| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896844
Identifier: 159896844
GI number: 159896844
Start: 370328
End: 370864
Strand: Direct
Name: 159896844
Synonym: Haur_0311
Alternate gene names: NA
Gene position: 370328-370864 (Clockwise)
Preceding gene: 159896840
Following gene: 159896845
Centisome position: 5.84
GC content: 53.82
Gene sequence:
>537_bases ATGCGCATTCTACGATTTCTGTTTGTGGCACTAGCGCTGCTGGTGCTCCTGCCCAACCGCGCTTTCGCGGATAATCCAAA CGAGCAAGTGTTGATCGACGAAGTTCGCGGAGCGTATCGGGTTGTCGCCACCCTTGCCCCAAATCCACCAGCAGTTGGTG AGGCGCTGTTGCGGGTTGTGATTACCGATGCGACCTCGGGCCAACCTTCGCCGCTTAATTTGGTGCAGCTCTATGCCGCG CCCGATAGCATTGGCCGCGAAGAATTATTTACCATGCTGCCGGAAAATCAAGATCGTAACGCAGGCCGCTATACCAGCGA CCGACTGCGCTTTACGATTAGCGATCAATGGACAATGCGCTTAGTGCTGGGCGCTCCTGAAGGCGAGATGGTTTTTACCA CCAAAGTCCAAGTCGATTCAGTGTTTAAGGAGATCGGCGAAGCAGCAGTGATTGCCGTGCCTGCAACCTTGGTCGGTTTG GCGGTGGTCTTTATCGGCTATAAAATTTGGCGCAAAAAACGCCAAGCAGCCAACTAA
Upstream 100 bases:
>100_bases AAAACATGACATCCCCACGACAGGTTTGGTTAAAATCGCGATATACTACAGGCAATGCGCCGCCAATGGCGCAGGCTGAA GCATTGTACCATAGGGAAGT
Downstream 100 bases:
>100_bases ATCAAGGCCAATTTTTGGTGGCGCTAGGCTACTCAATACCAATTAAGTACGTCTTAGCGTCGCCACATTGAGTTAATTCC ATGCAACTAACACCAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MRILRFLFVALALLVLLPNRAFADNPNEQVLIDEVRGAYRVVATLAPNPPAVGEALLRVVITDATSGQPSPLNLVQLYAA PDSIGREELFTMLPENQDRNAGRYTSDRLRFTISDQWTMRLVLGAPEGEMVFTTKVQVDSVFKEIGEAAVIAVPATLVGL AVVFIGYKIWRKKRQAAN
Sequences:
>Translated_178_residues MRILRFLFVALALLVLLPNRAFADNPNEQVLIDEVRGAYRVVATLAPNPPAVGEALLRVVITDATSGQPSPLNLVQLYAA PDSIGREELFTMLPENQDRNAGRYTSDRLRFTISDQWTMRLVLGAPEGEMVFTTKVQVDSVFKEIGEAAVIAVPATLVGL AVVFIGYKIWRKKRQAAN >Mature_178_residues MRILRFLFVALALLVLLPNRAFADNPNEQVLIDEVRGAYRVVATLAPNPPAVGEALLRVVITDATSGQPSPLNLVQLYAA PDSIGREELFTMLPENQDRNAGRYTSDRLRFTISDQWTMRLVLGAPEGEMVFTTKVQVDSVFKEIGEAAVIAVPATLVGL AVVFIGYKIWRKKRQAAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19637; Mature: 19637
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILRFLFVALALLVLLPNRAFADNPNEQVLIDEVRGAYRVVATLAPNPPAVGEALLRVV CHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCEEEEEEECCCCCHHHHHHHHHH ITDATSGQPSPLNLVQLYAAPDSIGREELFTMLPENQDRNAGRYTSDRLRFTISDQWTMR EECCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEE LVLGAPEGEMVFTTKVQVDSVFKEIGEAAVIAVPATLVGLAVVFIGYKIWRKKRQAAN EEEECCCCCEEEEEEHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRILRFLFVALALLVLLPNRAFADNPNEQVLIDEVRGAYRVVATLAPNPPAVGEALLRVV CHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCEEEEEEECCCCCHHHHHHHHHH ITDATSGQPSPLNLVQLYAAPDSIGREELFTMLPENQDRNAGRYTSDRLRFTISDQWTMR EECCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEE LVLGAPEGEMVFTTKVQVDSVFKEIGEAAVIAVPATLVGLAVVFIGYKIWRKKRQAAN EEEECCCCCEEEEEEHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA