| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896741
Identifier: 159896741
GI number: 159896741
Start: 242902
End: 243648
Strand: Direct
Name: 159896741
Synonym: Haur_0208
Alternate gene names: NA
Gene position: 242902-243648 (Clockwise)
Preceding gene: 159896734
Following gene: 159896742
Centisome position: 3.83
GC content: 54.48
Gene sequence:
>747_bases ATGCGTCGGATATTGTTAATTTTCGTCGGATGGAGCTTAGTCGCCTGTGGTGGCACGACCAACAATCCCAGTGCAACGGC GGTTGCTAGCCTTGAGCCAACTTCCCAAGCGCTGGTGGCAAGTGTTGTGCCAACAAATACAATTGTGGCAACGCCTGCTG CTACGCCAACTCGTTTGCCCACCCAAACCGTTGCCCCCGAAGTTACTAGCAAGCCAGTTGAGCTTGATACGCCAACCCTG AACGACCAAAATGCGCCGCCCACCGCTGCGCCGCAGCCAACCGCCGATGCCAGCAATGCTCCGAGCCAGCCTGTACGGAT TGTGATCGACGCGATTGGGCTGGATCTTGCGCCTGTTTCAGTGGGCTTGGATCAACGCAATGTGCCAATTGTGCCCAAAC ACGATGCAGGCTGGTATAACCTGAGTGCCCAGCCGGGCCAAGGCGAAAATGTGGTGTTTTGGGGCCATGTGCTGCGCTGG AAGGATGCGCCGAATGTTCCAGCTCCCTTTGCGCGGGTCAAAGATGTGGCAATCGATGAGACAATCACGGTTTATAGTGC TGATGGGAGTGAATATCGCTATCGGGTGACCGAACAAGTCTGGGTCACACCTGATCAAGTTCAATATATTTTGCCCGTTG GCTCCGAGCGGCTAACCCTGGTTTCGTGCATTGGCGATCAAGTGATTGTTGAAGGCAATTTAGAAATGAGCCATCGCTTG ATTACGATCGCCGAGCCACTTCGCTGA
Upstream 100 bases:
>100_bases TGGCCGTTCGCTAAAGCATCATATTACATAATAAACATTACAATAGAGTTTACGCAATCTAAGCCAATTGGATGGATTGT TGAGCAAGGAGTTTTCTGGC
Downstream 100 bases:
>100_bases GGTTGTGCCAATGTCCGAAAGCCTGCCAAATTTGCATGTGCCAGCAGTTCAAACGTTAGGTGAGCGTTATAGCAAATTGC GTTTGTGGTGGTATATGTTT
Product: peptidase C60 sortase A and B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MRRILLIFVGWSLVACGGTTNNPSATAVASLEPTSQALVASVVPTNTIVATPAATPTRLPTQTVAPEVTSKPVELDTPTL NDQNAPPTAAPQPTADASNAPSQPVRIVIDAIGLDLAPVSVGLDQRNVPIVPKHDAGWYNLSAQPGQGENVVFWGHVLRW KDAPNVPAPFARVKDVAIDETITVYSADGSEYRYRVTEQVWVTPDQVQYILPVGSERLTLVSCIGDQVIVEGNLEMSHRL ITIAEPLR
Sequences:
>Translated_248_residues MRRILLIFVGWSLVACGGTTNNPSATAVASLEPTSQALVASVVPTNTIVATPAATPTRLPTQTVAPEVTSKPVELDTPTL NDQNAPPTAAPQPTADASNAPSQPVRIVIDAIGLDLAPVSVGLDQRNVPIVPKHDAGWYNLSAQPGQGENVVFWGHVLRW KDAPNVPAPFARVKDVAIDETITVYSADGSEYRYRVTEQVWVTPDQVQYILPVGSERLTLVSCIGDQVIVEGNLEMSHRL ITIAEPLR >Mature_248_residues MRRILLIFVGWSLVACGGTTNNPSATAVASLEPTSQALVASVVPTNTIVATPAATPTRLPTQTVAPEVTSKPVELDTPTL NDQNAPPTAAPQPTADASNAPSQPVRIVIDAIGLDLAPVSVGLDQRNVPIVPKHDAGWYNLSAQPGQGENVVFWGHVLRW KDAPNVPAPFARVKDVAIDETITVYSADGSEYRYRVTEQVWVTPDQVQYILPVGSERLTLVSCIGDQVIVEGNLEMSHRL ITIAEPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26538; Mature: 26538
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRILLIFVGWSLVACGGTTNNPSATAVASLEPTSQALVASVVPTNTIVATPAATPTRLP CCEEEEEEECCEEEEECCCCCCCCCEEEEECCCCHHHEEEEECCCCEEEECCCCCCCCCC TQTVAPEVTSKPVELDTPTLNDQNAPPTAAPQPTADASNAPSQPVRIVIDAIGLDLAPVS CHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEE VGLDQRNVPIVPKHDAGWYNLSAQPGQGENVVFWGHVLRWKDAPNVPAPFARVKDVAIDE ECCCCCCCCEEECCCCCEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHEEECC TITVYSADGSEYRYRVTEQVWVTPDQVQYILPVGSERLTLVSCIGDQVIVEGNLEMSHRL EEEEEECCCCCEEEEEEEEEEECHHHEEEEEECCCCCEEEEEECCCEEEEECCCCCCEEE ITIAEPLR EEEECCCC >Mature Secondary Structure MRRILLIFVGWSLVACGGTTNNPSATAVASLEPTSQALVASVVPTNTIVATPAATPTRLP CCEEEEEEECCEEEEECCCCCCCCCEEEEECCCCHHHEEEEECCCCEEEECCCCCCCCCC TQTVAPEVTSKPVELDTPTLNDQNAPPTAAPQPTADASNAPSQPVRIVIDAIGLDLAPVS CHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEE VGLDQRNVPIVPKHDAGWYNLSAQPGQGENVVFWGHVLRWKDAPNVPAPFARVKDVAIDE ECCCCCCCCEEECCCCCEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHEEECC TITVYSADGSEYRYRVTEQVWVTPDQVQYILPVGSERLTLVSCIGDQVIVEGNLEMSHRL EEEEEECCCCCEEEEEEEEEEECHHHEEEEEECCCCCEEEEEECCCEEEEECCCCCCEEE ITIAEPLR EEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA