The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159896730

Identifier: 159896730

GI number: 159896730

Start: 232536

End: 233366

Strand: Reverse

Name: 159896730

Synonym: Haur_0197

Alternate gene names: NA

Gene position: 233366-232536 (Counterclockwise)

Preceding gene: 159896731

Following gene: 159896716

Centisome position: 3.68

GC content: 35.38

Gene sequence:

>831_bases
ATGAAACAGCCTGATATACTTCCTAACACAAAAGTATTAATTTCGGTTAAAACATACCCCTTACCTTCTCACAAATATGA
TGAATTAGTATGCACTGCTGGATTTCTTGAAGATGGATCATGGATTAGAGTTTATCCAGTTCCATTTCGTGGACTACCTT
ATCATCAACAATATCAAAAATGGCATTGGGTTACTGTTGATTTAATAAAGAACACCCAAGACCATCGTCCAGAAAGCTAT
CGGCCAACTTCTCAATTAGATATTGGAGAAAACATTCCAACAACGAATAATTGGATTTTACGCAAACAGTATGCCTTGCG
TAATGTTTATACTTCAATGACTGATCTATTAGGTGATTTAAAAACTAAGAATACTTCATTAGCTACAGTAAAGCCTAGTG
AAATTATCGATTTTGTTATTGAGCCGACTGAGCGAGATTGGAAAGAGTCATGGCGTAATCAAATGCTACAATTTAGTTTA
TTTGATATGGATGATAAAGGGCAAGGTCGTGAGCGCAAAGTTATTCGCAAGCTCCCTTATAAATACTTTTATAAATTCCG
AACGCATGGAGATCAAAATCCACGTAAACTAATGATCGAAGACTGGGAACTAGGTGCTTTATATTGGAATTGTCTAAAAA
CTTGTAATGGAGATGAAAATGAGGCTAATAAACTTGTACGCCAGAAATATTTCGATACCTTCGTACAGCAGAATGATATT
CATCTATTTTTAGGCACAACCCTACAATATCATTTTGTAGCCCCTAACCCTTTTGTAATTATAGGAGTCTTTTATCCAAA
AATTGAAACCCAAGGGCGAATGGAGTTGTAA

Upstream 100 bases:

>100_bases
TCAAAAATGCCTTAGAAGTTCTAAGGCATTTTGTTTATATATTACCAATTATGGTATAGTTCTCATATAAAGTATTGCCT
CAATTAATGGAGTTATATCG

Downstream 100 bases:

>100_bases
GTTATCGTTTAAGTACTGAGAGCAGCATTTTGGGCTGACCCCAACGCCAAACGCAGCCCAACCACACGCCAACAATCAGC
AATTTCAGCCCAATTAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MKQPDILPNTKVLISVKTYPLPSHKYDELVCTAGFLEDGSWIRVYPVPFRGLPYHQQYQKWHWVTVDLIKNTQDHRPESY
RPTSQLDIGENIPTTNNWILRKQYALRNVYTSMTDLLGDLKTKNTSLATVKPSEIIDFVIEPTERDWKESWRNQMLQFSL
FDMDDKGQGRERKVIRKLPYKYFYKFRTHGDQNPRKLMIEDWELGALYWNCLKTCNGDENEANKLVRQKYFDTFVQQNDI
HLFLGTTLQYHFVAPNPFVIIGVFYPKIETQGRMEL

Sequences:

>Translated_276_residues
MKQPDILPNTKVLISVKTYPLPSHKYDELVCTAGFLEDGSWIRVYPVPFRGLPYHQQYQKWHWVTVDLIKNTQDHRPESY
RPTSQLDIGENIPTTNNWILRKQYALRNVYTSMTDLLGDLKTKNTSLATVKPSEIIDFVIEPTERDWKESWRNQMLQFSL
FDMDDKGQGRERKVIRKLPYKYFYKFRTHGDQNPRKLMIEDWELGALYWNCLKTCNGDENEANKLVRQKYFDTFVQQNDI
HLFLGTTLQYHFVAPNPFVIIGVFYPKIETQGRMEL
>Mature_276_residues
MKQPDILPNTKVLISVKTYPLPSHKYDELVCTAGFLEDGSWIRVYPVPFRGLPYHQQYQKWHWVTVDLIKNTQDHRPESY
RPTSQLDIGENIPTTNNWILRKQYALRNVYTSMTDLLGDLKTKNTSLATVKPSEIIDFVIEPTERDWKESWRNQMLQFSL
FDMDDKGQGRERKVIRKLPYKYFYKFRTHGDQNPRKLMIEDWELGALYWNCLKTCNGDENEANKLVRQKYFDTFVQQNDI
HLFLGTTLQYHFVAPNPFVIIGVFYPKIETQGRMEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32781; Mature: 32781

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQPDILPNTKVLISVKTYPLPSHKYDELVCTAGFLEDGSWIRVYPVPFRGLPYHQQYQK
CCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECEECCCCEEEEEECCCCCCCCHHHHCC
WHWVTVDLIKNTQDHRPESYRPTSQLDIGENIPTTNNWILRKQYALRNVYTSMTDLLGDL
EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
KTKNTSLATVKPSEIIDFVIEPTERDWKESWRNQMLQFSLFDMDDKGQGRERKVIRKLPY
CCCCCEEEEECHHHHEEEEECCCCHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHCCH
KYFYKFRTHGDQNPRKLMIEDWELGALYWNCLKTCNGDENEANKLVRQKYFDTFVQQNDI
HHEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCE
HLFLGTTLQYHFVAPNPFVIIGVFYPKIETQGRMEL
EEEEECEEEEEEECCCCEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKQPDILPNTKVLISVKTYPLPSHKYDELVCTAGFLEDGSWIRVYPVPFRGLPYHQQYQK
CCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECEECCCCEEEEEECCCCCCCCHHHHCC
WHWVTVDLIKNTQDHRPESYRPTSQLDIGENIPTTNNWILRKQYALRNVYTSMTDLLGDL
EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
KTKNTSLATVKPSEIIDFVIEPTERDWKESWRNQMLQFSLFDMDDKGQGRERKVIRKLPY
CCCCCEEEEECHHHHEEEEECCCCHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHCCH
KYFYKFRTHGDQNPRKLMIEDWELGALYWNCLKTCNGDENEANKLVRQKYFDTFVQQNDI
HHEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCE
HLFLGTTLQYHFVAPNPFVIIGVFYPKIETQGRMEL
EEEEECEEEEEEECCCCEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA