| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yghO [H]
Identifier: 159896841
GI number: 159896841
Start: 368061
End: 369203
Strand: Reverse
Name: yghO [H]
Synonym: Haur_0308
Alternate gene names: 159896841
Gene position: 369203-368061 (Counterclockwise)
Preceding gene: 159896842
Following gene: 159896835
Centisome position: 5.82
GC content: 49.78
Gene sequence:
>1143_bases ATGCTGCCGTTGCAGATTGTACCAGTGCGTAATGCCCGCCAGCGGCAACAATTTATTCATTTTCCGTGGAAGGTTTATCG TGGCGCAAACCCCGATCCGTTGTGGGTTCCGCCCTTGTTAATCGAACGCGAACGCTTTTTTAACCCCAAACATGGCGGTT TTTTTGCCCATGGCGATGTGCAATTGTTTCTGGCGCAGCGCGGCACGGAAATTGTTGGCACAATCTCGGCCCACATCAAT TTTCTGCATAATCGCACTCACAACGAGCACATTGGTTTTTTTGGTTTTTTCGAGGTGCTCGATGACCCCGAAGCTGCCGC TACACTGCTGCAAACTGCCTGTGCTTGGGTGCGTGATCGCGGCTATAAAGCGATTCGTGGCCCTATGAACTTCTCGATTA ATGATGAATGTGGCTTGCTGATCGAAGGCTTTGAGCTAGCCCCTGTGATGATGATGACCTATAATCCAGCCCGTTATGTT GAATATATCGAGCATCAAGGTTTTGGCAAGGCGATCGATTTATATGCCTGGATCGTCGATCAGCGCAGCTATGCCGAAAA AGGGCGTGGGGCGAAAATCGAGCGGGTGGCAGCCTTAGCCCAAGCCCAAACTGGCTTAACTTTTCGCAAACTGAATATGC GACGTTTTGCCGAAGAAGTTGAGGCGGGCTGGCACGTTTATAATCAGGCTTGGGCCAACAATTGGGGCGCAATTCATATG ACCTTGGCTGAATTTCGCCATTTAGCCTATAGCTTCAAGCCTTTTCTCGACCCCGAAGTGATGATTGTGGCCGAAGATCA GGGGCGCATGGTAGGCTTACTGATCGCTGTGCCCGATATTAATATTCCGTTGCGCTACAGTGATGGACGCTTATTGCCAT TTGGCTGGCTCACGATGTTGCGGCGCAAACGCGAAATCGACCAAATGCGGGTGTTGATTATGGGGGTTTTGCCCGAATAT CGACGACGCGGGATCGATGCAGTTTTTTATCGTGAAGTGCGCAATGCAGGCCTCAAGCGCGGCTATCATACCGCCGAAAT GTCGTGGATTCTTGAAAATAACGATGTGATGAACAATACGATTGCTGGTTTAGGCGGGCGGCGCTATAAAACCTATCGCA TTTACGAAAAAAAGCTTAGTTAA
Upstream 100 bases:
>100_bases CGGCCAAAACGGCGTAAAGCCTAGGCTTTTCCCTCACCCCCAACCCCTCTCACTGTGGCGGGCGAGGGGAGCTTGATTTA AGTTCATTTGAGGTTGATTA
Downstream 100 bases:
>100_bases ATTGATCGGGAGCAACCAACAGGTTGCTCCCGTATTGCAAGGCAAGGGCTACGAGCATAGCCACTGCTCTTAACGCCTCA GATAGTCAAATTACTACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MLPLQIVPVRNARQRQQFIHFPWKVYRGANPDPLWVPPLLIERERFFNPKHGGFFAHGDVQLFLAQRGTEIVGTISAHIN FLHNRTHNEHIGFFGFFEVLDDPEAAATLLQTACAWVRDRGYKAIRGPMNFSINDECGLLIEGFELAPVMMMTYNPARYV EYIEHQGFGKAIDLYAWIVDQRSYAEKGRGAKIERVAALAQAQTGLTFRKLNMRRFAEEVEAGWHVYNQAWANNWGAIHM TLAEFRHLAYSFKPFLDPEVMIVAEDQGRMVGLLIAVPDINIPLRYSDGRLLPFGWLTMLRRKREIDQMRVLIMGVLPEY RRRGIDAVFYREVRNAGLKRGYHTAEMSWILENNDVMNNTIAGLGGRRYKTYRIYEKKLS
Sequences:
>Translated_380_residues MLPLQIVPVRNARQRQQFIHFPWKVYRGANPDPLWVPPLLIERERFFNPKHGGFFAHGDVQLFLAQRGTEIVGTISAHIN FLHNRTHNEHIGFFGFFEVLDDPEAAATLLQTACAWVRDRGYKAIRGPMNFSINDECGLLIEGFELAPVMMMTYNPARYV EYIEHQGFGKAIDLYAWIVDQRSYAEKGRGAKIERVAALAQAQTGLTFRKLNMRRFAEEVEAGWHVYNQAWANNWGAIHM TLAEFRHLAYSFKPFLDPEVMIVAEDQGRMVGLLIAVPDINIPLRYSDGRLLPFGWLTMLRRKREIDQMRVLIMGVLPEY RRRGIDAVFYREVRNAGLKRGYHTAEMSWILENNDVMNNTIAGLGGRRYKTYRIYEKKLS >Mature_380_residues MLPLQIVPVRNARQRQQFIHFPWKVYRGANPDPLWVPPLLIERERFFNPKHGGFFAHGDVQLFLAQRGTEIVGTISAHIN FLHNRTHNEHIGFFGFFEVLDDPEAAATLLQTACAWVRDRGYKAIRGPMNFSINDECGLLIEGFELAPVMMMTYNPARYV EYIEHQGFGKAIDLYAWIVDQRSYAEKGRGAKIERVAALAQAQTGLTFRKLNMRRFAEEVEAGWHVYNQAWANNWGAIHM TLAEFRHLAYSFKPFLDPEVMIVAEDQGRMVGLLIAVPDINIPLRYSDGRLLPFGWLTMLRRKREIDQMRVLIMGVLPEY RRRGIDAVFYREVRNAGLKRGYHTAEMSWILENNDVMNNTIAGLGGRRYKTYRIYEKKLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44038; Mature: 44038
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLQIVPVRNARQRQQFIHFPWKVYRGANPDPLWVPPLLIERERFFNPKHGGFFAHGDV CCCEEEEECCCHHHHHHHHCCCHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCE QLFLAQRGTEIVGTISAHINFLHNRTHNEHIGFFGFFEVLDDPEAAATLLQTACAWVRDR EEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHC GYKAIRGPMNFSINDECGLLIEGFELAPVMMMTYNPARYVEYIEHQGFGKAIDLYAWIVD CCEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEEEEC QRSYAEKGRGAKIERVAALAQAQTGLTFRKLNMRRFAEEVEAGWHVYNQAWANNWGAIHM CHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE TLAEFRHLAYSFKPFLDPEVMIVAEDQGRMVGLLIAVPDINIPLRYSDGRLLPFGWLTML EHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHH RRKREIDQMRVLIMGVLPEYRRRGIDAVFYREVRNAGLKRGYHTAEMSWILENNDVMNNT HHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHH IAGLGGRRYKTYRIYEKKLS HHCCCCCEEEEEEEEEHHCC >Mature Secondary Structure MLPLQIVPVRNARQRQQFIHFPWKVYRGANPDPLWVPPLLIERERFFNPKHGGFFAHGDV CCCEEEEECCCHHHHHHHHCCCHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCE QLFLAQRGTEIVGTISAHINFLHNRTHNEHIGFFGFFEVLDDPEAAATLLQTACAWVRDR EEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHC GYKAIRGPMNFSINDECGLLIEGFELAPVMMMTYNPARYVEYIEHQGFGKAIDLYAWIVD CCEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEEEEC QRSYAEKGRGAKIERVAALAQAQTGLTFRKLNMRRFAEEVEAGWHVYNQAWANNWGAIHM CHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE TLAEFRHLAYSFKPFLDPEVMIVAEDQGRMVGLLIAVPDINIPLRYSDGRLLPFGWLTML EHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHH RRKREIDQMRVLIMGVLPEYRRRGIDAVFYREVRNAGLKRGYHTAEMSWILENNDVMNNT HHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHH IAGLGGRRYKTYRIYEKKLS HHCCCCCEEEEEEEEEHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]