Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159896825

Identifier: 159896825

GI number: 159896825

Start: 344753

End: 345178

Strand: Direct

Name: 159896825

Synonym: Haur_0292

Alternate gene names: NA

Gene position: 344753-345178 (Clockwise)

Preceding gene: 159896824

Following gene: 159896830

Centisome position: 5.43

GC content: 41.08

Gene sequence:

>426_bases
ATGGCGAATCGACGGATTTCAACGATTGTGATGGCAGTTTTGGGTGTTTTGATGCTGGTTGGTTTATTCTTACCTTATCT
GAAAAGTACCACAACCGATTTTTCAATCAGCGTTTTCCAGACCTTTGGTAGCGATCTTAAAGGGCTTGTTCCAGAAGATA
GCAAAACACTCTATATGATTATTGCGGCAGCGGTGGCAGTTGGTGGTTTATTTGCCTTATTGAGTCTTACTGGCAAGAAA
GTTTTTGGAGTATTCAGTATTATCGTTAGTTTTCTGATTGCGGCATTTCATGGTTTATTGACGGCTGGTTTGTCGGGAGA
ACGTGATGTTGTGCAAGGTTTAGGGTTTTGGTTGCTCTTAGGGGTTAGTTTAGCGCTATTTATTACAAGTATTGTATTTG
TAGCCCGCAAACCCAAACTTGCCTAA

Upstream 100 bases:

>100_bases
CTAATTCACACTCCCATTGCTCAATCGGTGACAGAAATTGACACATTCGCCAATTATAGTGCCTACATCAACAGATAAAT
ATGTATGGAGGAACGTAATC

Downstream 100 bases:

>100_bases
TTCGTAGTTCGAAGCGCGGCGGCAGTTCCACCTAACTGCCGCCGTTTTGTATTTAACTATTCGATTTGGCAAATGGCAGA
TACATTCGGAAATTGAGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MANRRISTIVMAVLGVLMLVGLFLPYLKSTTTDFSISVFQTFGSDLKGLVPEDSKTLYMIIAAAVAVGGLFALLSLTGKK
VFGVFSIIVSFLIAAFHGLLTAGLSGERDVVQGLGFWLLLGVSLALFITSIVFVARKPKLA

Sequences:

>Translated_141_residues
MANRRISTIVMAVLGVLMLVGLFLPYLKSTTTDFSISVFQTFGSDLKGLVPEDSKTLYMIIAAAVAVGGLFALLSLTGKK
VFGVFSIIVSFLIAAFHGLLTAGLSGERDVVQGLGFWLLLGVSLALFITSIVFVARKPKLA
>Mature_140_residues
ANRRISTIVMAVLGVLMLVGLFLPYLKSTTTDFSISVFQTFGSDLKGLVPEDSKTLYMIIAAAVAVGGLFALLSLTGKKV
FGVFSIIVSFLIAAFHGLLTAGLSGERDVVQGLGFWLLLGVSLALFITSIVFVARKPKLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14972; Mature: 14841

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANRRISTIVMAVLGVLMLVGLFLPYLKSTTTDFSISVFQTFGSDLKGLVPEDSKTLYMI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHCCCCCCCCCHHHHH
IAAAVAVGGLFALLSLTGKKVFGVFSIIVSFLIAAFHGLLTAGLSGERDVVQGLGFWLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
GVSLALFITSIVFVARKPKLA
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ANRRISTIVMAVLGVLMLVGLFLPYLKSTTTDFSISVFQTFGSDLKGLVPEDSKTLYMI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHCCCCCCCCCHHHHH
IAAAVAVGGLFALLSLTGKKVFGVFSIIVSFLIAAFHGLLTAGLSGERDVVQGLGFWLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
GVSLALFITSIVFVARKPKLA
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA