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The map label for this gene is pecM [H]

Identifier: 159896819

GI number: 159896819

Start: 334675

End: 335556

Strand: Direct

Name: pecM [H]

Synonym: Haur_0286

Alternate gene names: 159896819

Gene position: 334675-335556 (Clockwise)

Preceding gene: 159896818

Following gene: 159896821

Centisome position: 5.27

GC content: 54.99

Gene sequence:

>882_bases
ATGCTGTTAACGGCGATTGCTCCAATTTTGTGGGGCACAACCTATGTCATTACCACCGAGTGGCTGCCAGCCAACCGTCC
GTTGTTGGTCGGCGTAATGCGGGCCTTGCCGATTGGCTTGATCTTTTTGGCCTTGGGGCGGCAATTGCCCAAAGGCATTT
GGTGGTGGCGCTCGTTGGTGCTGGGCGCGTTGAATATTGGCTTCTTCTTCCCCTTATTATTTATTGCCGCCTACCGCTTG
CCTGGTGGTATCGCCGCTACGTTGGGCGCATTGCAACCATTTATCGTGGCGTTTTGGGGCTGGGTGGTGCTCAAAGAGCG
AGTCACTTCGCGCTTGCTGTTGATGGCGGGTTTAGGTGTGCTTGGGGTTGGCATGATGCTGCTCAATCCACAGGCTCAAC
TTGATGCTTGGGGCATGCTGGCAGCTTTTGGTGGCGCGATGCTCTATGGCGTGGGCATTACATTAAACAAACATTGGGGA
CGACCAGTGCCCTTATTGACCTATACCGCTTGGCAATTGGTGGTTGGCGGCCTGATGATTGTGCCAATTGCCCTGTTGAT
TGAAGGCCTACCGCCCGCCTTTACAACCAGCAATTGGCTGGGTTTTGGCTTGATTGGCCTCGTCAACACGGGCGTGGCTT
ATCTCTTTTGGTTTCGCGGCATCGAGCGCCTAAAAACATCCACCATGTCGTTTTTGATTTTGCTTAGCCCAGTTTCAGCG
ACCGTGCTAGGCTGGCTGGTACTCGATCAACGCCTGAGTTGGTTGCAAATGCTGGGCGCTTTGGTGGTACTGGCTAGCAT
CGTATTAAGCCAACTGCCGAGCCGCCAGCCCACCCCGCGTTTGCAGGTGCAACCAGCAGCTGACTCTGCCCTCACCCCCT
AG

Upstream 100 bases:

>100_bases
TATCTTCATGTCAAGCTAAATTGTCAATCCCATCACTATTGTCATTAGATAGTGCTGATGGGATTTAGCGAAGGCGGCGG
CGATGCAACGATTGTGGAAT

Downstream 100 bases:

>100_bases
CCCCCTAGCCCGCCTAGCGAGCGAGGGGGAATCCAACGGTCATGAAGCTTGGAATACCCCTCGCCCGCCGACGTGGGAGA
GGGGATGGGCGTGAGGGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MLLTAIAPILWGTTYVITTEWLPANRPLLVGVMRALPIGLIFLALGRQLPKGIWWWRSLVLGALNIGFFFPLLFIAAYRL
PGGIAATLGALQPFIVAFWGWVVLKERVTSRLLLMAGLGVLGVGMMLLNPQAQLDAWGMLAAFGGAMLYGVGITLNKHWG
RPVPLLTYTAWQLVVGGLMIVPIALLIEGLPPAFTTSNWLGFGLIGLVNTGVAYLFWFRGIERLKTSTMSFLILLSPVSA
TVLGWLVLDQRLSWLQMLGALVVLASIVLSQLPSRQPTPRLQVQPAADSALTP

Sequences:

>Translated_293_residues
MLLTAIAPILWGTTYVITTEWLPANRPLLVGVMRALPIGLIFLALGRQLPKGIWWWRSLVLGALNIGFFFPLLFIAAYRL
PGGIAATLGALQPFIVAFWGWVVLKERVTSRLLLMAGLGVLGVGMMLLNPQAQLDAWGMLAAFGGAMLYGVGITLNKHWG
RPVPLLTYTAWQLVVGGLMIVPIALLIEGLPPAFTTSNWLGFGLIGLVNTGVAYLFWFRGIERLKTSTMSFLILLSPVSA
TVLGWLVLDQRLSWLQMLGALVVLASIVLSQLPSRQPTPRLQVQPAADSALTP
>Mature_293_residues
MLLTAIAPILWGTTYVITTEWLPANRPLLVGVMRALPIGLIFLALGRQLPKGIWWWRSLVLGALNIGFFFPLLFIAAYRL
PGGIAATLGALQPFIVAFWGWVVLKERVTSRLLLMAGLGVLGVGMMLLNPQAQLDAWGMLAAFGGAMLYGVGITLNKHWG
RPVPLLTYTAWQLVVGGLMIVPIALLIEGLPPAFTTSNWLGFGLIGLVNTGVAYLFWFRGIERLKTSTMSFLILLSPVSA
TVLGWLVLDQRLSWLQMLGALVVLASIVLSQLPSRQPTPRLQVQPAADSALTP

Specific function: Involved in pectinase, cellulase, and blue pigment regulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31848; Mature: 31848

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTAIAPILWGTTYVITTEWLPANRPLLVGVMRALPIGLIFLALGRQLPKGIWWWRSLV
CHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LGALNIGFFFPLLFIAAYRLPGGIAATLGALQPFIVAFWGWVVLKERVTSRLLLMAGLGV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVGMMLLNPQAQLDAWGMLAAFGGAMLYGVGITLNKHWGRPVPLLTYTAWQLVVGGLMI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHH
VPIALLIEGLPPAFTTSNWLGFGLIGLVNTGVAYLFWFRGIERLKTSTMSFLILLSPVSA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLGWLVLDQRLSWLQMLGALVVLASIVLSQLPSRQPTPRLQVQPAADSALTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MLLTAIAPILWGTTYVITTEWLPANRPLLVGVMRALPIGLIFLALGRQLPKGIWWWRSLV
CHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LGALNIGFFFPLLFIAAYRLPGGIAATLGALQPFIVAFWGWVVLKERVTSRLLLMAGLGV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVGMMLLNPQAQLDAWGMLAAFGGAMLYGVGITLNKHWGRPVPLLTYTAWQLVVGGLMI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHH
VPIALLIEGLPPAFTTSNWLGFGLIGLVNTGVAYLFWFRGIERLKTSTMSFLILLSPVSA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLGWLVLDQRLSWLQMLGALVVLASIVLSQLPSRQPTPRLQVQPAADSALTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022282 [H]