| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896730
Identifier: 159896730
GI number: 159896730
Start: 232536
End: 233366
Strand: Reverse
Name: 159896730
Synonym: Haur_0197
Alternate gene names: NA
Gene position: 233366-232536 (Counterclockwise)
Preceding gene: 159896731
Following gene: 159896716
Centisome position: 3.68
GC content: 35.38
Gene sequence:
>831_bases ATGAAACAGCCTGATATACTTCCTAACACAAAAGTATTAATTTCGGTTAAAACATACCCCTTACCTTCTCACAAATATGA TGAATTAGTATGCACTGCTGGATTTCTTGAAGATGGATCATGGATTAGAGTTTATCCAGTTCCATTTCGTGGACTACCTT ATCATCAACAATATCAAAAATGGCATTGGGTTACTGTTGATTTAATAAAGAACACCCAAGACCATCGTCCAGAAAGCTAT CGGCCAACTTCTCAATTAGATATTGGAGAAAACATTCCAACAACGAATAATTGGATTTTACGCAAACAGTATGCCTTGCG TAATGTTTATACTTCAATGACTGATCTATTAGGTGATTTAAAAACTAAGAATACTTCATTAGCTACAGTAAAGCCTAGTG AAATTATCGATTTTGTTATTGAGCCGACTGAGCGAGATTGGAAAGAGTCATGGCGTAATCAAATGCTACAATTTAGTTTA TTTGATATGGATGATAAAGGGCAAGGTCGTGAGCGCAAAGTTATTCGCAAGCTCCCTTATAAATACTTTTATAAATTCCG AACGCATGGAGATCAAAATCCACGTAAACTAATGATCGAAGACTGGGAACTAGGTGCTTTATATTGGAATTGTCTAAAAA CTTGTAATGGAGATGAAAATGAGGCTAATAAACTTGTACGCCAGAAATATTTCGATACCTTCGTACAGCAGAATGATATT CATCTATTTTTAGGCACAACCCTACAATATCATTTTGTAGCCCCTAACCCTTTTGTAATTATAGGAGTCTTTTATCCAAA AATTGAAACCCAAGGGCGAATGGAGTTGTAA
Upstream 100 bases:
>100_bases TCAAAAATGCCTTAGAAGTTCTAAGGCATTTTGTTTATATATTACCAATTATGGTATAGTTCTCATATAAAGTATTGCCT CAATTAATGGAGTTATATCG
Downstream 100 bases:
>100_bases GTTATCGTTTAAGTACTGAGAGCAGCATTTTGGGCTGACCCCAACGCCAAACGCAGCCCAACCACACGCCAACAATCAGC AATTTCAGCCCAATTAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKQPDILPNTKVLISVKTYPLPSHKYDELVCTAGFLEDGSWIRVYPVPFRGLPYHQQYQKWHWVTVDLIKNTQDHRPESY RPTSQLDIGENIPTTNNWILRKQYALRNVYTSMTDLLGDLKTKNTSLATVKPSEIIDFVIEPTERDWKESWRNQMLQFSL FDMDDKGQGRERKVIRKLPYKYFYKFRTHGDQNPRKLMIEDWELGALYWNCLKTCNGDENEANKLVRQKYFDTFVQQNDI HLFLGTTLQYHFVAPNPFVIIGVFYPKIETQGRMEL
Sequences:
>Translated_276_residues MKQPDILPNTKVLISVKTYPLPSHKYDELVCTAGFLEDGSWIRVYPVPFRGLPYHQQYQKWHWVTVDLIKNTQDHRPESY RPTSQLDIGENIPTTNNWILRKQYALRNVYTSMTDLLGDLKTKNTSLATVKPSEIIDFVIEPTERDWKESWRNQMLQFSL FDMDDKGQGRERKVIRKLPYKYFYKFRTHGDQNPRKLMIEDWELGALYWNCLKTCNGDENEANKLVRQKYFDTFVQQNDI HLFLGTTLQYHFVAPNPFVIIGVFYPKIETQGRMEL >Mature_276_residues MKQPDILPNTKVLISVKTYPLPSHKYDELVCTAGFLEDGSWIRVYPVPFRGLPYHQQYQKWHWVTVDLIKNTQDHRPESY RPTSQLDIGENIPTTNNWILRKQYALRNVYTSMTDLLGDLKTKNTSLATVKPSEIIDFVIEPTERDWKESWRNQMLQFSL FDMDDKGQGRERKVIRKLPYKYFYKFRTHGDQNPRKLMIEDWELGALYWNCLKTCNGDENEANKLVRQKYFDTFVQQNDI HLFLGTTLQYHFVAPNPFVIIGVFYPKIETQGRMEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32781; Mature: 32781
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQPDILPNTKVLISVKTYPLPSHKYDELVCTAGFLEDGSWIRVYPVPFRGLPYHQQYQK CCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECEECCCCEEEEEECCCCCCCCHHHHCC WHWVTVDLIKNTQDHRPESYRPTSQLDIGENIPTTNNWILRKQYALRNVYTSMTDLLGDL EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH KTKNTSLATVKPSEIIDFVIEPTERDWKESWRNQMLQFSLFDMDDKGQGRERKVIRKLPY CCCCCEEEEECHHHHEEEEECCCCHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHCCH KYFYKFRTHGDQNPRKLMIEDWELGALYWNCLKTCNGDENEANKLVRQKYFDTFVQQNDI HHEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCE HLFLGTTLQYHFVAPNPFVIIGVFYPKIETQGRMEL EEEEECEEEEEEECCCCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MKQPDILPNTKVLISVKTYPLPSHKYDELVCTAGFLEDGSWIRVYPVPFRGLPYHQQYQK CCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECEECCCCEEEEEECCCCCCCCHHHHCC WHWVTVDLIKNTQDHRPESYRPTSQLDIGENIPTTNNWILRKQYALRNVYTSMTDLLGDL EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH KTKNTSLATVKPSEIIDFVIEPTERDWKESWRNQMLQFSLFDMDDKGQGRERKVIRKLPY CCCCCEEEEECHHHHEEEEECCCCHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHCCH KYFYKFRTHGDQNPRKLMIEDWELGALYWNCLKTCNGDENEANKLVRQKYFDTFVQQNDI HHEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCE HLFLGTTLQYHFVAPNPFVIIGVFYPKIETQGRMEL EEEEECEEEEEEECCCCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA