYNPARYV
EYIEHQGFGKAIDLYAWIVDQRSYAEKGRGAKIERVAALAQAQTGLTFRKLNMRRFAEEVEAGWHVYNQAWANNWGAIHM
TLAEFRHLAYSFKPFLDPEVMIVAEDQGRMVGLLIAVPDINIPLRYSDGRLLPFGWLTMLRRKREIDQMRVLIMGVLPEY
RRRGIDAVFYREVRNAGLKRGYHTAEMSWILENNDVMNNTIAGLGGRRYKTYRIYEKKLS

Sequences:

>Translated_380_residues
MLPLQIVPVRNARQRQQFIHFPWKVYRGANPDPLWVPPLLIERERFFNPKHGGFFAHGDVQLFLAQRGTEIVGTISAHIN
FLHNRTHNEHIGFFGFFEVLDDPEAAATLLQTACAWVRDRGYKAIRGPMNFSINDECGLLIEGFELAPVMMMTYNPARYV
EYIEHQGFGKAIDLYAWIVDQRSYAEKGRGAKIERVAALAQAQTGLTFRKLNMRRFAEEVEAGWHVYNQAWANNWGAIHM
TLAEFRHLAYSFKPFLDPEVMIVAEDQGRMVGLLIAVPDINIPLRYSDGRLLPFGWLTMLRRKREIDQMRVLIMGVLPEY
RRRGIDAVFYREVRNAGLKRGYHTAEMSWILENNDVMNNTIAGLGGRRYKTYRIYEKKLS
>Mature_380_residues
MLPLQIVPVRNARQRQQFIHFPWKVYRGANPDPLWVPPLLIERERFFNPKHGGFFAHGDVQLFLAQRGTEIVGTISAHIN
FLHNRTHNEHIGFFGFFEVLDDPEAAATLLQTACAWVRDRGYKAIRGPMNFSINDECGLLIEGFELAPVMMMTYNPARYV
EYIEHQGFGKAIDLYAWIVDQRSYAEKGRGAKIERVAALAQAQTGLTFRKLNMRRFAEEVEAGWHVYNQAWANNWGAIHM
TLAEFRHLAYSFKPFLDPEVMIVAEDQGRMVGLLIAVPDINIPLRYSDGRLLPFGWLTMLRRKREIDQMRVLIMGVLPEY
RRRGIDAVFYREVRNAGLKRGYHTAEMSWILENNDVMNNTIAGLGGRRYKTYRIYEKKLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44038; Mature: 44038

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLQIVPVRNARQRQQFIHFPWKVYRGANPDPLWVPPLLIERERFFNPKHGGFFAHGDV
CCCEEEEECCCHHHHHHHHCCCHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCE
QLFLAQRGTEIVGTISAHINFLHNRTHNEHIGFFGFFEVLDDPEAAATLLQTACAWVRDR
EEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHC
GYKAIRGPMNFSINDECGLLIEGFELAPVMMMTYNPARYVEYIEHQGFGKAIDLYAWIVD
CCEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEEEEC
QRSYAEKGRGAKIERVAALAQAQTGLTFRKLNMRRFAEEVEAGWHVYNQAWANNWGAIHM
CHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
TLAEFRHLAYSFKPFLDPEVMIVAEDQGRMVGLLIAVPDINIPLRYSDGRLLPFGWLTML
EHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHH
RRKREIDQMRVLIMGVLPEYRRRGIDAVFYREVRNAGLKRGYHTAEMSWILENNDVMNNT
HHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHH
IAGLGGRRYKTYRIYEKKLS
HHCCCCCEEEEEEEEEHHCC
>Mature Secondary Structure
MLPLQIVPVRNARQRQQFIHFPWKVYRGANPDPLWVPPLLIERERFFNPKHGGFFAHGDV
CCCEEEEECCCHHHHHHHHCCCHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCE
QLFLAQRGTEIVGTISAHINFLHNRTHNEHIGFFGFFEVLDDPEAAATLLQTACAWVRDR
EEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHC
GYKAIRGPMNFSINDECGLLIEGFELAPVMMMTYNPARYVEYIEHQGFGKAIDLYAWIVD
CCEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEEEEC
QRSYAEKGRGAKIERVAALAQAQTGLTFRKLNMRRFAEEVEAGWHVYNQAWANNWGAIHM
CHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
TLAEFRHLAYSFKPFLDPEVMIVAEDQGRMVGLLIAVPDINIPLRYSDGRLLPFGWLTML
EHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHH
RRKREIDQMRVLIMGVLPEYRRRGIDAVFYREVRNAGLKRGYHTAEMSWILENNDVMNNT
HHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHH
IAGLGGRRYKTYRIYEKKLS
HHCCCCCEEEEEEEEEHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]