| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is mviN [H]
Identifier: 159896824
GI number: 159896824
Start: 342799
End: 344640
Strand: Direct
Name: mviN [H]
Synonym: Haur_0291
Alternate gene names: 159896824
Gene position: 342799-344640 (Clockwise)
Preceding gene: 159896822
Following gene: 159896825
Centisome position: 5.4
GC content: 52.12
Gene sequence:
>1842_bases ATGAGCAACGAGTCCTTATCGACGACTCCCGCGCCAGCCCCAAGCCCGTTACGTAAACGCTCGATGAGTGCCCTGTTGAA TAGCGCAATTGTGATGTTGGGCTATTTATTGAGCCGTGTGATTGGCATTGTGCGTCAAACGGTCTTATCAAGCTATTTTG GCACAAATATCGTTAGCGATATCTATACCACAGCCTTTCAAATTCCCGATTTGTTGTACTTGGTGATTATTGGTGGAGCC TTGGGCACGGCCTTTATTCCAATTTTTATCGAAGCCTATACGAAGGAAACCCATGAACGCGCTTGGCAAGTGGCAAATTT GGTGATCAACGCCGCATTGACTGTGCTGAGTGTGGTATCGTTGGCAATTTTGTTGCTGGCCGACCCGCTGCTGCGTTGGC TCAACCCAACCTATACGCCTGAACAACTGGGCTTGGCGATTTACTTGGTGCGCTTGTTTATGCTCTCGCCGTTGTTGCTT GGTTTGGGTGGTTTGGCAATGGCGACGCTGAATGCGCTTGACCATTTCACCCTGCCAGCCTTGGTTCCGGTGATTTATAA CGTGGCGATTATTGCCGGAATTGTGCTGATCGGGCCGTTGCTGGTGCGCTTTGGTTGGGTGCAGCACTCGATCAGTGTGG TTGAGCATAATGGTCAACCAGTTTCAATCGAAGGAGCCGCCTGGGGCGTGGTGTTGGGGGCGTTGCTTTATTTAGTTTGT CAATTGCCAGTGCTCTATCGCTCAGGTTTTCGCTATCGTGTGCTGTTCAACTGGCGCGATGCCGCCTTGCGCCGGATTGG CCTGCTGATGGGGCCACGAGTGTTTGGACAAGCAGCGATGCAAATCAACACAATTGCGATTTTTAGTTTTGCCAAATTAT TTGGTGATGGCCGCGCCACAGCGTTGAGCAATGCCCTGACGTTAATGTTGCTGCCGCATGGAATTTTTGCCCTCAGCTTG GCCACCGTGATGTTTCCGCAACTTAGCCGTTTAGATGCTGCTGGCGATCACGAGGGCTTTAATCAAACCACCCGCAACAC TTTGGGCACAGTCTTATGGGCAATTATTCCTGCTGCTGCTGGCTTGATCATGCTGGCCACGCCGATTGTGCAGGTGCTAT TTCAACGCGGCAACTTCGATAGCCAATCGACCTTGTGGGTGGTGCAGGCCTTGATGATGTATGCCACCGCCTTGCCAGCC TTTGGCGCTGCCGAAATTCTGATTCGTGGCTTTTATGCCCGTCAAGAAACCACGATCCCAGTGGTGATTGGGGTGGTGAC CGTAGCGTTGAATATTGGTCTGTGTTGGCTATTGACCCAATTTAGCACCAGCCATATTGGTTTGGCAGGTGCATTTAGCA TCACCAACAACCTCGAATTACTGCTGTTGCTGGTGATGTGGCGGCGACGCAATGGCAATCTTGATGCGACTGGTCAACTC CGCCGCTCCTTGCTGATTACGCTGGTGAGTTCGTTGGCAATGGTGTTGGTGTTGCAAGCGCCAGTCTTGGCCTTGCTGCT TGTTGGCCTGCTGATGCTGAATTATGCTTGGCGGCGTTGGGGGCGGCAGCGCTGGCCGCAGGCTGGTCAAGCGCCGATTT GGTTGGGTTTAGCACTGGCTACGTTGGCAGGCTTGGGCTTAGGCTGGCAATTGCAATTATTCGATTTGGCGACATGGCTG CAAATTGCGCCGCAAGCTCAGAGTTTATGGCGTTTGCTTGGCTCGTTGGTTTTCAATGGCTTACTGGCAATTGCCGTTTA TTTTGGGTGTTCAAGTGTTTTGGGTGCGTCGGAAGCCGCAGTTTGGCAACGACGGATTTTGGGCCGTTTGAAACGCCGCT AA
Upstream 100 bases:
>100_bases TGACCTCCTCGAAGGTTTGGTATCATAAGAAAACGCCGAGGCCACGCAGCCTGCGGCTAATTTGGTTTCGCGACGATGGA TTATACCAGAAAGAATCAAA
Downstream 100 bases:
>100_bases ATCTACTGTGACCTAATTCACACTCCCATTGCTCAATCGGTGACAGAAATTGACACATTCGCCAATTATAGTGCCTACAT CAACAGATAAATATGTATGG
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 613; Mature: 612
Protein sequence:
>613_residues MSNESLSTTPAPAPSPLRKRSMSALLNSAIVMLGYLLSRVIGIVRQTVLSSYFGTNIVSDIYTTAFQIPDLLYLVIIGGA LGTAFIPIFIEAYTKETHERAWQVANLVINAALTVLSVVSLAILLLADPLLRWLNPTYTPEQLGLAIYLVRLFMLSPLLL GLGGLAMATLNALDHFTLPALVPVIYNVAIIAGIVLIGPLLVRFGWVQHSISVVEHNGQPVSIEGAAWGVVLGALLYLVC QLPVLYRSGFRYRVLFNWRDAALRRIGLLMGPRVFGQAAMQINTIAIFSFAKLFGDGRATALSNALTLMLLPHGIFALSL ATVMFPQLSRLDAAGDHEGFNQTTRNTLGTVLWAIIPAAAGLIMLATPIVQVLFQRGNFDSQSTLWVVQALMMYATALPA FGAAEILIRGFYARQETTIPVVIGVVTVALNIGLCWLLTQFSTSHIGLAGAFSITNNLELLLLLVMWRRRNGNLDATGQL RRSLLITLVSSLAMVLVLQAPVLALLLVGLLMLNYAWRRWGRQRWPQAGQAPIWLGLALATLAGLGLGWQLQLFDLATWL QIAPQAQSLWRLLGSLVFNGLLAIAVYFGCSSVLGASEAAVWQRRILGRLKRR
Sequences:
>Translated_613_residues MSNESLSTTPAPAPSPLRKRSMSALLNSAIVMLGYLLSRVIGIVRQTVLSSYFGTNIVSDIYTTAFQIPDLLYLVIIGGA LGTAFIPIFIEAYTKETHERAWQVANLVINAALTVLSVVSLAILLLADPLLRWLNPTYTPEQLGLAIYLVRLFMLSPLLL GLGGLAMATLNALDHFTLPALVPVIYNVAIIAGIVLIGPLLVRFGWVQHSISVVEHNGQPVSIEGAAWGVVLGALLYLVC QLPVLYRSGFRYRVLFNWRDAALRRIGLLMGPRVFGQAAMQINTIAIFSFAKLFGDGRATALSNALTLMLLPHGIFALSL ATVMFPQLSRLDAAGDHEGFNQTTRNTLGTVLWAIIPAAAGLIMLATPIVQVLFQRGNFDSQSTLWVVQALMMYATALPA FGAAEILIRGFYARQETTIPVVIGVVTVALNIGLCWLLTQFSTSHIGLAGAFSITNNLELLLLLVMWRRRNGNLDATGQL RRSLLITLVSSLAMVLVLQAPVLALLLVGLLMLNYAWRRWGRQRWPQAGQAPIWLGLALATLAGLGLGWQLQLFDLATWL QIAPQAQSLWRLLGSLVFNGLLAIAVYFGCSSVLGASEAAVWQRRILGRLKRR >Mature_612_residues SNESLSTTPAPAPSPLRKRSMSALLNSAIVMLGYLLSRVIGIVRQTVLSSYFGTNIVSDIYTTAFQIPDLLYLVIIGGAL GTAFIPIFIEAYTKETHERAWQVANLVINAALTVLSVVSLAILLLADPLLRWLNPTYTPEQLGLAIYLVRLFMLSPLLLG LGGLAMATLNALDHFTLPALVPVIYNVAIIAGIVLIGPLLVRFGWVQHSISVVEHNGQPVSIEGAAWGVVLGALLYLVCQ LPVLYRSGFRYRVLFNWRDAALRRIGLLMGPRVFGQAAMQINTIAIFSFAKLFGDGRATALSNALTLMLLPHGIFALSLA TVMFPQLSRLDAAGDHEGFNQTTRNTLGTVLWAIIPAAAGLIMLATPIVQVLFQRGNFDSQSTLWVVQALMMYATALPAF GAAEILIRGFYARQETTIPVVIGVVTVALNIGLCWLLTQFSTSHIGLAGAFSITNNLELLLLLVMWRRRNGNLDATGQLR RSLLITLVSSLAMVLVLQAPVLALLLVGLLMLNYAWRRWGRQRWPQAGQAPIWLGLALATLAGLGLGWQLQLFDLATWLQ IAPQAQSLWRLLGSLVFNGLLAIAVYFGCSSVLGASEAAVWQRRILGRLKRR
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=399, Percent_Identity=30.0751879699248, Blast_Score=167, Evalue=2e-42,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 66778; Mature: 66647
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNESLSTTPAPAPSPLRKRSMSALLNSAIVMLGYLLSRVIGIVRQTVLSSYFGTNIVSD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYTTAFQIPDLLYLVIIGGALGTAFIPIFIEAYTKETHERAWQVANLVINAALTVLSVVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAILLLADPLLRWLNPTYTPEQLGLAIYLVRLFMLSPLLLGLGGLAMATLNALDHFTLPA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVPVIYNVAIIAGIVLIGPLLVRFGWVQHSISVVEHNGQPVSIEGAAWGVVLGALLYLVC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHH QLPVLYRSGFRYRVLFNWRDAALRRIGLLMGPRVFGQAAMQINTIAIFSFAKLFGDGRAT HHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH ALSNALTLMLLPHGIFALSLATVMFPQLSRLDAAGDHEGFNQTTRNTLGTVLWAIIPAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH GLIMLATPIVQVLFQRGNFDSQSTLWVVQALMMYATALPAFGAAEILIRGFYARQETTIP HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHH VVIGVVTVALNIGLCWLLTQFSTSHIGLAGAFSITNNLELLLLLVMWRRRNGNLDATGQL HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCHHHHHHHHHHHHCCCCCCHHHHH RRSLLITLVSSLAMVLVLQAPVLALLLVGLLMLNYAWRRWGRQRWPQAGQAPIWLGLALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH TLAGLGLGWQLQLFDLATWLQIAPQAQSLWRLLGSLVFNGLLAIAVYFGCSSVLGASEAA HHHHCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VWQRRILGRLKRR HHHHHHHHHHCCC >Mature Secondary Structure SNESLSTTPAPAPSPLRKRSMSALLNSAIVMLGYLLSRVIGIVRQTVLSSYFGTNIVSD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYTTAFQIPDLLYLVIIGGALGTAFIPIFIEAYTKETHERAWQVANLVINAALTVLSVVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAILLLADPLLRWLNPTYTPEQLGLAIYLVRLFMLSPLLLGLGGLAMATLNALDHFTLPA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVPVIYNVAIIAGIVLIGPLLVRFGWVQHSISVVEHNGQPVSIEGAAWGVVLGALLYLVC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHH QLPVLYRSGFRYRVLFNWRDAALRRIGLLMGPRVFGQAAMQINTIAIFSFAKLFGDGRAT HHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH ALSNALTLMLLPHGIFALSLATVMFPQLSRLDAAGDHEGFNQTTRNTLGTVLWAIIPAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH GLIMLATPIVQVLFQRGNFDSQSTLWVVQALMMYATALPAFGAAEILIRGFYARQETTIP HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHH VVIGVVTVALNIGLCWLLTQFSTSHIGLAGAFSITNNLELLLLLVMWRRRNGNLDATGQL HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCHHHHHHHHHHHHCCCCCCHHHHH RRSLLITLVSSLAMVLVLQAPVLALLLVGLLMLNYAWRRWGRQRWPQAGQAPIWLGLALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH TLAGLGLGWQLQLFDLATWLQIAPQAQSLWRLLGSLVFNGLLAIAVYFGCSSVLGASEAA HHHHCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VWQRRILGRLKRR HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]