| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896676
Identifier: 159896676
GI number: 159896676
Start: 175336
End: 176115
Strand: Direct
Name: 159896676
Synonym: Haur_0143
Alternate gene names: NA
Gene position: 175336-176115 (Clockwise)
Preceding gene: 159896675
Following gene: 159896684
Centisome position: 2.76
GC content: 55.9
Gene sequence:
>780_bases ATGAGCCTTAAGTATCTCTTGATCGGGGCATTAACTCGCGATCGTACAGCAACTGGCTGGCAGCAAGGTGGTACTGGCAC ATTTGCAGCGCGAGCACTAGCCGCTTGGGGGGTTGCAACCACGATCATCACGCCAGCCCACGCCAAGCTAATTTTCGATT TGCCAAGCACCAGCACGCTCGTGCGTTTGCCTAGCCGCGCCACTGCCACCTTTGAAAATCGCTATCAGGGTGATGCTCGC ACGCAATGGCTGCATGCCGCGCCAACCCAATTGGATTGGGCGAATCTTGCGCCATATTGGCAACAAGCCAGCTTAGTGCA TCTTGCGCCCTTGGCCCAAGAATTAACCACAATTCCGCCGCGCAAGCTTTTTCCGCAGGCCTTGATTGGCTTGACGGCTC AGGGTTGGCTCAGGCATTGGGATAGTTCAGGCCGAATCCAACCAAAACGTTGGCAACCAACCCCAACTGAGCTAGCCCAA ATTGATGCGTTGGTGGTGAGCGATGAGGATGTTGCTGGCGATGTGCAGCTCGTTGCTGATTGGGCGCAACACTGTGGTTT GGTCGCAATGACCCAAGGCTCACGCGGCGCAACGATTTGGGTTAATGCTGAGGTTCAGCATGTCGCGGCTTATCCAGCGC AAGTGAGCGACCCAACCGGAGCGGGCGATGTGTGGGCGGCAGCTTGGTTTTGGCGCATTCAGCAGGGGAGTTCGGCCTTG CAAGCCGCTGATTGGGCTTGCCAACAAGCTGCCTTGCAAATTAGTGGCCAATTGATTTAA
Upstream 100 bases:
>100_bases AATATGTCTTCAATATCACCTACCGCGCCTATCTTGACCCATTTGTGTTTATGCGCGGCAGCCCACAGCATACCATTCAC TTGCCGTTGGAGCAGACCCC
Downstream 100 bases:
>100_bases AACCCCTCACCCCAACCCCTCGCCCACTGCGGCGGGTGAGGGGCTTTTGATTTGGTGGTTCCCCCTCGCCTCGCTGGGCG GGAGAGAGGGCAGGTCTTTC
Product: ribokinase-like domain-containing protein
Products: NA
Alternate protein names: PfkB Domain Protein; PfkB Domain-Containing Protein; Carbohydrate Kinase Pfkb Family; Carbohydrate Kinase PfkB
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSLKYLLIGALTRDRTATGWQQGGTGTFAARALAAWGVATTIITPAHAKLIFDLPSTSTLVRLPSRATATFENRYQGDAR TQWLHAAPTQLDWANLAPYWQQASLVHLAPLAQELTTIPPRKLFPQALIGLTAQGWLRHWDSSGRIQPKRWQPTPTELAQ IDALVVSDEDVAGDVQLVADWAQHCGLVAMTQGSRGATIWVNAEVQHVAAYPAQVSDPTGAGDVWAAAWFWRIQQGSSAL QAADWACQQAALQISGQLI
Sequences:
>Translated_259_residues MSLKYLLIGALTRDRTATGWQQGGTGTFAARALAAWGVATTIITPAHAKLIFDLPSTSTLVRLPSRATATFENRYQGDAR TQWLHAAPTQLDWANLAPYWQQASLVHLAPLAQELTTIPPRKLFPQALIGLTAQGWLRHWDSSGRIQPKRWQPTPTELAQ IDALVVSDEDVAGDVQLVADWAQHCGLVAMTQGSRGATIWVNAEVQHVAAYPAQVSDPTGAGDVWAAAWFWRIQQGSSAL QAADWACQQAALQISGQLI >Mature_258_residues SLKYLLIGALTRDRTATGWQQGGTGTFAARALAAWGVATTIITPAHAKLIFDLPSTSTLVRLPSRATATFENRYQGDART QWLHAAPTQLDWANLAPYWQQASLVHLAPLAQELTTIPPRKLFPQALIGLTAQGWLRHWDSSGRIQPKRWQPTPTELAQI DALVVSDEDVAGDVQLVADWAQHCGLVAMTQGSRGATIWVNAEVQHVAAYPAQVSDPTGAGDVWAAAWFWRIQQGSSALQ AADWACQQAALQISGQLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28136; Mature: 28005
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKYLLIGALTRDRTATGWQQGGTGTFAARALAAWGVATTIITPAHAKLIFDLPSTSTL CCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCEE VRLPSRATATFENRYQGDARTQWLHAAPTQLDWANLAPYWQQASLVHLAPLAQELTTIPP EECCCCCHHHHHHHCCCCCHHEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCC RKLFPQALIGLTAQGWLRHWDSSGRIQPKRWQPTPTELAQIDALVVSDEDVAGDVQLVAD HHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHEEEEEECCCCCCCHHHHHHH WAQHCGLVAMTQGSRGATIWVNAEVQHVAAYPAQVSDPTGAGDVWAAAWFWRIQQGSSAL HHHHCCEEEEECCCCCCEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHH QAADWACQQAALQISGQLI HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SLKYLLIGALTRDRTATGWQQGGTGTFAARALAAWGVATTIITPAHAKLIFDLPSTSTL CCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCEE VRLPSRATATFENRYQGDARTQWLHAAPTQLDWANLAPYWQQASLVHLAPLAQELTTIPP EECCCCCHHHHHHHCCCCCHHEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCC RKLFPQALIGLTAQGWLRHWDSSGRIQPKRWQPTPTELAQIDALVVSDEDVAGDVQLVAD HHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHEEEEEECCCCCCCHHHHHHH WAQHCGLVAMTQGSRGATIWVNAEVQHVAAYPAQVSDPTGAGDVWAAAWFWRIQQGSSAL HHHHCCEEEEECCCCCCEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHH QAADWACQQAALQISGQLI HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA