| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896818
Identifier: 159896818
GI number: 159896818
Start: 333436
End: 334392
Strand: Direct
Name: 159896818
Synonym: Haur_0285
Alternate gene names: NA
Gene position: 333436-334392 (Clockwise)
Preceding gene: 159896817
Following gene: 159896819
Centisome position: 5.25
GC content: 54.34
Gene sequence:
>957_bases ATGATGATGCAACCTAATCGACTCGATCTCTTCGCACGCCATCCAGCCAACCCGATTTTACAAGCAAGCGATTGGCCGTA CCCGATTAATAGCGTGTTTAACCCTGGTGCAACCGTGCTCGCCGATGGGACGACCTTGTTATTATGCCGCGTTGAAGATC GGCGTGGCCATTCGCATTTTTGTGCAGCTCGCTCGGCCAATGGGCTTGATCATTGGCAAATTGATGCCCACCCAACCTTT GCCCCCGATCCACAGCAGTATCCCGAAGAACGCTGGGGGATTGAAGATCCACGCATTACCTATCTTGAGGAATTAGCGGC CTATGGGGTTGTATATACCTCCTATGCGACTGGTGGGCCTGGGGTTTCCTTGGCAACCACCACCGATTTCAAGACCTTTA CCCGCTATGGGGTCGTGATGCAGCCCGAAAATAAAGATGCGGCGCTCTTTCCAGTGCGGATTAACGGCTTATGGGCGATG ATCCATCGCCCAATTGGCGCACAAGGGTCGCATATTTGGATGTCGCTCTCACCGGATTTGCGCCATTGGGGCCAACACCA ATGTATGCTTGAGGCTCGTAAAGGCGGATGGTGGGATGCTAATAAAATTGGGTTGTCGCCACCGCCGATCGCCACCGAGG AAGGCTGGTTGATGATCTATCATGGCGTTCGGATGACTCCTGGTGGGTGTCTCTATCGGCTTGGCGTAGCCCTGTTCGAT ACCGAACATCCTGAGCGCTGTCTGCGGCGTGGCGAACCATGGGTCTTGAGTCCGCACACGGAGTATGAACGCCATGGTGA TGTCCCCAATGTGATTTTCCCCTGTGGCGTGACCGTCCTGCCGGATGGCGATACCCTCCATGTCTATTATGGAGCCGCCG ATAGCTGCGTTGCGGTTGCGATTGGAAGTATTCGCCAGATTCTTGATTGGCTGACGATCTATGGAGTGGCGACGTAA
Upstream 100 bases:
>100_bases GTCACCCGACCACCGCGCATTCGAGCGGATTTGATTCCGCCACGTGATCCCAATCCATCAAGACCATTGTAGTGTCTCTT GGCGAGGCAGTCTGGAATAC
Downstream 100 bases:
>100_bases GCCTAGGCCGCTGGATTGCTTGAAGGCTGGTTGGGCAACTGAACCGCGAACATGGTATCAAGCTAATTGGAAGAAGATCG AGTTTCAGTCGTTCTCCTAG
Product: glycosidase-like protein
Products: NA
Alternate protein names: Glycosidase Related Protein; Glycosylase; Glycosidase-Like Protein; Conserved Domain Protein; Glycosidase-Related; Glycosidase-Related Protein; Cytoplasmic Protein; Glycosylase-Like Protein; Unknwon Conserved Protein
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MMMQPNRLDLFARHPANPILQASDWPYPINSVFNPGATVLADGTTLLLCRVEDRRGHSHFCAARSANGLDHWQIDAHPTF APDPQQYPEERWGIEDPRITYLEELAAYGVVYTSYATGGPGVSLATTTDFKTFTRYGVVMQPENKDAALFPVRINGLWAM IHRPIGAQGSHIWMSLSPDLRHWGQHQCMLEARKGGWWDANKIGLSPPPIATEEGWLMIYHGVRMTPGGCLYRLGVALFD TEHPERCLRRGEPWVLSPHTEYERHGDVPNVIFPCGVTVLPDGDTLHVYYGAADSCVAVAIGSIRQILDWLTIYGVAT
Sequences:
>Translated_318_residues MMMQPNRLDLFARHPANPILQASDWPYPINSVFNPGATVLADGTTLLLCRVEDRRGHSHFCAARSANGLDHWQIDAHPTF APDPQQYPEERWGIEDPRITYLEELAAYGVVYTSYATGGPGVSLATTTDFKTFTRYGVVMQPENKDAALFPVRINGLWAM IHRPIGAQGSHIWMSLSPDLRHWGQHQCMLEARKGGWWDANKIGLSPPPIATEEGWLMIYHGVRMTPGGCLYRLGVALFD TEHPERCLRRGEPWVLSPHTEYERHGDVPNVIFPCGVTVLPDGDTLHVYYGAADSCVAVAIGSIRQILDWLTIYGVAT >Mature_318_residues MMMQPNRLDLFARHPANPILQASDWPYPINSVFNPGATVLADGTTLLLCRVEDRRGHSHFCAARSANGLDHWQIDAHPTF APDPQQYPEERWGIEDPRITYLEELAAYGVVYTSYATGGPGVSLATTTDFKTFTRYGVVMQPENKDAALFPVRINGLWAM IHRPIGAQGSHIWMSLSPDLRHWGQHQCMLEARKGGWWDANKIGLSPPPIATEEGWLMIYHGVRMTPGGCLYRLGVALFD TEHPERCLRRGEPWVLSPHTEYERHGDVPNVIFPCGVTVLPDGDTLHVYYGAADSCVAVAIGSIRQILDWLTIYGVAT
Specific function: Unknown
COG id: COG2152
COG function: function code G; Predicted glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35503; Mature: 35503
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMQPNRLDLFARHPANPILQASDWPYPINSVFNPGATVLADGTTLLLCRVEDRRGHSHF CCCCCCCCEEEEECCCCCCEECCCCCCCHHHHCCCCCEEEECCCEEEEEEEECCCCCCEE CAARSANGLDHWQIDAHPTFAPDPQQYPEERWGIEDPRITYLEELAAYGVVYTSYATGGP EEECCCCCCCEEEECCCCCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHCEEEEEECCCCC GVSLATTTDFKTFTRYGVVMQPENKDAALFPVRINGLWAMIHRPIGAQGSHIWMSLSPDL CEEEEEECCCHHHHHCCCEECCCCCCCEEEEEEECCEEEEEECCCCCCCCEEEEEECHHH RHWGQHQCMLEARKGGWWDANKIGLSPPPIATEEGWLMIYHGVRMTPGGCLYRLGVALFD HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCCCHHHHHCCCEEC TEHPERCLRRGEPWVLSPHTEYERHGDVPNVIFPCGVTVLPDGDTLHVYYGAADSCVAVA CCCHHHHHHCCCCEEECCCCCHHHCCCCCCEEECCCEEEECCCCEEEEEECCCCCHHHHH IGSIRQILDWLTIYGVAT HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMMQPNRLDLFARHPANPILQASDWPYPINSVFNPGATVLADGTTLLLCRVEDRRGHSHF CCCCCCCCEEEEECCCCCCEECCCCCCCHHHHCCCCCEEEECCCEEEEEEEECCCCCCEE CAARSANGLDHWQIDAHPTFAPDPQQYPEERWGIEDPRITYLEELAAYGVVYTSYATGGP EEECCCCCCCEEEECCCCCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHCEEEEEECCCCC GVSLATTTDFKTFTRYGVVMQPENKDAALFPVRINGLWAMIHRPIGAQGSHIWMSLSPDL CEEEEEECCCHHHHHCCCEECCCCCCCEEEEEEECCEEEEEECCCCCCCCEEEEEECHHH RHWGQHQCMLEARKGGWWDANKIGLSPPPIATEEGWLMIYHGVRMTPGGCLYRLGVALFD HHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCCCHHHHHCCCEEC TEHPERCLRRGEPWVLSPHTEYERHGDVPNVIFPCGVTVLPDGDTLHVYYGAADSCVAVA CCCHHHHHHCCCCEEECCCCCHHHCCCCCCEEECCCEEEECCCCEEEEEECCCCCHHHHH IGSIRQILDWLTIYGVAT HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA