| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896715
Identifier: 159896715
GI number: 159896715
Start: 211248
End: 211928
Strand: Reverse
Name: 159896715
Synonym: Haur_0182
Alternate gene names: NA
Gene position: 211928-211248 (Counterclockwise)
Preceding gene: 159896716
Following gene: 159896714
Centisome position: 3.34
GC content: 53.3
Gene sequence:
>681_bases ATGTCGTCCGTGCATGAAACGCATTTATTGGCTGAAGGTATTACTGCCGCCAAAGCAGGCCAACGTGCAGCAGCCCGTGA TTTCCTGACCCAAGTGATTGCGCTAAATGCACGGAACGAACTAGCGTGGCTCTGGATGAGTGCGATTGTCGATACGCCTG AACAACGCCGCGATTGCCTTGTACGGGTTTTGTTGATCAACCCAAGCAACGAAGCCGCGCAACGCGGCATTGCGGCCCTT GAAGTGCAAAACAAACCAGCCCCGTCAATGCCTGAGCCAACGCCAATTGTGGCGATCGCCGCTGCCAGCAGCAACCTGAT TCAATGCCCATTTTGCCAAGCGAATACCGATAGTAGCAAGCTCGATTGCCAAGTTTGTGGCGAAAATATCATCCTCACCT GCCCCTCATGTGATAGTACAATAAACTTATGGGAAACCACTCGCTGCCCATGCGGCGAAGGGTTACGTCACTACATTTTC TTTCCCGATGGCATCGATCACGAAGGGCTAGGCCAGCGCTATGCCTTGATGGAGCGCTGGGAACCTGCTGCTCGCCAATG GGATCGAGCACTCAAAGATGGCTCGCATGTGGTGATGTTGCACCGAAAATTGGCCCAAGCCTACGATAAGATTGGTCGCA ACCAAGAGGCCGAGTTTCACCGCCAAGTGGCTCAATCCTAA
Upstream 100 bases:
>100_bases GGGGAATTACAACACCATCAACCAAGCAGCGACGTGGCTAGCCCAGTGCAAGAATGGATCGCACTCGAACCACGTTAGAT TATAGATAGAAGGAGTTCCT
Downstream 100 bases:
>100_bases TTCCTTAGCCAATCTTTACTTGCATCAAGCCAAATCTATGTCAAAATCGGTGTATCCTTGAAAATAGCCAATGAATGTCT CTTTAGCGATGGATTACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSSVHETHLLAEGITAAKAGQRAAARDFLTQVIALNARNELAWLWMSAIVDTPEQRRDCLVRVLLINPSNEAAQRGIAAL EVQNKPAPSMPEPTPIVAIAAASSNLIQCPFCQANTDSSKLDCQVCGENIILTCPSCDSTINLWETTRCPCGEGLRHYIF FPDGIDHEGLGQRYALMERWEPAARQWDRALKDGSHVVMLHRKLAQAYDKIGRNQEAEFHRQVAQS
Sequences:
>Translated_226_residues MSSVHETHLLAEGITAAKAGQRAAARDFLTQVIALNARNELAWLWMSAIVDTPEQRRDCLVRVLLINPSNEAAQRGIAAL EVQNKPAPSMPEPTPIVAIAAASSNLIQCPFCQANTDSSKLDCQVCGENIILTCPSCDSTINLWETTRCPCGEGLRHYIF FPDGIDHEGLGQRYALMERWEPAARQWDRALKDGSHVVMLHRKLAQAYDKIGRNQEAEFHRQVAQS >Mature_225_residues SSVHETHLLAEGITAAKAGQRAAARDFLTQVIALNARNELAWLWMSAIVDTPEQRRDCLVRVLLINPSNEAAQRGIAALE VQNKPAPSMPEPTPIVAIAAASSNLIQCPFCQANTDSSKLDCQVCGENIILTCPSCDSTINLWETTRCPCGEGLRHYIFF PDGIDHEGLGQRYALMERWEPAARQWDRALKDGSHVVMLHRKLAQAYDKIGRNQEAEFHRQVAQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25060; Mature: 24929
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVHETHLLAEGITAAKAGQRAAARDFLTQVIALNARNELAWLWMSAIVDTPEQRRDCL CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHE VRVLLINPSNEAAQRGIAALEVQNKPAPSMPEPTPIVAIAAASSNLIQCPFCQANTDSSK EEEEEECCCCHHHHCCEEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCC LDCQVCGENIILTCPSCDSTINLWETTRCPCGEGLRHYIFFPDGIDHEGLGQRYALMERW CCCEECCCCEEEECCCCCCCEEHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHC EPAARQWDRALKDGSHVVMLHRKLAQAYDKIGRNQEAEFHRQVAQS CHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure SSVHETHLLAEGITAAKAGQRAAARDFLTQVIALNARNELAWLWMSAIVDTPEQRRDCL CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHE VRVLLINPSNEAAQRGIAALEVQNKPAPSMPEPTPIVAIAAASSNLIQCPFCQANTDSSK EEEEEECCCCHHHHCCEEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCC LDCQVCGENIILTCPSCDSTINLWETTRCPCGEGLRHYIFFPDGIDHEGLGQRYALMERW CCCEECCCCEEEECCCCCCCEEHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHC EPAARQWDRALKDGSHVVMLHRKLAQAYDKIGRNQEAEFHRQVAQS CHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA