| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896840
Identifier: 159896840
GI number: 159896840
Start: 367056
End: 367967
Strand: Direct
Name: 159896840
Synonym: Haur_0307
Alternate gene names: NA
Gene position: 367056-367967 (Clockwise)
Preceding gene: 159896839
Following gene: 159896844
Centisome position: 5.78
GC content: 50.33
Gene sequence:
>912_bases ATGGCTACTGAGAAAAATGTGCATCAAACTGAGCGCTTGCTTTCGGTAGCAAGCGGCAGTGCGTTGGTTGCATTTGGAAT TATGCGTCGCCATTTGCCAGTAAGCTTGGCGGCGATTGCTGGTGGTGCGCCGCTCTTGTGGCGCGGCTTGACTGGCCATT GCCCAGTCTATAGTGCGCTCAATATCAATACAGCTGAACCAACGACCCAAGCCATGTGGAGCAAGCCTACTGCCCCAGCA ACGCCACGGATTCCAATTCCTACCAACCATACCAATGCCGATCAGGCTGGCGTAGACCAAGCCAAGGCGATCAGCGTTGA ACAGACAATTACGGTTGATCAGCCAGTCGCCGAGGTGTTTCGCTTTTGGGGCAATTTTGAAAACTTGCCTAAATTTATGC ATTACCTCAATAGCGTCAAGATGTTTCAAAATGGCACGAGCCACTGGGAAGCCAAGGCTCCGCTGGGCTTGAGCATTTCG TGGGATGCAGAAATTGCTGATGCCAAACTGAATGAATATATCGCTTGGCGTTCATTGCCCAACTCAACGTTGCCCAATCA AGGTCGAGTTGAATTTAATGCCTTGAGCGATGAACAAACTGAAGTGCGCGTGCAGCTCGATTATCAACCACCAGCAGGCA CGGTTGGTGAGGCTGTCGCCAAATTGTTTGGCAACGATCCCCAAAAGGCGATTGCCGAAGATCTTGAACGGTTCCGCAAG GTAATTGAGGATGAAGAAGAACGCACGGCGGTCAAGGCCAATGCGGTTGGCGAAAAGCCCAATGCTAACAATCCTGAATA TAGCGATAAGCTCAAGGTTGAGGCCAAAACTAACAAAGAAGAATCGCTTGAGAATGAAGATAAAGCGGTCGATACCAGTT TTCCTGCCAGTGATCCGCCAGCAACCTGGTAG
Upstream 100 bases:
>100_bases TCTTCGTGTCCTTCGTGCCCTTCGTGGATCAAATCTTGTGGTACGCAACTTGCGATAGTGCTCAGTAGATTGCAATAGCC TGCTAGTGAAGGAGTTTTGT
Downstream 100 bases:
>100_bases TAATTTGACTATCTGAGGCGTTAAGAGCAGTGGCTATGCTCGTAGCCCTTGCCTTGCAATACGGGAGCAACCTGTTGGTT GCTCCCGATCAATTTAACTA
Product: cyclase/dehydrase
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MATEKNVHQTERLLSVASGSALVAFGIMRRHLPVSLAAIAGGAPLLWRGLTGHCPVYSALNINTAEPTTQAMWSKPTAPA TPRIPIPTNHTNADQAGVDQAKAISVEQTITVDQPVAEVFRFWGNFENLPKFMHYLNSVKMFQNGTSHWEAKAPLGLSIS WDAEIADAKLNEYIAWRSLPNSTLPNQGRVEFNALSDEQTEVRVQLDYQPPAGTVGEAVAKLFGNDPQKAIAEDLERFRK VIEDEEERTAVKANAVGEKPNANNPEYSDKLKVEAKTNKEESLENEDKAVDTSFPASDPPATW
Sequences:
>Translated_303_residues MATEKNVHQTERLLSVASGSALVAFGIMRRHLPVSLAAIAGGAPLLWRGLTGHCPVYSALNINTAEPTTQAMWSKPTAPA TPRIPIPTNHTNADQAGVDQAKAISVEQTITVDQPVAEVFRFWGNFENLPKFMHYLNSVKMFQNGTSHWEAKAPLGLSIS WDAEIADAKLNEYIAWRSLPNSTLPNQGRVEFNALSDEQTEVRVQLDYQPPAGTVGEAVAKLFGNDPQKAIAEDLERFRK VIEDEEERTAVKANAVGEKPNANNPEYSDKLKVEAKTNKEESLENEDKAVDTSFPASDPPATW >Mature_302_residues ATEKNVHQTERLLSVASGSALVAFGIMRRHLPVSLAAIAGGAPLLWRGLTGHCPVYSALNINTAEPTTQAMWSKPTAPAT PRIPIPTNHTNADQAGVDQAKAISVEQTITVDQPVAEVFRFWGNFENLPKFMHYLNSVKMFQNGTSHWEAKAPLGLSISW DAEIADAKLNEYIAWRSLPNSTLPNQGRVEFNALSDEQTEVRVQLDYQPPAGTVGEAVAKLFGNDPQKAIAEDLERFRKV IEDEEERTAVKANAVGEKPNANNPEYSDKLKVEAKTNKEESLENEDKAVDTSFPASDPPATW
Specific function: Unknown
COG id: COG5637
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 33244; Mature: 33113
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATEKNVHQTERLLSVASGSALVAFGIMRRHLPVSLAAIAGGAPLLWRGLTGHCPVYSAL CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEHHCCCCCCEECCCCCCCCCEEEE NINTAEPTTQAMWSKPTAPATPRIPIPTNHTNADQAGVDQAKAISVEQTITVDQPVAEVF ECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHHEECHHHEEECCHHHHHHH RFWGNFENLPKFMHYLNSVKMFQNGTSHWEAKAPLGLSISWDAEIADAKLNEYIAWRSLP HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCC NSTLPNQGRVEFNALSDEQTEVRVQLDYQPPAGTVGEAVAKLFGNDPQKAIAEDLERFRK CCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH VIEDEEERTAVKANAVGEKPNANNPEYSDKLKVEAKTNKEESLENEDKAVDTSFPASDPP HHCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCHHCCCCCCCCCCCCC ATW CCC >Mature Secondary Structure ATEKNVHQTERLLSVASGSALVAFGIMRRHLPVSLAAIAGGAPLLWRGLTGHCPVYSAL CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEHHCCCCCCEECCCCCCCCCEEEE NINTAEPTTQAMWSKPTAPATPRIPIPTNHTNADQAGVDQAKAISVEQTITVDQPVAEVF ECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHHEECHHHEEECCHHHHHHH RFWGNFENLPKFMHYLNSVKMFQNGTSHWEAKAPLGLSISWDAEIADAKLNEYIAWRSLP HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCC NSTLPNQGRVEFNALSDEQTEVRVQLDYQPPAGTVGEAVAKLFGNDPQKAIAEDLERFRK CCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH VIEDEEERTAVKANAVGEKPNANNPEYSDKLKVEAKTNKEESLENEDKAVDTSFPASDPP HHCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCHHCCCCCCCCCCCCC ATW CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA