| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is fchA [H]
Identifier: 159896796
GI number: 159896796
Start: 308571
End: 310058
Strand: Direct
Name: fchA [H]
Synonym: Haur_0263
Alternate gene names: 159896796
Gene position: 308571-310058 (Clockwise)
Preceding gene: 159896794
Following gene: 159896798
Centisome position: 4.86
GC content: 54.23
Gene sequence:
>1488_bases ATGGGCTTGGTCGAAAGTATTATGAATTTCAGCGAAGGTCGGCGCACCGAAGTTGTGCACGCCATTCGTGATGCAATTAC GGCTGTTGCCGGCGTGCAATTGCTCGATGTTCAATCCGACGCTGATCATAATCGCACGGTGATTAGTTTTGCGGGCGAGG CTGAAGCAGTTGGCGAAGCTGCTTTCCAAGCAACCCGCACCGCCCAAGGCTTAATTAATTTGGATACCCATCGCGGCGAA CACCCACGCATCGGCGCGACCGATGTCTTGCCATTTGTGCCACTTGGCCAAACCACGATGAAACAGTGTGTGGCCTTGGC TCGCAAAGTTGGCAAGCGCATTGGTGATGAATTGGGGATTGCGGTTTATTTGTATGAAGAGGCTGCGACCCGCCCCGAAC GTCAAAATTTGGCCGATGTGCGTAAGGGCGAATATGAGGCTTGGCGCAAAGCCATTGGGGTTGATCCGGCGCGGGAGCCA GATTTTGGCCCAGCCGTGGCGACACCTGCAGGCGCAACCGTGGTTGGGGCACGCCAGCCATTGATTGCCTACAACATCTA TTTAAATACCACCGATGTAGAAATTGCCAAAAAAATCGCTAAATCGATTCGCTATCTTGGCGGTGGCTTGCGCTATGTCA AAGCTTTGGGCTTGTTGGTCGATGGTCGCGCTCAAATCTCGATGAACTTGGTTAATTTCCGTGGAACGCCAATTCATCGA GTGCAGGAGTTAGTACGCGCCGAGGCCATGCGCTATGGCGTGACGATTACTGAGGGCGAAGTTATTGGGCTTGTGCCGCA AGATGCGCTGGTTGATGCTGCTGAGCATTATCTGCAACTCAATCGTTTTCGCCGCGACCAAGTGCTTGAATCGAAGTTGG CCGCGCCAAGTGCTGGCGATGACTGGTTGCCAACCAACACGTTCCAAGCCTTTGCAGCTGGGACACCAACGCCTGGTGGT GGTTCGGCGGCGGCCTTAGCTGGGGCTTTGGCTGGCTCGTTGGGCCAAATGGTGGCTAATTTAACCGTCAGCCGCAAAAA ATATGCAGCGGTCAAGCCCAGCATGCAAGCGGCCTTGGAGCGCTTGAGCGAAGCAACCACCAGCTTGGGCAAATTGGCTT TGTCCGATAGTGCCGCATTTAACGCCATCAGCGTCACGCGTAAATTGCCTGAAGAGCAGGCTGACCGAGCGCAACAATTG GCGGCGGCGATTGTGCATGCCTGTGAAGTTCCCTTGCAAGTGGCCCAACAAGCTGCCAGTTTGTTTGATGATTTATATCT GTTGGCGACCCAAGGCAACGTCAATGCCCGCACCGATGCCCAAGTCGGCGGCTATTTGGCCTATGCCGCCGTCAATGGGG CTGGCTTAAATGTGTTGGTCAATCTTGGCGATTTAAGCGATGCTCAATTGCGTGAACAATTCAGCGCGGCGGTTGCCAAG CTGCGCCAACAAGCTGAGCAAGGCTTGCAAAAACTGACGACACTCTAG
Upstream 100 bases:
>100_bases GATGTCAATAAGCGATTAACGTTAATCGCCATTTGTTTAACCAAATTCTCACCATCTGAGCTATACTTGGGCGGTTGTGG TTCGTCAAAGGAGACATTCA
Downstream 100 bases:
>100_bases GCAGGGTTATGCTACAATGAGCACATAGATCAACTTCTGCGTATCGCGAGGAGATTTTTCAATGGCTCGTTGGCTTCTGA TTGTCGTTGGCTTAGCTGCT
Product: glutamate formiminotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MGLVESIMNFSEGRRTEVVHAIRDAITAVAGVQLLDVQSDADHNRTVISFAGEAEAVGEAAFQATRTAQGLINLDTHRGE HPRIGATDVLPFVPLGQTTMKQCVALARKVGKRIGDELGIAVYLYEEAATRPERQNLADVRKGEYEAWRKAIGVDPAREP DFGPAVATPAGATVVGARQPLIAYNIYLNTTDVEIAKKIAKSIRYLGGGLRYVKALGLLVDGRAQISMNLVNFRGTPIHR VQELVRAEAMRYGVTITEGEVIGLVPQDALVDAAEHYLQLNRFRRDQVLESKLAAPSAGDDWLPTNTFQAFAAGTPTPGG GSAAALAGALAGSLGQMVANLTVSRKKYAAVKPSMQAALERLSEATTSLGKLALSDSAAFNAISVTRKLPEEQADRAQQL AAAIVHACEVPLQVAQQAASLFDDLYLLATQGNVNARTDAQVGGYLAYAAVNGAGLNVLVNLGDLSDAQLREQFSAAVAK LRQQAEQGLQKLTTL
Sequences:
>Translated_495_residues MGLVESIMNFSEGRRTEVVHAIRDAITAVAGVQLLDVQSDADHNRTVISFAGEAEAVGEAAFQATRTAQGLINLDTHRGE HPRIGATDVLPFVPLGQTTMKQCVALARKVGKRIGDELGIAVYLYEEAATRPERQNLADVRKGEYEAWRKAIGVDPAREP DFGPAVATPAGATVVGARQPLIAYNIYLNTTDVEIAKKIAKSIRYLGGGLRYVKALGLLVDGRAQISMNLVNFRGTPIHR VQELVRAEAMRYGVTITEGEVIGLVPQDALVDAAEHYLQLNRFRRDQVLESKLAAPSAGDDWLPTNTFQAFAAGTPTPGG GSAAALAGALAGSLGQMVANLTVSRKKYAAVKPSMQAALERLSEATTSLGKLALSDSAAFNAISVTRKLPEEQADRAQQL AAAIVHACEVPLQVAQQAASLFDDLYLLATQGNVNARTDAQVGGYLAYAAVNGAGLNVLVNLGDLSDAQLREQFSAAVAK LRQQAEQGLQKLTTL >Mature_494_residues GLVESIMNFSEGRRTEVVHAIRDAITAVAGVQLLDVQSDADHNRTVISFAGEAEAVGEAAFQATRTAQGLINLDTHRGEH PRIGATDVLPFVPLGQTTMKQCVALARKVGKRIGDELGIAVYLYEEAATRPERQNLADVRKGEYEAWRKAIGVDPAREPD FGPAVATPAGATVVGARQPLIAYNIYLNTTDVEIAKKIAKSIRYLGGGLRYVKALGLLVDGRAQISMNLVNFRGTPIHRV QELVRAEAMRYGVTITEGEVIGLVPQDALVDAAEHYLQLNRFRRDQVLESKLAAPSAGDDWLPTNTFQAFAAGTPTPGGG SAAALAGALAGSLGQMVANLTVSRKKYAAVKPSMQAALERLSEATTSLGKLALSDSAAFNAISVTRKLPEEQADRAQQLA AAIVHACEVPLQVAQQAASLFDDLYLLATQGNVNARTDAQVGGYLAYAAVNGAGLNVLVNLGDLSDAQLREQFSAAVAKL RQQAEQGLQKLTTL
Specific function: Required for both C1 and C2 metabolism [H]
COG id: COG3643
COG function: function code E; Glutamate formiminotransferase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyclodeaminase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI46255035, Length=526, Percent_Identity=35.5513307984791, Blast_Score=271, Evalue=1e-72, Organism=Homo sapiens, GI11140815, Length=526, Percent_Identity=35.5513307984791, Blast_Score=271, Evalue=1e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007044 [H]
Pfam domain/function: PF04961 FTCD_C [H]
EC number: =3.5.4.9 [H]
Molecular weight: Translated: 52629; Mature: 52498
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLVESIMNFSEGRRTEVVHAIRDAITAVAGVQLLDVQSDADHNRTVISFAGEAEAVGEA CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCHHHHHHH AFQATRTAQGLINLDTHRGEHPRIGATDVLPFVPLGQTTMKQCVALARKVGKRIGDELGI HHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHCCE AVYLYEEAATRPERQNLADVRKGEYEAWRKAIGVDPAREPDFGPAVATPAGATVVGARQP EEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCC LIAYNIYLNTTDVEIAKKIAKSIRYLGGGLRYVKALGLLVDGRAQISMNLVNFRGTPIHR EEEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHH VQELVRAEAMRYGVTITEGEVIGLVPQDALVDAAEHYLQLNRFRRDQVLESKLAAPSAGD HHHHHHHHHHHHCCEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DWLPTNTFQAFAAGTPTPGGGSAAALAGALAGSLGQMVANLTVSRKKYAAVKPSMQAALE CCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RLSEATTSLGKLALSDSAAFNAISVTRKLPEEQADRAQQLAAAIVHACEVPLQVAQQAAS HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LFDDLYLLATQGNVNARTDAQVGGYLAYAAVNGAGLNVLVNLGDLSDAQLREQFSAAVAK HHHHHEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH LRQQAEQGLQKLTTL HHHHHHHHHHHHHCC >Mature Secondary Structure GLVESIMNFSEGRRTEVVHAIRDAITAVAGVQLLDVQSDADHNRTVISFAGEAEAVGEA CHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCHHHHHHH AFQATRTAQGLINLDTHRGEHPRIGATDVLPFVPLGQTTMKQCVALARKVGKRIGDELGI HHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHCCE AVYLYEEAATRPERQNLADVRKGEYEAWRKAIGVDPAREPDFGPAVATPAGATVVGARQP EEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCC LIAYNIYLNTTDVEIAKKIAKSIRYLGGGLRYVKALGLLVDGRAQISMNLVNFRGTPIHR EEEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHH VQELVRAEAMRYGVTITEGEVIGLVPQDALVDAAEHYLQLNRFRRDQVLESKLAAPSAGD HHHHHHHHHHHHCCEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DWLPTNTFQAFAAGTPTPGGGSAAALAGALAGSLGQMVANLTVSRKKYAAVKPSMQAALE CCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RLSEATTSLGKLALSDSAAFNAISVTRKLPEEQADRAQQLAAAIVHACEVPLQVAQQAAS HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LFDDLYLLATQGNVNARTDAQVGGYLAYAAVNGAGLNVLVNLGDLSDAQLREQFSAAVAK HHHHHEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHH LRQQAEQGLQKLTTL HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961516; 10215859 [H]